100+ datasets found
  1. n

    Coronavirus (Covid-19) Data in the United States

    • nytimes.com
    • openicpsr.org
    • +1more
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    New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://www.nytimes.com/interactive/2020/us/coronavirus-us-cases.html
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    Dataset provided by
    New York Times
    Description

    The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

    Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

    We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

    The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

  2. Data from: COVID-19 Case Surveillance Public Use Data with Geography

    • data.cdc.gov
    • healthdata.gov
    • +5more
    application/rdfxml +5
    Updated Jul 9, 2024
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    CDC Data, Analytics and Visualization Task Force (2024). COVID-19 Case Surveillance Public Use Data with Geography [Dataset]. https://data.cdc.gov/Case-Surveillance/COVID-19-Case-Surveillance-Public-Use-Data-with-Ge/n8mc-b4w4
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    application/rssxml, csv, tsv, application/rdfxml, xml, jsonAvailable download formats
    Dataset updated
    Jul 9, 2024
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Authors
    CDC Data, Analytics and Visualization Task Force
    License

    https://www.usa.gov/government-workshttps://www.usa.gov/government-works

    Description

    Note: Reporting of new COVID-19 Case Surveillance data will be discontinued July 1, 2024, to align with the process of removing SARS-CoV-2 infections (COVID-19 cases) from the list of nationally notifiable diseases. Although these data will continue to be publicly available, the dataset will no longer be updated.

    Authorizations to collect certain public health data expired at the end of the U.S. public health emergency declaration on May 11, 2023. The following jurisdictions discontinued COVID-19 case notifications to CDC: Iowa (11/8/21), Kansas (5/12/23), Kentucky (1/1/24), Louisiana (10/31/23), New Hampshire (5/23/23), and Oklahoma (5/2/23). Please note that these jurisdictions will not routinely send new case data after the dates indicated. As of 7/13/23, case notifications from Oregon will only include pediatric cases resulting in death.

    This case surveillance public use dataset has 19 elements for all COVID-19 cases shared with CDC and includes demographics, geography (county and state of residence), any exposure history, disease severity indicators and outcomes, and presence of any underlying medical conditions and risk behaviors.

    Currently, CDC provides the public with three versions of COVID-19 case surveillance line-listed data: this 19 data element dataset with geography, a 12 data element public use dataset, and a 33 data element restricted access dataset.

    The following apply to the public use datasets and the restricted access dataset:

    Overview

    The COVID-19 case surveillance database includes individual-level data reported to U.S. states and autonomous reporting entities, including New York City and the District of Columbia (D.C.), as well as U.S. territories and affiliates. On April 5, 2020, COVID-19 was added to the Nationally Notifiable Condition List and classified as “immediately notifiable, urgent (within 24 hours)” by a Council of State and Territorial Epidemiologists (CSTE) Interim Position Statement (Interim-20-ID-01). CSTE updated the position statement on August 5, 2020, to clarify the interpretation of antigen detection tests and serologic test results within the case classification (Interim-20-ID-02). The statement also recommended that all states and territories enact laws to make COVID-19 reportable in their jurisdiction, and that jurisdictions conducting surveillance should submit case notifications to CDC. COVID-19 case surveillance data are collected by jurisdictions and reported voluntarily to CDC.

    For more information: NNDSS Supports the COVID-19 Response | CDC.

    COVID-19 Case Reports COVID-19 case reports are routinely submitted to CDC by public health jurisdictions using nationally standardized case reporting forms. On April 5, 2020, CSTE released an Interim Position Statement with national surveillance case definitions for COVID-19. Current versions of these case definitions are available at: https://ndc.services.cdc.gov/case-definitions/coronavirus-disease-2019-2021/. All cases reported on or after were requested to be shared by public health departments to CDC using the standardized case definitions for lab-confirmed or probable cases. On May 5, 2020, the standardized case reporting form was revised. States and territories continue to use this form.

    Data are Considered Provisional

    • The COVID-19 case surveillance data are dynamic; case reports can be modified at any time by the jurisdictions sharing COVID-19 data with CDC. CDC may update prior cases shared with CDC based on any updated information from jurisdictions. For instance, as new information is gathered about previously reported cases, health departments provide updated data to CDC. As more information and data become available, analyses might find changes in surveillance data and trends during a previously reported time window. Data may also be shared late with CDC due to the volume of COVID-19 cases.
    • Annual finalized data: To create the final NNDSS data used in the annual tables, CDC works carefully with the reporting jurisdictions to reconcile the data received during the year until each state or territorial epidemiologist confirms that the data from their area are correct.

    Access Addressing Gaps in Public Health Reporting of Race and Ethnicity for COVID-19, a report from the Council of State and Territorial Epidemiologists, to better understand the challenges in completing race and ethnicity data for COVID-19 and recommendations for improvement.

    Data Limitations

    To learn more about the limitations in using case surveillance data, visit FAQ: COVID-19 Data and Surveillance.

    Data Quality Assurance Procedures

    CDC’s Case Surveillance Section routinely performs data quality assurance procedures (i.e., ongoing corrections and logic checks to address data errors). To date, the following data cleaning steps have been implemented:

    • Questions that have been left unanswered (blank) on the case report form are reclassified to a Missing value, if applicable to the question. For example, in the question "Was the individual hospitalized?" where the possible answer choices include "Yes," "No," or "Unknown," the blank value is recoded to "Missing" because the case report form did not include a response to the question.
    • Logic checks are performed for date data. If an illogical date has been provided, CDC reviews the data with the reporting jurisdiction. For example, if a symptom onset date in the future is reported to CDC, this value is set to null until the reporting jurisdiction updates the date appropriately.
    • Additional data quality processing to recode free text data is ongoing. Data on symptoms, race, ethnicity, and healthcare worker status have been prioritized.

