100+ datasets found
  1. a

    Invasive Ductal Carcinoma (IDC) Histology Image Dataset

    • academictorrents.com
    bittorrent
    Updated Feb 24, 2019
    + more versions
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    None (2019). Invasive Ductal Carcinoma (IDC) Histology Image Dataset [Dataset]. https://academictorrents.com/details/e40bd59ab08861329ce3c418be191651f35e2ffa
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    bittorrentAvailable download formats
    Dataset updated
    Feb 24, 2019
    Authors
    None
    License

    https://academictorrents.com/nolicensespecifiedhttps://academictorrents.com/nolicensespecified

    Description

    Invasive Ductal Carcinoma (IDC) is the most common subtype of all breast cancers. To assign an aggressiveness grade to a whole mount sample, pathologists typically focus on the regions which contain the IDC. As a result, one of the common pre-processing steps for automatic aggressiveness grading is to delineate the exact regions of IDC inside of a whole mount slide. Dataset Description The original dataset consisted of 162 whole mount slide images of Breast Cancer (BCa) specimens scanned at 40x. From that, 277,524 patches of size 50 x 50 were extracted (198,738 IDC negative and 78,786 IDC positive). Each patch’s file name is of the format: u_xX_yY_classC.png — > example 10253_idx5_x1351_y1101_class0.png Where u is the patient ID (10253_idx5), X is the x-coordinate of where this patch was cropped from, Y is the y-coordinate of where this patch was cropped from, and C indicates the class where 0 is non-IDC and 1 is IDC.

  2. Collection of textures in colorectal cancer histology

    • zenodo.org
    • explore.openaire.eu
    • +1more
    zip
    Updated Jan 24, 2020
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    Jakob Nikolas Kather; Frank Gerrit Zöllner; Francesco Bianconi; Susanne M Melchers; Lothar R Schad; Timo Gaiser; Alexander Marx; Cleo-Aron Weis; Jakob Nikolas Kather; Frank Gerrit Zöllner; Francesco Bianconi; Susanne M Melchers; Lothar R Schad; Timo Gaiser; Alexander Marx; Cleo-Aron Weis (2020). Collection of textures in colorectal cancer histology [Dataset]. http://doi.org/10.5281/zenodo.53169
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    zipAvailable download formats
    Dataset updated
    Jan 24, 2020
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Jakob Nikolas Kather; Frank Gerrit Zöllner; Francesco Bianconi; Susanne M Melchers; Lothar R Schad; Timo Gaiser; Alexander Marx; Cleo-Aron Weis; Jakob Nikolas Kather; Frank Gerrit Zöllner; Francesco Bianconi; Susanne M Melchers; Lothar R Schad; Timo Gaiser; Alexander Marx; Cleo-Aron Weis
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Content

    This data set represents a collection of textures in histological images of human colorectal cancer. It contains two files:

    1. "Kather_texture_2016_image_tiles_5000.zip": a zipped folder containing 5000 histological images of 150 * 150 px each (74 * 74 µm). Each image belongs to exactly one of eight tissue categories (specified by the folder name).
    2. "Kather_texture_2016_larger_images_10.zip": a zipped folder containing 10 larger histological images of 5000 x 5000 px each. These images contain more than one tissue type.

    Image format

    All images are RGB, 0.495 µm per pixel, digitized with an Aperio ScanScope (Aperio/Leica biosystems), magnification 20x. Histological samples are fully anonymized images of formalin-fixed paraffin-embedded human colorectal adenocarcinomas (primary tumors) from our pathology archive (Institute of Pathology, University Medical Center Mannheim, Heidelberg University, Mannheim, Germany).

    Ethics statement

    All experiments were approved by the institutional ethics board (medical ethics board II, University Medical Center Mannheim, Heidelberg University, Germany; approval 2015-868R-MA). The institutional ethics board waived the need for informed consent for this retrospective analysis of anonymized samples. All experiments were carried out in accordance with the approved guidelines and with the Declaration of Helsinki.

    More information / data usage

    For more information, please refer to the following article. Please cite this article when using the data set.