    Data Suppression

    To prevent release of data that could be used to identify people, data cells are suppressed for low frequency (<11 COVID-19 case records with a given values). Suppression includes low frequency combinations of case month, geographic characteristics (county and state of residence), and demographic characteristics (sex, age group, race, and ethnicity). Suppressed values are re-coded to the NA answer option; records with data suppression are never removed.

    Additional COVID-19 Data

    COVID-19 data are available to the public as summary or aggregate count files, including total counts of cases and deaths by state and by county. These and other COVID-19 data are available from multiple public locations: COVID Data Tracker; United States COVID-19 Cases and Deaths by State; COVID-19 Vaccination Reporting Data Systems; and COVID-19 Death Data and Resources.

    Notes:

    March 1, 2022: The "COVID-19 Case Surveillance Public Use Data with Geography" will be updated on a monthly basis.

    April 7, 2022: An adjustment was made to CDC’s cleaning algorithm for COVID-19 line level case notification data. An assumption in CDC's algorithm led to misclassifying deaths that were not COVID-19 related. The algorithm has since been revised, and this dataset update reflects corrected individual level information about death status for all cases collected to date.

    June 25, 2024: An adjustment

  3. COVID-19 Open Data

    • console.cloud.google.com
    Updated Jan 20, 2018
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    https://console.cloud.google.com/marketplace/browse?filter=partner:BigQuery%20Public%20Datasets%20Program (2018). COVID-19 Open Data [Dataset]. https://console.cloud.google.com/marketplace/product/bigquery-public-datasets/covid19-open-data
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    Dataset updated
    Jan 20, 2018
    Dataset provided by
    BigQueryhttps://cloud.google.com/bigquery
    Googlehttp://google.com/
    License

    Apache License, v2.0https://www.apache.org/licenses/LICENSE-2.0
    License information was derived automatically

    Description

    This repository contains the largest COVID-19 epidemiological database available in addition to a powerful set of expansive covariates. It includes open sourced data with a permissive license (enabling commercial use) relating to vaccinations, epidemiology, hospitalizations, demographics, economy, geography, health, mobility, government response, weather, and more. Moreover, the data merges daily time-series from hundreds of data sources at a fine spatial resolution, containing over 20,000 locations and using a consistent set of region keys. This dataset is available in both the US and EU regions of BigQuery at the following links: COVID-19 Open Data: US Region COVID-19 Open Data: EU Region All data in this dataset is retrieved automatically. When possible, data is retrieved directly from the relevant authorities, like a country's ministry of health. This dataset has significant public interest in light of the COVID-19 crisis. All bytes processed in queries against this dataset will be zeroed out, making this part of the query free. Data joined with the dataset will be billed at the normal rate to prevent abuse. After September 15, queries over these datasets will revert to the normal billing rate. This public dataset is hosted in Google BigQuery and is included in BigQuery's 1TB/mo of free tier processing. This means that each user receives 1TB of free BigQuery processing every month, which can be used to run queries on this public dataset. Watch this short video to learn how to get started quickly using BigQuery to access public datasets. What is BigQuery .

  4. Weekly United States COVID-19 Cases and Deaths by State - ARCHIVED

    • data.cdc.gov
    • data.virginia.gov
    • +2more
    application/rdfxml +5
    Updated Jun 1, 2023
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    CDC COVID-19 Response (2023). Weekly United States COVID-19 Cases and Deaths by State - ARCHIVED [Dataset]. https://data.cdc.gov/Case-Surveillance/Weekly-United-States-COVID-19-Cases-and-Deaths-by-/pwn4-m3yp
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    csv, application/rdfxml, xml, tsv, json, application/rssxmlAvailable download formats
    Dataset updated
    Jun 1, 2023
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Authors
    CDC COVID-19 Response
    License

    https://www.usa.gov/government-workshttps://www.usa.gov/government-works

    Description

    Reporting of new Aggregate Case and Death Count data was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. This dataset will receive a final update on June 1, 2023, to reconcile historical data through May 10, 2023, and will remain publicly available.

    Aggregate Data Collection Process Since the start of the COVID-19 pandemic, data have been gathered through a robust process with the following steps:

    • A CDC data team reviews and validates the information obtained from jurisdictions’ state and local websites via an overnight data review process.
    • If more than one official county data source exists, CDC uses a comprehensive data selection process comparing each official county data source, and takes the highest case and death counts respectively, unless otherwise specified by the state.
    • CDC compiles these data and posts the finalized information on COVID Data Tracker.
    • County level data is aggregated to obtain state and territory specific totals.
    This process is collaborative, with CDC and jurisdictions working together to ensure the accuracy of COVID-19 case and death numbers. County counts provide the most up-to-date numbers on cases and deaths by report date. CDC may retrospectively update counts to correct data quality issues.

    Methodology Changes Several differences exist between the current, weekly-updated dataset and the archived version:

    • Source: The current Weekly-Updated Version is based on county-level aggregate count data, while the Archived Version is based on State-level aggregate count data.
    • Confirmed/Probable Cases/Death breakdown:  While the probable cases and deaths are included in the total case and total death counts in both versions (if applicable), they were reported separately from the confirmed cases and deaths by jurisdiction in the Archived Version.  In the current Weekly-Updated Version, the counts by jurisdiction are not reported by confirmed or probable status (See Confirmed and Probable Counts section for more detail).
    • Time Series Frequency: The current Weekly-Updated Version contains weekly time series data (i.e., one record per week per jurisdiction), while the Archived Version contains daily time series data (i.e., one record per day per jurisdiction).
    • Update Frequency: The current Weekly-Updated Version is updated weekly, while the Archived Version was updated twice daily up to October 20, 2022.
    Important note: The counts reflected during a given time period in this dataset may not match the counts reflected for the same time period in the archived dataset noted above. Discrepancies may exist due to differences between county and state COVID-19 case surveillance and reconciliation efforts.

    Confirmed and Probable Counts In this dataset, counts by jurisdiction are not displayed by confirmed or probable status. Instead, confirmed and probable cases and deaths are included in the Total Cases and Total Deaths columns, when available. Not all jurisdictions report probable cases and deaths to CDC.* Confirmed and probable case definition criteria are described here:

    Council of State and Territorial Epidemiologists (ymaws.com).

    Deaths CDC reports death data on other sections of the website: CDC COVID Data Tracker: Home, CDC COVID Data Tracker: Cases, Deaths, and Testing, and NCHS Provisional Death Counts. Information presented on the COVID Data Tracker pages is based on the same source (total case counts) as the present dataset; however, NCHS Death Counts are based on death certificates that use information reported by physicians, medical examiners, or coroners in the cause-of-death section of each certificate. Data from each of these pages are considered provisional (not complete and pending verification) and are therefore subject to change. Counts from previous weeks are continually revised as more records are received and processed.

    Number of Jurisdictions Reporting There are currently 60 public health jurisdictions reporting cases of COVID-19. This includes the 50 states, the District of Columbia, New York City, the U.S. territories of American Samoa, Guam, the Commonwealth of the Northern Mariana Islands, Puerto Rico, and the U.S Virgin Islands as well as three independent countries in compacts of free association with the United States, Federated States of Micronesia, Republic of the Marshall Islands, and Republic of Palau. New York State’s reported case and death counts do not include New York City’s counts as they separately report nationally notifiable conditions to CDC.

    CDC COVID-19 data are available to the public as summary or aggregate count files, including total counts of cases and deaths, available by state and by county. These and other data on COVID-19 are available from multiple public locations, such as:

    https://www.cdc.gov/coronavirus/2019-ncov/cases-updates/cases-in-us.html

    https://www.cdc.gov/covid-data-tracker/index.html

    https://www.cdc.gov/coronavirus/2019-ncov/covid-data/covidview/index.html

    https://www.cdc.gov/coronavirus/2019-ncov/php/open-america/surveillance-data-analytics.html

    Additional COVID-19 public use datasets, include line-level (patient-level) data, are available at: https://data.cdc.gov/browse?tags=covid-19.

    Archived Data Notes:

    November 3, 2022: Due to a reporting cadence issue, case rates for Missouri counties are calculated based on 11 days’ worth of case count data in the Weekly United States COVID-19 Cases and Deaths by State data released on November 3, 2022, instead of the customary 7 days’ worth of data.

    November 10, 2022: Due to a reporting cadence change, case rates for Alabama counties are calculated based on 13 days’ worth of case count data in the Weekly United States COVID-19 Cases and Deaths by State data released on November 10, 2022, instead of the customary 7 days’ worth of data.

    November 10, 2022: Per the request of the jurisdiction, cases and deaths among non-residents have been removed from all Hawaii county totals throughout the entire time series. Cumulative case and death counts reported by CDC will no longer match Hawaii’s COVID-19 Dashboard, which still includes non-resident cases and deaths. 

    November 17, 2022: Two new columns, weekly historic cases and weekly historic deaths, were added to this dataset on November 17, 2022. These columns reflect case and death counts that were reported that week but were historical in nature and not reflective of the current burden within the jurisdiction. These historical cases and deaths are not included in the new weekly case and new weekly death columns; however, they are reflected in the cumulative totals provided for each jurisdiction. These data are used to account for artificial increases in case and death totals due to batched reporting of historical data.

    December 1, 2022: Due to cadence changes over the Thanksgiving holiday, case rates for all Ohio counties are reported as 0 in the data released on December 1, 2022.

    January 5, 2023: Due to North Carolina’s holiday reporting cadence, aggregate case and death data will contain 14 days’ worth of data instead of the customary 7 days. As a result, case and death metrics will appear higher than expected in the January 5, 2023, weekly release.

    January 12, 2023: Due to data processing delays, Mississippi’s aggregate case and death data will be reported as 0. As a result, case and death metrics will appear lower than expected in the January 12, 2023, weekly release.

    January 19, 2023: Due to a reporting cadence issue, Mississippi’s aggregate case and death data will be calculated based on 14 days’ worth of data instead of the customary 7 days in the January 19, 2023, weekly release.

    January 26, 2023: Due to a reporting backlog of historic COVID-19 cases, case rates for two Michigan counties (Livingston and Washtenaw) were higher than expected in the January 19, 2023 weekly release.

    January 26, 2023: Due to a backlog of historic COVID-19 cases being reported this week, aggregate case and death counts in Charlotte County and Sarasota County, Florida, will appear higher than expected in the January 26, 2023 weekly release.