    Kather JN, Weis CA, Bianconi F, Melchers SM, Schad LR, Gaiser T, Marx A, Zollner F: Multi-class texture analysis in colorectal cancer histology (2016), Scientific Reports (in press)

    Contact

    For questions, please contact:
    Dr. Jakob Nikolas Kather
    http://orcid.org/0000-0002-3730-5348
    ResearcherID: D-4279-2015

  3. SE Marine Mammal Histology/Tissue data

    • fisheries.noaa.gov
    • catalog.data.gov
    • +1more
    Updated Jan 9, 2025
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    Southeast Fisheries Science Center (2025). SE Marine Mammal Histology/Tissue data [Dataset]. https://www.fisheries.noaa.gov/inport/item/26507
    Explore at:
    Dataset updated
    Jan 9, 2025
    Dataset provided by
    Southeast Fisheries Science Center
    Time period covered
    1992 - Jun 9, 2125
    Area covered
    Description

    Tissue samples are collected from stranded marine mammals in the Southeastern United States. These tissue samples are examined histologically and evaluated to identify diseases, parasites, and other factors that may result in morbidity and mortality of marine mammals. These data document the different types of diseases or other health effects seen in stranded marine mammals.

  4. u

    Registered histology, MRI, and manual annotations of over 300 brain regions...

    • rdr.ucl.ac.uk
    txt
    Updated Oct 6, 2023
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    Eugenio Iglesias Gonzalez; Adria Casamitjana; Alessia Atzeni; Benjamin Billot; David Thomas; Emily Blackburn; James Hughes; Juri Althonayan; Loic Peter; Matteo Mancini; Nellie Robinson; Peter Schmidt; Shauna Crampsie (2023). Registered histology, MRI, and manual annotations of over 300 brain regions in 5 human hemispheres (data from ERC Starting Grant 677697 "BUNGEE-TOOLS") [Dataset]. http://doi.org/10.5522/04/24243835.v1
    Explore at:
    txtAvailable download formats
    Dataset updated
    Oct 6, 2023
    Dataset provided by
    University College London
    Authors
    Eugenio Iglesias Gonzalez; Adria Casamitjana; Alessia Atzeni; Benjamin Billot; David Thomas; Emily Blackburn; James Hughes; Juri Althonayan; Loic Peter; Matteo Mancini; Nellie Robinson; Peter Schmidt; Shauna Crampsie
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    Summary:

    This repository includes data related to the ERC Starting Grant project 677697: "Building Next-Generation Computational Tools for High Resolution Neuroimaging Studies" (BUNGEE-TOOLS). It includes: (a) Dense histological sections from five human hemispheres with manual delineations of >300 brain regions; (b) Corresponding ex vivo MRI scans; (c) Dissection photographs; (d) A spatially aligned version of the dataset; (e) A probabilistic atlas built from the hemispheres; and (f) Code to apply the atlas to automated segmentation of in vivo MRI scans.

    More detailed description on what this dataset includes:

    Data files and Python code for Bayesian segmentation of human brain MRI based on a next-generation, high-resolution histological atlas: "Next-Generation histological atlas for high-resolution segmentation of human brain MRI" A Casamitjana et al., in preparation. This repository contains a set of zip files, each corresponding to one directory. Once decompressed, each directory has a readme.txt file explaining its contents. The list of zip files / compressed directories is:

    • 3dAtlas.zip: nifti files with summary imaging volumes of the probabilistic atlas.

    • BlockFacePhotoBlocks.zip: nifti files with the blackface photographs acquired during tissue sectioning, reconstructed into 3D volumes (in RGB).

    • Histology.zip: jpg files with the LFB and H&E stained sections.

    • HistologySegmentations.zip: 2D nifti files with the segmentations of the histological sections.

    • MRI.zip: ex vivo T2-weighted MRI scans and corresponding FreeSurfer processing files

    • SegmentationCode.zip: contains the the Python code and data files that we used to segment brain MRI scans and obtain the results presented in the article (for reproducibility purposes). Note that it requires an installation of FreeSurfer. Also, note that the code is also maintained in FreeSurfer (but may not produce exactly the same results): https://surfer.nmr.mgh.harvard.edu/fswiki/HistoAtlasSegmentation

    • WholeHemispherePhotos.zip: photographs of the specimens prior to dissection

    • WholeSlicePhotos.zip: photographs of the tissue slabs prior to blocking.