    January 26, 2023: Due to data processing delays, Mississippi’s aggregate case and death data will be reported as 0 in the weekly release posted on January 26, 2023.

    February 2, 2023: As of the data collection deadline, CDC observed an abnormally large increase in aggregate COVID-19 cases and deaths reported for Washington State. In response, totals for new cases and new deaths released on February 2, 2023, have been displayed as zero at the state level until the issue is addressed with state officials. CDC is working with state officials to address the issue.

    February 2, 2023: Due to a decrease reported in cumulative case counts by Wyoming, case rates will be reported as 0 in the February 2, 2023, weekly release. CDC is working with state officials to verify the data submitted.

    February 16, 2023: Due to data processing delays, Utah’s aggregate case and death data will be reported as 0 in the weekly release posted on February 16, 2023. As a result, case and death metrics will appear lower than expected and should be interpreted with caution.

    February 16, 2023: Due to a reporting cadence change, Maine’s

  5. COVID-19 Time-Series Metrics by County and State (ARCHIVED)

    • data.chhs.ca.gov
    • data.ca.gov
    • +1more
    csv, xlsx, zip
    Updated Aug 28, 2024
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    California Department of Public Health (2024). COVID-19 Time-Series Metrics by County and State (ARCHIVED) [Dataset]. https://data.chhs.ca.gov/dataset/covid-19-time-series-metrics-by-county-and-state
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    csv(6223281), csv(7729431), csv(3313), xlsx(6471), xlsx(11305), csv(4836928), xlsx(7811), zipAvailable download formats
    Dataset updated
    Aug 28, 2024
    Dataset provided by
    California Department of Public Healthhttps://www.cdph.ca.gov/
    Description

    Note: This COVID-19 data set is no longer being updated as of December 1, 2023. Access current COVID-19 data on the CDPH respiratory virus dashboard (https://www.cdph.ca.gov/Programs/CID/DCDC/Pages/Respiratory-Viruses/RespiratoryDashboard.aspx) or in open data format (https://data.chhs.ca.gov/dataset/respiratory-virus-dashboard-metrics).

    As of August 17, 2023, data is being updated each Friday.

    For death data after December 31, 2022, California uses Provisional Deaths from the Center for Disease Control and Prevention’s National Center for Health Statistics (NCHS) National Vital Statistics System (NVSS). Prior to January 1, 2023, death data was sourced from the COVID-19 registry. The change in data source occurred in July 2023 and was applied retroactively to all 2023 data to provide a consistent source of death data for the year of 2023.

    As of May 11, 2023, data on cases, deaths, and testing is being updated each Thursday. Metrics by report date have been removed, but previous versions of files with report date metrics are archived below.

    All metrics include people in state and federal prisons, US Immigration and Customs Enforcement facilities, US Marshal detention facilities, and Department of State Hospitals facilities. Members of California's tribal communities are also included.

    The "Total Tests" and "Positive Tests" columns show totals based on the collection date. There is a lag between when a specimen is collected and when it is reported in this dataset. As a result, the most recent dates on the table will temporarily show NONE in the "Total Tests" and "Positive Tests" columns. This should not be interpreted as no tests being conducted on these dates. Instead, these values will be updated with the number of tests conducted as data is received.

  6. COVID-19 Reported Patient Impact and Hospital Capacity by State Timeseries...

    • catalog.data.gov
    • datahub.hhs.gov
    • +1more
    Updated May 4, 2024
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    U.S. Department of Health & Human Services (2024). COVID-19 Reported Patient Impact and Hospital Capacity by State Timeseries (RAW) [Dataset]. https://catalog.data.gov/dataset/covid-19-reported-patient-impact-and-hospital-capacity-by-state-timeseries-cf58c
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    Dataset updated
    May 4, 2024
    Dataset provided by
    United States Department of Health and Human Serviceshttp://www.hhs.gov/
    Description

    After May 3, 2024, this dataset and webpage will no longer be updated because hospitals are no longer required to report data on COVID-19 hospital admissions, and hospital capacity and occupancy data, to HHS through CDC’s National Healthcare Safety Network. Data voluntarily reported to NHSN after May 1, 2024, will be available starting May 10, 2024, at COVID Data Tracker Hospitalizations. The following dataset provides state-aggregated data for hospital utilization in a timeseries format dating back to January 1, 2020. These are derived from reports with facility-level granularity across three main sources: (1) HHS TeleTracking, (2) reporting provided directly to HHS Protect by state/territorial health departments on behalf of their healthcare facilities and (3) National Healthcare Safety Network (before July 15). The file will be updated regularly and provides the latest values reported by each facility within the last four days for all time. This allows for a more comprehensive picture of the hospital utilization within a state by ensuring a hospital is represented, even if they miss a single day of reporting. No statistical analysis is applied to account for non-response and/or to account for missing data. The below table displays one value for each field (i.e., column). Sometimes, reports for a given facility will be provided to more than one reporting source: HHS TeleTracking, NHSN, and HHS Protect. When this occurs, to ensure that there are not duplicate reports, prioritization is applied to the numbers for each facility. On April 27, 2022 the following pediatric fields were added: all_pediatric_inpatient_bed_occupied all_pediatric_inpatient_bed_occupied_coverage all_pediatric_inpatient_beds all_pediatric_inpatient_beds_coverage previous_day_admission_pediatric_covid_confirmed_0_4 previous_day_admission_pediatric_covid_confirmed_0_4_coverage previous_day_admission_pediatric_covid_confirmed_12_17 previous_day_admission_pediatric_covid_confirmed_12_17_coverage previous_day_admission_pediatric_covid_confirmed_5_11 previous_day_admission_pediatric_covid_confirmed_5_11_coverage previous_day_admission_pediatric_covid_confirmed_unknown previous_day_admission_pediatric_covid_confirmed_unknown_coverage staffed_icu_pediatric_patients_confirmed_covid staffed_icu_pediatric_patients_confirmed_covid_coverage staffed_pediatric_icu_bed_occupancy staffed_pediatric_icu_bed_occupancy_coverage total_staffed_pediatric_icu_beds total_staffed_pediatric_icu_beds_coverage On January 19, 2022, the following fields have been added to this dataset: inpatient_beds_used_covid inpatient_beds_used_covid_coverage On September 17, 2021, this data set has had the following fields added: icu_patients_confirmed_influenza, icu_patients_confirmed_influenza_coverage, previous_day_admission_influenza_confirmed, previous_day_admission_influenza_confirmed_coverage, previous_day_deaths_covid_and_influenza, previous_day_deaths_covid_and_influenza_coverage, previous_day_deaths_influenza, previous_day_deaths_influenza_coverage, total_patients_hospitalized_confirmed_influenza, total_patients_hospitalized_confirmed_influenza_and_covid, total_patients_hospitalized_confirmed_influenza_and_covid_coverage, total_patients_hospitalized_confirmed_influenza_coverage On September 13, 2021, this data set has had the following fields added: on_hand_supply_therapeutic_a_casirivimab_imdevimab_courses, on_hand_supply_therapeutic_b_bamlanivimab_courses, on_hand_supply_therapeutic_c_bamlanivimab_etesevimab_courses, previous_week_therapeutic_a_casirivimab_imdevimab_courses_used, previous_week_therapeutic_b_bamlanivimab_courses_used, previous_week_therapeutic_c_bamlanivima

  7. j

    Coronavirus COVID-19 Global Cases by the Center for Systems Science and...

    • systems.jhu.edu
    • github.com
    • +1more
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    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE), Coronavirus COVID-19 Global Cases by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University (JHU) [Dataset]. https://systems.jhu.edu/research/public-health/ncov/
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    Dataset provided by
    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE)
    Area covered
    Global
    Description

    2019 Novel Coronavirus COVID-19 (2019-nCoV) Visual Dashboard and Map:
    https://www.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6

    • Confirmed Cases by Country/Region/Sovereignty
    • Confirmed Cases by Province/State/Dependency
    • Deaths
    • Recovered

    Downloadable data:
    https://github.com/CSSEGISandData/COVID-19

    Additional Information about the Visual Dashboard:
    https://systems.jhu.edu/research/public-health/ncov

  8. c

    COVID-19 Data platform partners

    • covid19dataportal.org
    Updated Apr 19, 2020
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    EMBL-EBI (2020). COVID-19 Data platform partners [Dataset]. https://www.covid19dataportal.org/
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    Dataset updated
    Apr 19, 2020
    Dataset authored and provided by
    EMBL-EBI
    License

    https://www.ebi.ac.uk/about/terms-of-use/https://www.ebi.ac.uk/about/terms-of-use/

    Description

    The European COVID-19 Data Platform is developed and operated in a partnership of many institutions.

  9. c

    COVID-19 related Data submissions

    • covid19dataportal.org
    Updated Apr 19, 2020
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    EMBL-EBI (2020). COVID-19 related Data submissions [Dataset]. https://www.covid19dataportal.org/
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    Dataset updated
    Apr 19, 2020
    Dataset authored and provided by
    EMBL-EBI
    License

    https://www.ebi.ac.uk/about/terms-of-use/https://www.ebi.ac.uk/about/terms-of-use/

    Description

    COVID-19 related data submissions, including: Viral, non-human and cell line sequence data, Human molecular biology data, Linked viral and human molecular biology data, Viral and non-human proteomics data, Structural biology data, Viral and non-human molecular interaction data, metabolomics, compounds and drug targets data, clinical and epidemiological data and non-biological data.