    We also note that the registered images for the five cases can be found in GitHub: https://github.com/UCL/BrainAtlas-P41-16 https://github.com/UCL/BrainAtlas-P57-16 https://github.com/UCL/BrainAtlas-P58-16 https://github.com/UCL/BrainAtlas-P85-18 https://github.com/UCL/BrainAtlas-EX9-19
    These registered images can be interactively explored with the following web interface: https://github-pages.ucl.ac.uk/BrainAtlas/#/atlas

  5. The global histology embedding system market size is USD XX million in 2024....

    • cognitivemarketresearch.com
    pdf,excel,csv,ppt
    Updated Apr 7, 2025
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    Cognitive Market Research (2025). The global histology embedding system market size is USD XX million in 2024. [Dataset]. https://www.cognitivemarketresearch.com/histology-embedding-system-market-report
    Explore at:
    pdf,excel,csv,pptAvailable download formats
    Dataset updated
    Apr 7, 2025
    Dataset authored and provided by
    Cognitive Market Research
    License

    https://www.cognitivemarketresearch.com/privacy-policyhttps://www.cognitivemarketresearch.com/privacy-policy

    Time period covered
    2021 - 2033
    Area covered
    Global
    Description

    According to Cognitive Market Research, the global histology embedding system market size will be USD XX million in 2024. It will expand at a compound annual growth rate (CAGR) of 4.00% from 2024 to 2031.

    North America held the major market share for more than 40% of the global revenue with a market size of USD XX million in 2024 and will grow at a compound annual growth rate (CAGR) of 2.2% from 2024 to 2031.
    Europe accounted for a market share of over 30% of the global revenue with a market size of USD XX million.
    Asia Pacific held a market share of around 23% of the global revenue with a market size of USD XX million in 2024 and will grow at a compound annual growth rate (CAGR) of 6.0% from 2024 to 2031.
    Latin America had a market share of more than 5% of the global revenue with a market size of USD XX million in 2024 and will grow at a compound annual growth rate (CAGR) of 3.4% from 2024 to 2031.
    Middle East and Africa had a market share of around 2% of the global revenue and was estimated at a market size of USD XX million in 2024 and will grow at a compound annual growth rate (CAGR) of 3.7% from 2024 to 2031.
    The automated histology system held the highest histology embedding system market revenue share in 2024.
    

    Market Dynamics of Histology Embedding System Market

    Key Drivers for Histology Embedding System Market

    Rising chronic diseases to Increase the Demand Globally

    The histology embedding system market has experienced growth due to rise in chronic diseases. Histology embedding systems are crucial for preparing tissue samples for microscopic examination, which is essential in diagnosing and researching these conditions. As chronic diseases become more common due to factors like aging populations and lifestyle changes, the demand for accurate and efficient histological analysis grows. This increased demand for diagnostic precision and research into disease mechanisms fuels the adoption of advanced embedding systems, driving market growth.

    Continuous innovations in systems to Propel Market Growth

    The histology embedding system market has witnessed steady growth, driven by continuous innovations in systems. Advances in technology lead to the development of automated and semi-automated systems that improve throughput and accuracy in tissue processing. Innovations such as improved temperature control, user-friendly interfaces, and integration with digital pathology platforms streamline workflows and reduce manual intervention. Additionally, developments in software and data management facilitate better tracking and documentation. These innovations address evolving research and clinical needs, making modern systems more efficient and reliable, which fuels demand in the histology embedding system market.

    Restraint Factor for the Histology Embedding System Market

    High costs of equipment to Limit the Sales

    The high costs of equipments constrain the growth of histology embedding system market. These advanced systems, essential for precise tissue processing, often involve sophisticated technology and materials, driving up their price. This can make it challenging for healthcare providers, especially in developing regions, to adopt and integrate these systems into their workflows. Additionally, the high initial investment required may deter potential buyers, limiting the market's growth and adoption rate.

    Impact of Covid-19 on the Histology Embedding System Market

    The covid-19 significantly impacted the market, causing disruptions in the global supply chain and delaying elective surgeries and routine diagnostics, which reduced demand for histology equipment. However, the pandemic also highlighted the importance of pathology labs in diagnosing and managing diseases, leading to increased investments in healthcare infrastructure. This, coupled with the growing focus on cancer diagnostics and research, is expected to drive market recovery and growth as healthcare systems stabilize post-pandemic. Introduction of the Histology Embedding System Market

    A Histology Embedding System is a laboratory instrument used to encase biological tissue samples in a solid medium, typically paraffin wax, to preserve and support the tissue's structure for microscopic examination. This process is essential for producing high-quality histological sections for diagnostic and research purposes. The rise in chronic diseases, innovations in histology embedding systems, growing re...

  6. Histology and Cytology Market - Size & Growth

    • mordorintelligence.com
    pdf,excel,csv,ppt
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    Mordor Intelligence, Histology and Cytology Market - Size & Growth [Dataset]. https://www.mordorintelligence.com/industry-reports/histology-and-cytology-market
    Explore at:
    pdf,excel,csv,pptAvailable download formats
    Dataset authored and provided by
    Mordor Intelligence
    License

    https://www.mordorintelligence.com/privacy-policyhttps://www.mordorintelligence.com/privacy-policy

    Time period covered
    2019 - 2030
    Area covered
    Global
    Description

    The Histology And Cytology Market report segments the industry into By Type Of Examination (Histology, Cytology), By Test Type (Microscopy Tests, Molecular Genetics Tests, Flow Cytomtery), By End User (Hospitals And Clinics, Academic And Research Institutes, Other End Users), and Geography (North America, Europe, Asia-Pacific, Middle East And Africa, South America). Get five years of historic data and five-year forecasts.

  7. f

    Tumor histology and multiplicity.

    • figshare.com
    xls
    Updated May 31, 2023
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    Claire B. Pollock; Yuzhi Yin; Hongyan Yuan; Xiao Zeng; Sruthi King; Xin Li; Levy Kopelovich; Chris Albanese; Robert I. Glazer (2023). Tumor histology and multiplicity. [Dataset]. http://doi.org/10.1371/journal.pone.0016215.t001
    Explore at:
    xlsAvailable download formats
    Dataset updated
    May 31, 2023
    Dataset provided by
    PLOS ONE
    Authors
    Claire B. Pollock; Yuzhi Yin; Hongyan Yuan; Xiao Zeng; Sruthi King; Xin Li; Levy Kopelovich; Chris Albanese; Robert I. Glazer
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    P = 0.0125 vs. untreated WT mice for histological differences.*P = 0.0205 vs. untreated PDK1 mice for histological differences.Wild-type (WT) and MMTV-PDK1 transgenic mice (PDK1) were fed either standard rodent chow or chow supplemented with 0.005% (w/w) GW501516 (GW). GW501516 treatment produced a significant change in the percentage of adenosquamous/squamous carcinomas. There were no significant differences in tumor multiplicity between groups.

  8. Z

    BACH Dataset : Grand Challenge on Breast Cancer Histology images

    • data.niaid.nih.gov
    Updated Jan 31, 2020
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    Eloy, Catarina (2020). BACH Dataset : Grand Challenge on Breast Cancer Histology images [Dataset]. https://data.niaid.nih.gov/resources?id=zenodo_3632034
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    Dataset updated
    Jan 31, 2020
    Dataset provided by
    Polónia, António
    Eloy, Catarina
    Aguiar, Paulo
    License

    Attribution-NonCommercial-NoDerivs 4.0 (CC BY-NC-ND 4.0)https://creativecommons.org/licenses/by-nc-nd/4.0/
    License information was derived automatically

    Description

    i3S Annotated Datasets on Digital Pathology

    WELCOME

    In an effort to contribute and push forward the field of Digital Pathology, Ipatimup and INEB, two major research institutions in Portugal, have joined forces in the construction of histology datasets to support grand Challenges on automatic classification of tissue malignancy. The researchers/pathologists responsible for the datasets are:

    António Polónia (MD), Ipatimup/i3S

    Catarina Eloy (MD, PhD), Ipatimup/i3S

    Paulo Aguiar (PhD), INEB/i3S

    This specific page refers to the Grand Challenge on Breast Cancer Histology images, or BACH Challenge

    THE BACH CHALLENGE DATASET

    ICIAR 2018 - Grand Challenge on Breast Cancer Histology images [Challenge organized by Teresa Araújo, Guilherme Aresta, António Polónia, Catarina Eloy and Paulo Aguiar]

    For detailed information visit: https://iciar2018-challenge.grand-challenge.org/home/

    THIS DATASET IS PUBLICALLY AVAILABLE UNDER A CREATIVE COMMONS CC BY-NC-ND LICENSE (ATTRIBUTION-NONCOMMERCIAL-NODERIVS) ESSENCIALLY, YOU ARE GRANTED ACCESS TO THE DATASET FOR USE IN YOUR RESEARCH AS LONG AS YOU CREDIT OUR WORK/PUBLICATIONS(*), BUT YOU CANNOT CHANGE THEM IN ANY WAY OR USE THEM COMMERCIALLY

    (*) Aresta, Guilherme, et al. "BACH: Grand challenge on breast cancer histology images." Medical image analysis (2019).

    (*) Araújo, Teresa, et al. "Classification of breast cancer histology images using convolutional neural networks." PloS one 12.6 (2017): e0177544.

    (*) Fondón, Irene, et al. "Automatic classification of tissue malignancy for breast carcinoma diagnosis." Computers in biology and medicine 96 (2018): 41-51.