  10. i

    COVID-19 Case Demographics Daily Trend

    • hub.mph.in.gov
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    COVID-19 Case Demographics Daily Trend [Dataset]. https://hub.mph.in.gov/dataset/covid-19-case-demographics-daily-trend
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    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Note: 11/1/2023: Publication of the COVID data will be delayed because of technical difficulties. Note: 9/20/2023: With the end of the federal emergency and reporting requirements continuing to evolve, the Indiana Department of Health will no longer publish and refresh the COVID-19 datasets after November 15, 2023 - one final dataset publication will continue to be available. Note: 5/10/2023: Due to a technical issue updates are delayed for COVID data. New files will be published as soon as they are available. Note: 3/22/2023: Due to a technical issue updates are delayed for COVID data. New files will be published as soon as they are available. Note: 3/15/2023 test data will be removed from the COVID dashboards and HUB files in recognition of the fact that widespread use of at-home tests and a decrease in lab testing no longer provides an accurate representation of COVID-19 spread. Number of Indiana COVID-19 cases and deaths by age group, gender, race and ethnicity by day. All data displayed is preliminary and subject to change as more information is reported to IDOH. Expect historical data to change as data is reported to IDOH. Historical Changes: 1/11/2023: Due to a technical issue updates are delayed for COVID data. New files will be published as soon as they are available. 1/5/2023: Due to a technical issue the COVID datasets were not updated on 1/4/23. Updates will be published as soon as they are available. 9/29/22: Due to a technical difficulty, the weekly COVID datasets were not generated yesterday. They will be updated with current data today - 9/29 - and may result in a temporary discrepancy with the numbers published on the dashboard until the normal weekly refresh resumes 10/5. 9/27/2022: As of 9/28, the Indiana Department of Health (IDOH) is moving to a weekly COVID update for the dashboard and all associated datasets to continue to provide trend data that is applicable and usable for our partners and the public. This is to maintain alignment across the nation as states move to weekly updates. 2/10/2022: Data was not published on 2/9/2022 due to a technical issue, but updated data was released 2/10/2022. 12/30/21: This dataset has been updated, and should continue to receive daily updates. 12/15/21: The file has been adjusted with data through 12/13, and regular updates will resume to it today. 11/12/2021: Historical re-infections have been added to the case counts for all pertinent COVID datasets back to 9/1/2021 and new re-infections will be added to the total case counts as they are reported in accordance with CDC guidance. 06/23/2021: COVID Hub files will no longer be updated on Saturdays. The normal refresh of these files has been changed to Mon-Fri. 06/10/2021: COVID Hub files will no longer be updated on Sundays. The normal refresh of these files has been changed to Mon-Sat. 6/03/2021 : A batch of historical negative and positive test results added 16,492 historical tests administered, 7,082 tested individuals, and 765 historical cases to today's counts. These cases are not included in the new positive counts but have been added to the total positive cases. Today’s total case counts include historical cases received from other states. 2/4/2021 : Today’s dataset now includes 1,507 historical deaths identified through an audit of 2020 and 2021 COVID death records and test results.

  11. Master COVID-19 Dataset

    • catalog.data.gov
    • datasets.ai
    Updated Jun 25, 2024
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    data.usaid.gov (2024). Master COVID-19 Dataset [Dataset]. https://catalog.data.gov/dataset/master-covid-19-dataset
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    Dataset updated
    Jun 25, 2024
    Dataset provided by
    United States Agency for International Developmenthttp://usaid.gov/
    Description

    This Master COVID-19 Dataset contains a combination of primary datasets (originally identified by the COVID-19 Task Force Strategic Analysis team and currently maintained by the PPL Metrics Team) grouped by factors, cleaned, and ready for on-demand analytics products. This list is organized into seven Factors, covering the range of first-order and second-order impacts, host country and donor responses, underlying vulnerabilities, and broader country contextual factors that are influencing and influenced by the COVID-19 crisis. The Factors are delineated by those pertaining to first-order impacts and second-order impacts, even though the two issue sets are highly interrelated. Note that this resource is internal to USAID.

  12. COVID-19 Daily Counts of Cases, Hospitalizations, and Deaths

    • data.cityofnewyork.us
    • catalog.data.gov
    application/rdfxml +5
    Updated Jan 4, 2025
    + more versions
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    Department of Health and Mental Hygiene (DOHMH) (2025). COVID-19 Daily Counts of Cases, Hospitalizations, and Deaths [Dataset]. https://data.cityofnewyork.us/Health/COVID-19-Daily-Counts-of-Cases-Hospitalizations-an/rc75-m7u3
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    csv, application/rssxml, tsv, xml, application/rdfxml, jsonAvailable download formats
    Dataset updated
    Jan 4, 2025
    Dataset provided by
    New York City Department of Health and Mental Hygienehttps://nyc.gov/health
    Authors
    Department of Health and Mental Hygiene (DOHMH)
    Description

    Daily count of NYC residents who tested positive for SARS-CoV-2, who were hospitalized with COVID-19, and deaths among COVID-19 patients.

    Note that this dataset currently pulls from https://raw.githubusercontent.com/nychealth/coronavirus-data/master/trends/data-by-day.csv on a daily basis.

  13. d

    COVID-19 County Level Data - Archive

    • catalog.data.gov
    • data.ct.gov
    • +1more
    Updated Aug 12, 2023
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    data.ct.gov (2023). COVID-19 County Level Data - Archive [Dataset]. https://catalog.data.gov/dataset/covid-19-county-level-data
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    Dataset updated
    Aug 12, 2023
    Dataset provided by
    data.ct.gov
    Description

    Covid-19 Daily metrics at the county level As of 6/1/2023, this data set is no longer being updated. The COVID-19 Data Report is posted on the Open Data Portal every day at 3pm. The report uses data from multiple sources, including external partners; if data from external partners are not received by 3pm, they are not available for inclusion in the report and will not be displayed. Data that are received after 3pm will still be incorporated and published in the next report update. The cumulative number of COVID-19 cases (cumulative_cases) includes all cases of COVID-19 that have ever been reported to DPH. The cumulative number of COVID_19 cases in the last 7 days (cases_7days) only includes cases where the specimen collection date is within the past 7 days. While most cases are reported to DPH within 48 hours of specimen collection, there are a small number of cases that routinely are delayed, and will have specimen collection dates that fall outside of the rolling 7 day reporting window. Additionally, reporting entities may submit correction files to contribute historic data during initial onboarding or to address data quality issues; while this is rare, these correction files may cause a large amount of data from outside of the current reporting window to be uploaded in a single day; this would result in the change in cumulative_cases being much larger than the value of cases_7days. On June 4, 2020, the US Department of Health and Human Services issued guidance requiring the reporting of positive and negative test results for SARS-CoV-2; this guidance expired with the end of the federal PHE on 5/11/2023, and negative SARS-CoV-2 results were removed from the List of Reportable Laboratory Findings. DPH will no longer be reporting metrics that were dependent on the collection of negative test results, specifically total tests performed or percent positivity. Positive antigen and PCR/NAAT results will continue to be reportable.