  9. Identifying Cell Nuclei from Histology Images

    • kaggle.com
    zip
    Updated Jul 16, 2019
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    Sandhaya (2019). Identifying Cell Nuclei from Histology Images [Dataset]. https://www.kaggle.com/sandhaya4u/histology-image-dataset
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    zip(0 bytes)Available download formats
    Dataset updated
    Jul 16, 2019
    Authors
    Sandhaya
    Description

    # # # Machine Learning Model for identifying Cell Nuclei from Histology Images

    Machine learning model for identifying cell nuclei from histology images. The model having the ability to generalize across a variety of lighting conditions, cell types, magnifications, and imaging modalities.Imagine speeding up research for almost every disease, from lung cancer and heart disease to rare disorders. The Data Science Bowl offers to data scientist / practitioner a most ambitious mission i.e. create an algorithm to automate nucleus detection & create an algorithm to detect all non overlapped nuclei from the given test data i.e. It should have the capability for instance segmentation. We’ve all seen people suffer from diseases like cancer, heart disease, chronic obstructive pulmonary disease, Alzheimer’s, and diabetes. Many have seen their loved ones pass away. Think how many lives would be transformed if cures came faster. By automating nucleus detection, you could help unlock cures faster—from rare disorders to the common cold

    # ## Why nuclei?

    Identifying the cells’ nuclei is the starting point for most analyses because most of the human body’s 30 trillion cells contain a nucleus full of DNA, the genetic code that programs each cell. Identifying nuclei allows researchers to identify each individual cell in a sample, and by measuring how cells react to various treatments, the researcher can understand the underlying biological processes at work.By participating, teams will work to automate the process of identifying nuclei, which will allow for more efficient drug testing, shortening the 10 years it takes for each new drug to come to market

    Acknowledgements

    The success and final outcome of this project required a lot of guidance and assistance from many people and I am extremely privileged to have got this all along the completion of my project. All that I have done is only due to such supervision and assistance and I would not forget to thank them.I owe my deep gratitude to our project guide C - DAC Noida, who took keen interest on my project work and guided me all along, till the completion of our project work by providing all the necessary information for developing a good system.

    Inspiration

    The Data Science Bowl, presented by Booz Allen and Kaggle, is the world’s premier data science for social good competition. The Data Science Bowl brings together data scientists, technologists, domain experts, and organizations to take on the world’s challenges with data and technology. It’s a platform through which people can harness their passion, unleash their curiosity, and amplify their impact to effect change on a global scale

  10. h

    histology cytology Report

    • datainsightsmarket.com
    doc, pdf, ppt
    Updated Jun 1, 2025
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    Data Insights Market (2025). histology cytology Report [Dataset]. https://www.datainsightsmarket.com/reports/histology-cytology-1493400
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    ppt, doc, pdfAvailable download formats
    Dataset updated
    Jun 1, 2025
    Dataset authored and provided by
    Data Insights Market
    License

    https://www.datainsightsmarket.com/privacy-policyhttps://www.datainsightsmarket.com/privacy-policy

    Time period covered
    2025 - 2033
    Area covered
    CA
    Variables measured
    Market Size
    Description

    The global histology and cytology market is experiencing robust growth, driven by several key factors. The increasing prevalence of chronic diseases such as cancer, which necessitates extensive diagnostic testing, is a major catalyst. Technological advancements, including the development of automated systems, digital pathology, and AI-powered image analysis, are significantly improving diagnostic accuracy and efficiency, thereby boosting market demand. Furthermore, the rising geriatric population, with its associated higher susceptibility to chronic illnesses, is fueling the need for more sophisticated diagnostic tools. The market is also witnessing a growing adoption of point-of-care testing and telehealth solutions, enabling faster diagnosis and treatment, particularly in remote areas. This trend enhances accessibility and efficiency within healthcare systems, positively impacting market expansion. Despite these positive factors, the market faces some challenges. High equipment costs and the need for skilled professionals to operate and interpret results can hinder widespread adoption, especially in resource-constrained settings. Strict regulatory requirements and reimbursement policies in different regions also influence market growth. However, ongoing technological innovations and collaborative efforts between healthcare providers and technology companies are addressing these challenges, leading to improved affordability and accessibility of histology and cytology services. The market segmentation reveals significant opportunities within specialized testing areas and emerging markets, paving the way for sustained growth throughout the forecast period. Competitive landscape analysis shows key players like Abbott Laboratories, BD, Danaher, Roche, Hologic, Sysmex, Thermo Fisher Scientific, and Trivitron Healthcare vying for market share through innovation, strategic partnerships, and acquisitions.

  11. A Detailed Analysis of Histology and Cytology Consumables Market by Kits and...

    • futuremarketinsights.com
    pdf
    Updated Aug 10, 2023
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    Future Market Insights (2023). A Detailed Analysis of Histology and Cytology Consumables Market by Kits and Reagents, Enzymes, and Others 2023 to 2033 [Dataset]. https://www.futuremarketinsights.com/reports/histology-and-cytology-consumables-supplies-market
    Explore at:
    pdfAvailable download formats
    Dataset updated
    Aug 10, 2023
    Dataset authored and provided by
    Future Market Insights
    License

    https://www.futuremarketinsights.com/privacy-policyhttps://www.futuremarketinsights.com/privacy-policy

    Time period covered
    2023 - 2033
    Area covered
    Worldwide
    Description

    The global histology and cytology consumables market is anticipated to be worth US$ 8,637.6 million in 2023. The market is expected to expand at a CAGR of 10.2% between 2023 and 2033. Increased demand for the detection of cell and tissue features and an increase in the global occurrence of cell-based disorders such as cancer are projected to drive the market over the forecast period.

    Report AttributeKey Statistics
    Expected Market Value (2023)US$ 8,637.6 million
    Anticipated Forecast Value (2033)US$ 22,833 million
    Projected Growth Rate (2023 to 2033)10.2% CAGR

    Region-wise Analysis

    CountriesMarket CAGR % (2023 to 2033)
    China14.5%
    India11.9%
    RegionEurope
    Market Share % (2022)28.1%
    RegionNorth America
    Market Share % (2022)40%

    Category wise insights

    SegmentKits and Reagents
    Market Share % (2022)55.2%

    Report Scope

    Report AttributeDetails
    Growth RateCAGR of 10.2% from 2023 to 2033
    Market Value in 2023US$ 8,637.6 million
    Market Value in 2033US$ 22,833.0 million
    Base Year for Estimation2022
    Historical Data2018 to 2022
    Forecast Period2023 to 2033
    Quantitative UnitsRevenue in US$ million and CAGR from 2023 to 2033
    Report CoverageRevenue Forecast, Company Ranking, Competitive Landscape, Growth Factors, Trends, and Pricing Analysis
    Segments Covered
    • Product Type
    • Application
    • End User
    • Region
    Regions Covered
    • North America
    • Latin America
    • Europe
    • Asia Pacific
    • The Middle East and Africa
    Key Countries Profiled
    • The United States
    • Canada
    • Brazil
    • Mexico
    • Germany
    • The United Kingdom
    • France
    • Spain
    • Italy
    • China
    • Japan
    • South Korea
    • Malaysia
    • Singapore
    • Australia
    • New Zealand
    • GCC Countries
    • South Africa
    • Israel
    Key Companies Profiled
    • Thermo Fisher Scientific, Inc.
    • Danaher Corporation
    • Abbott Laboratories
    • Becton Dickinson and Company
    • F. Hoffmann-La Roche Ltd
    • Promega Corporation
    • Agilent Technologies Inc.
    • Roche Holding AG
    • Merck KGaA
    • Allergan, Plc.
    • PerkinElmer, Inc.
    CustomizationAvailable Upon Request
  12. d

    Histology data in support of manuscript "Pre-mining trace element and...

    • catalog.data.gov
    • search.dataone.org
    • +1more
    Updated Jul 6, 2024
    + more versions
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    U.S. Geological Survey (2024). Histology data in support of manuscript "Pre-mining trace element and radiation exposure to biota from a breccia pipe uranium mine in the Grand Canyon (Arizona, USA) watershed" [Dataset]. https://catalog.data.gov/dataset/histology-data-in-support-of-manuscript-pre-mining-trace-element-and-radiation-exposure-to
    Explore at:
    Dataset updated
    Jul 6, 2024
    Dataset provided by
    United States Geological Surveyhttp://www.usgs.gov/
    Area covered
    United States, Arizona
    Description

    The risks to wildlife and humans from uranium (U) mining to the Grand Canyon watershed are largely unknown. In addition to U, other co-occurring ore constituents contribute to risks to biological receptors depending on their toxicological profiles. This data was collected to characterize the pre-mining concentrations of total arsenic (As), cadmium (Cd), copper (Cu), lead (Pb), mercury (Hg), nickel (Ni), selenium (Se), thallium (Tl), U, and zinc (Zn); radiation levels; and histopathologies in biota (vegetation, invertebrates, amphibians, birds, and mammals) at the Canyon Mine.