  14. d

    Données relatives à l’épidémie de COVID-19 en France : vue d’ensemble

    • data.gouv.fr
    csv, json
    Updated Sep 13, 2023
    + more versions
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    Ministère des Solidarités et de la Santé (2023). Données relatives à l’épidémie de COVID-19 en France : vue d’ensemble [Dataset]. https://www.data.gouv.fr/en/datasets/donnees-relatives-a-lepidemie-de-covid-19-en-france-vue-densemble/
    Explore at:
    json(501241), csv(47464)Available download formats
    Dataset updated
    Sep 13, 2023
    Dataset authored and provided by
    Ministère des Solidarités et de la Santé
    License

    https://www.etalab.gouv.fr/licence-ouverte-open-licencehttps://www.etalab.gouv.fr/licence-ouverte-open-licence

    Area covered
    France
    Description

    Point d'attention : les données sont désormais disponibles sur ce jeu de données. Tableau de bord de suivi de l'épidémie Les données sont exposées sur l'onglet vue d'ensemble du tableau de bord de suivi de l'épidémie disponible sur gouvernement.fr. Ce dernier présente depuis le 28 mars 2020 les données relatives à l’épidémie de COVID-19 en France. Cet outil dont le code source est libre, a été développé sous l’impulsion d’Etalab et avec la collaboration de la société civile. Il propose une vision consolidée des données officielles disponibles. Description du jeu de données Les données contenue dans le jeu de données sont publiées quotidiennement. Données sur le nombre de cas confirmés Cas confirmés : nombre cumulé de cas COVID-19 confirmé par un test positif. Données relatives à la situation hospitalière Hospitalisations : nombre de patients actuellement hospitalisés pour COVID-19. Nouveaux patients hospitalisés : nombre de nouveaux patients hospitalisés au cours des dernières 24 h. Retours à domicile : nombre cumulé de patients ayant été hospitalisés pour COVID-19 et de retour à domicile en raison de l'amélioration de leur état de santé. Réanimation : nombre de patients actuellement en réanimation ou soins intensifs. Nouveaux patients en réanimation : nombre de nouveaux patients admis en réanimation au cours des dernières 24 h. Données relatives au décès pour cause de COVID-19 Cumul des décès : cumul des décès constaté à l'hôpital et en EPHAD et EMS. Décès à l'hôpital : nombre cumulé de décès de patients hospitalisés pour COVID-19 depuis le 1er mars 2020. Cas confirmés en EHPAD et EMS : nombre de cas confirmés par test PCR en EHPAD et EMS. Ce chiffre est inclus dans le nombre total de cas confirmés. Décès en EHPAD : nombre cumulé de décès en EHPAD et EMS (Établissements médico-sociaux). Points d'attentions : Les méthodes de collecte des données ont évoluées dans le temps ; Au cours de l'été 2020, les données n'ont pas été publiées durant les week-end et jours fériés. Ressources Consulter le tableau de bord Consulter l'inventaire des données relatives au COVID-19 sur data.gouv.fr Consulter les données de Santé publique France Consulter les données du ministère des Solidarités et de la Santé

  15. COVID-19 Patient Data

    • catalog.data.gov
    • s.cnmilf.com
    Updated Nov 27, 2024
    + more versions
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    California Department of State Hospitals (2024). COVID-19 Patient Data [Dataset]. https://catalog.data.gov/dataset/covid-19-patient-data-9604c
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    Dataset updated
    Nov 27, 2024
    Dataset provided by
    California Department of State Hospitals
    Description

    DSH COVID-19 Patient Testing: Last updated -11/07/2024 DSH COVID-19 Patient Data reports on patient positives and testing counts at the facility level for DSH. The table reports on the following data fields: Total patients that tested positive for COVID-19 since 5/16/2020 Patients newly positive for COVID-19 in the last 14 days Patient deaths while patient was positive for COVID-19 since 5/30/2020 Total number of tests administered since 3/23/2020 Table Notes: COVID-19 test results for patients include DSH patients who are tested while receiving treatment at an outside medical facility. Data has been de-identified in accordance with CalHHS Data De-identification Guidelines. Counts between 1-10 are masked with "<11". Includes Patients Under Investigation (PUIs) testing and proactive testing of asymptomatic patients for surveillance of geriatric, medically fragile, and skilled nursing facility units and for patients upon admission, re-admission, or discharge. Includes all individuals who were positive for COVID-19 at time of death, regardless of underlying health conditions or whether the cause of death has been confirmed to be COVID-19 related illness. Metro-Norwalk is additional COVID-19 surge space and technically a branch location that is part of DSH Metropolitan Hospital.