  13. Histology and Cytology Market by Application and Geography - Forecast and...

    • technavio.com
    Updated Sep 15, 2021
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    Technavio (2021). Histology and Cytology Market by Application and Geography - Forecast and Analysis 2021-2025 [Dataset]. https://www.technavio.com/report/histology-and-cytology-market-industry-analysis
    Explore at:
    Dataset updated
    Sep 15, 2021
    Dataset provided by
    TechNavio
    Authors
    Technavio
    License

    https://www.technavio.com/content/privacy-noticehttps://www.technavio.com/content/privacy-notice

    Time period covered
    2021 - 2025
    Area covered
    Global
    Description

    Snapshot img

    The histology and cytology market has the potential to grow by USD 12.06 billion during 2021-2025, and the market’s growth momentum will accelerate at a CAGR of 13.47%.

    This histology and cytology market research report provides valuable insights on the post COVID-19 impact on the market, which will help companies evaluate their business approaches. Furthermore, this report extensively covers market segmentation by application (drug discovery and designing, clinical diagnostics, and research) and geography (North America, Europe, APAC, South America, and MEA). The histology and cytology market report also offers information on several market vendors, including 3DHISTECH Ltd., Abbott Laboratories, Becton Dickinson and Co., Danaher Corp., F. Hoffmann-La Roche Ltd., Hologic Inc., Koninklijke Philips NV, Olympus Corp., PHC Holdings Corp., and Trivitron Healthcare among others.

    What will the Histology and Cytology Market Size be in 2021?

    Browse TOC and LoE with selected illustrations and example pages of Histology and Cytology Market

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    Histology and Cytology Market: Key Drivers and Trends

    The growing cancer incidence and raising awareness about cancer screening in the emerging economies is notably driving the histology and cytology market growth, although factors such as complications associated with histology and cytology procedures may impede market growth. Our research analysts have studied the historical data and deduced the key market drivers and the COVID-19 pandemic impact on the histology and cytology industry. The holistic analysis of the drivers will help in predicting end goals and refining marketing strategies to gain a competitive edge.

    This histology and cytology market analysis report also provides detailed information on other upcoming trends and challenges that will have a far-reaching effect on the market growth. The actionable insights on the trends and challenges will help companies evaluate and develop growth strategies for 2021-2025.

    Who are the Major Histology And Cytology Market Vendors?

    The report analyzes the market’s competitive landscape and offers information on several market vendors, including:

    3DHISTECH Ltd.
    Abbott Laboratories
    Becton Dickinson and Co.
    Danaher Corp.
    F. Hoffmann-La Roche Ltd.
    Hologic Inc.
    Koninklijke Philips NV
    Olympus Corp.
    PHC Holdings Corp.
    Trivitron Healthcare
    

    The vendor landscape of the histology and cytology market entails successful business strategies deployed by the vendors. The histology and cytology market is fragmented and the vendors are deploying various organic and inorganic growth strategies to compete in the market.

    To make the most of the opportunities and recover from post COVID-19 impact, market vendors should focus more on the growth prospects in the fast-growing segments, while maintaining their positions in the slow-growing segments.

    Download a free sample of the histology and cytology market forecast report for insights on complete key vendor profiles. The profiles include information on the production, sustainability, and prospects of the leading companies.

    Which are the Key Regions for Histology and Cytology Market?

    For more insights on the market share of various regions Request for a FREE sample now!

    38% of the market’s growth will originate from North America during the forecast period. The US and Canada are the key markets for histology and cytology in North America.

    The report offers an up-to-date analysis of the geographical composition of the market. North America has been recording a significant growth rate and is expected to offer several growth opportunities to market vendors during the forecast period. Automation in histology and cytology will facilitate the histology and cytology market growth in North America over the forecast period. The report offers an up-to-date analysis of the geographical composition of the market, competitive intelligence, and regional opportunities in store for vendors.

    What are the Revenue-generating Application Segments in the Histology and Cytology Market?

    To gain further insights on the market contribution of various segments Request for a FREE sample

    The histology and cytology market share growth by the drug discovery and designing segment has been significant. This report provides insights on the impact of the unprecedented outbreak of COVID-19 on market segments. Through these insights, you can safely deduce transformation patterns in consumer behavior, which is crucial to gauge segment-wise revenue growth during 2021-2025 and embrace technologies to improve business efficiency.