  16. COVID-19 State Profile Report - North Carolina

    • catalog.data.gov
    • healthdata.gov
    Updated Jul 26, 2023
    + more versions
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    U.S. Department of Health & Human Services (2023). COVID-19 State Profile Report - North Carolina [Dataset]. https://catalog.data.gov/dataset/covid-19-state-profile-report-north-carolina
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    Dataset updated
    Jul 26, 2023
    Dataset provided by
    United States Department of Health and Human Serviceshttp://www.hhs.gov/
    Area covered
    North Carolina
    Description

    After over two years of public reporting, the State Profile Report will no longer be produced and distributed after February 2023. The final release was on February 23, 2023. We want to thank everyone who contributed to the design, production, and review of this report and we hope that it provided insight into the data trends throughout the COVID-19 pandemic. Data about COVID-19 will continue to be updated at CDC’s COVID Data Tracker. The State Profile Report (SPR) is generated by the Data Strategy and Execution Workgroup in the Joint Coordination Cell, in collaboration with the White House. It is managed by an interagency team with representatives from multiple agencies and offices (including the United States Department of Health and Human Services (HHS), the Centers for Disease Control and Prevention, the HHS Assistant Secretary for Preparedness and Response, and the Indian Health Service). The SPR provides easily interpretable information on key indicators for each state, down to the county level. It is a weekly snapshot in time that: Focuses on recent outcomes in the last seven days and changes relative to the month prior Provides additional contextual information at the county level for each state, and includes national level information Supports rapid visual interpretation of results with color thresholds

  17. D

    Post-COVID Conditions

    • data.cdc.gov
    • data.virginia.gov
    • +3more
    application/rdfxml +5
    Updated Oct 4, 2024
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    NCHS/DHIS (2024). Post-COVID Conditions [Dataset]. https://data.cdc.gov/NCHS/Post-COVID-Conditions/gsea-w83j
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    application/rdfxml, csv, json, xml, tsv, application/rssxmlAvailable download formats
    Dataset updated
    Oct 4, 2024
    Dataset authored and provided by
    NCHS/DHIS
    License

    https://www.usa.gov/government-workshttps://www.usa.gov/government-works

    Description

    As part of an ongoing partnership with the Census Bureau, the National Center for Health Statistics (NCHS) recently added questions to assess the prevalence of post-COVID-19 conditions (long COVID), on the experimental Household Pulse Survey. This 20-minute online survey was designed to complement the ability of the federal statistical system to rapidly respond and provide relevant information about the impact of the coronavirus pandemic in the U.S. Data collection began on April 23, 2020. Beginning in Phase 3.5 (on June 1, 2022), NCHS included questions about the presence of symptoms of COVID that lasted three months or longer. Phase 3.5 will continue with a two-weeks on, two-weeks off collection and dissemination approach.

    Estimates on this page are derived from the Household Pulse Survey and show the percentage of adults aged 18 and over who a) as a proportion of the U.S. population, the percentage of adults who EVER experienced post-COVID conditions (long COVID). These adults had COVID and had some symptoms that lasted three months or longer; b) as a proportion of adults who said they ever had COVID, the percentage who EVER experienced post-COVID conditions; c) as a proportion of the U.S. population, the percentage of adults who are CURRENTLY experiencing post-COVID conditions. These adults had COVID, had long-term symptoms, and are still experiencing symptoms; d) as a proportion of adults who said they ever had COVID, the percentage who are CURRENTLY experiencing post-COVID conditions; and e) as a proportion of the U.S. population, the percentage of adults who said they ever had COVID.

  18. d

    NC COVID-19 Cases & Deaths

    • catalog.data.gov
    • data.townofcary.org
    • +1more
    Updated Oct 19, 2024
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    NC Department of Health and Human Services (2024). NC COVID-19 Cases & Deaths [Dataset]. https://catalog.data.gov/dataset/nc-covid-19-cases-deaths
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    Dataset updated
    Oct 19, 2024
    Dataset provided by
    NC Department of Health and Human Services
    Area covered
    North Carolina
    Description

    This dataset contains counts of COVID-19 cases and deaths in North Carolina from March 2, 2020 to May 31, 2021. The data was extracted from NC Department of Health and Human Services' NC COVID-19 dashboard: Daily Cases and Deaths Metrics. This dataset is an archive - it is not being updated. Data Source: NCDHHS (2021). Daily Cases and Deaths Metrics (Version 1.3) [Data set]. https://covid19.ncdhhs.gov/dashboard/data-behind-dashboards

  19. n

    COVID-19 Open Research Dataset

    • neuinfo.org
    • dknet.org
    Updated Jan 29, 2022
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    (2022). COVID-19 Open Research Dataset [Dataset]. http://identifiers.org/RRID:SCR_018336
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    Dataset updated
    Jan 29, 2022
    Description

    Collection of scholarly articles about COVID-19 and coronavirus family of viruses for use by global research community. Dataset is updated on weekly basis.

  20. COVID-19 Community Mobility Reports

    • google.com
    • google.com.tr
    • +4more
    csv, pdf
    Updated Oct 17, 2022
    + more versions
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    Google (2022). COVID-19 Community Mobility Reports [Dataset]. https://www.google.com/covid19/mobility/
    Explore at:
    csv, pdfAvailable download formats
    Dataset updated
    Oct 17, 2022
    Dataset authored and provided by
    Googlehttp://google.com/
    Description

    As global communities responded to COVID-19, we heard from public health officials that the same type of aggregated, anonymized insights we use in products such as Google Maps would be helpful as they made critical decisions to combat COVID-19. These Community Mobility Reports aimed to provide insights into what changed in response to policies aimed at combating COVID-19. The reports charted movement trends over time by geography, across different categories of places such as retail and recreation, groceries and pharmacies, parks, transit stations, workplaces, and residential.

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New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://www.nytimes.com/interactive/2020/us/coronavirus-us-cases.html

Coronavirus (Covid-19) Data in the United States

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Dataset provided by
New York Times
Description

The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

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