    This report provides an accurate prediction of the contribution of all the segments to the growth of the histology and cytology market size. Furthermore, our analysts have indicated actionable market insights on post COVID-19 impact on each segment, which is cr

  14. Colorectal Histology MNIST

    • kaggle.com
    Updated Sep 19, 2018
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    K Scott Mader (2018). Colorectal Histology MNIST [Dataset]. https://www.kaggle.com/kmader/colorectal-histology-mnist/notebooks
    Explore at:
    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Sep 19, 2018
    Dataset provided by
    Kaggle
    Authors
    K Scott Mader
    Description

    Overview

    The dataset serves as a much more interesting MNIST or CIFAR10 problem for biologists by focusing on histology tiles from patients with colorectal cancer. In particular, the data has 8 different classes of tissue (but Cancer/Not Cancer can also be an interesting problem).

    Challenge

    • Classify tiles correctly into one of the eight classes
    • Which classes are most frequently confused?
    • What features can be used (like texture, see scikit-image) to improve classification?
    • How can these models be applied to the much larger 5000x5000 models? How can this be done efficiently?

    Acknowledgements

    The dataset has been copied from Zenodo: https://zenodo.org/record/53169#.W6HwwP4zbOQ with DOI

    made by: Kather, Jakob Nikolas; Zöllner, Frank Gerrit; Bianconi, Francesco; Melchers, Susanne M; Schad, Lothar R; Gaiser, Timo; Marx, Alexander; Weis, Cleo-Aron

    The copy here is to make it more accessible to Kaggle users and allow kernels providing basic analysis of the data

    Content

    This data set represents a collection of textures in histological images of human colorectal cancer. It contains two files:

    "Kather_texture_2016_image_tiles_5000.zip": a zipped folder containing 5000 histological images of 150 * 150 px each (74 * 74 µm). Each image belongs to exactly one of eight tissue categories (specified by the folder name). "Kather_texture_2016_larger_images_10.zip": a zipped folder containing 10 larger histological images of 5000 x 5000 px each. These images contain more than one tissue type. Image format

    All images are RGB, 0.495 µm per pixel, digitized with an Aperio ScanScope (Aperio/Leica biosystems), magnification 20x. Histological samples are fully anonymized images of formalin-fixed paraffin-embedded human colorectal adenocarcinomas (primary tumors) from our pathology archive (Institute of Pathology, University Medical Center Mannheim, Heidelberg University, Mannheim, Germany).

    Ethics statement

    All experiments were approved by the institutional ethics board (medical ethics board II, University Medical Center Mannheim, Heidelberg University, Germany; approval 2015-868R-MA). The institutional ethics board waived the need for informed consent for this retrospective analysis of anonymized samples. All experiments were carried out in accordance with the approved guidelines and with the Declaration of Helsinki.

    More information / data usage

    For more information, please refer to the following article. Please cite this article when using the data set.

    Kather JN, Weis CA, Bianconi F, Melchers SM, Schad LR, Gaiser T, Marx A, Zollner F: Multi-class texture analysis in colorectal cancer histology (2016), Scientific Reports (in press)

    Contact

    For questions, please contact: Dr. Jakob Nikolas Kather http://orcid.org/0000-0002-3730-5348 ResearcherID: D-4279-2015

  15. H

    Histology And Cytology Market Report

    • archivemarketresearch.com
    doc, pdf, ppt
    Updated Nov 22, 2024
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    Archive Market Research (2024). Histology And Cytology Market Report [Dataset]. https://www.archivemarketresearch.com/reports/histology-and-cytology-market-3322
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    doc, ppt, pdfAvailable download formats
    Dataset updated
    Nov 22, 2024
    Dataset authored and provided by
    Archive Market Research
    License

    https://www.archivemarketresearch.com/privacy-policyhttps://www.archivemarketresearch.com/privacy-policy

    Time period covered
    2025 - 2033
    Area covered
    global
    Variables measured
    Market Size
    Description

    The Histology And Cytology Market size was valued at USD 18.44 billion in 2023 and is projected to reach USD 49.50 billion by 2032, exhibiting a CAGR of 15.15 % during the forecasts period. The Histology and Cytology Market refers to the procedure involved in studying tissue samples as well as cells in an effort to diagnose diseases coupled with the examination of the make-up of tissues and cells. Some applications include pathologic analysis of various tissues to diagnose malignant tissue, search for an infectious organism, or determination of changes in tissue due to disease or trauma. Suitability extends to pathology laboratories, hospitals, academic and research institutions, as well as biotechnology industries. Some of the important trends in this markets include the adoption of automation with a focus on the digital pathology, the global interest for more accurate diagnosis with the aim of identifying specific treatments accordingly and demand in high-throughput drug screening. For details, trends include the combination of molecular pathology with traditional histology and cytology, broadening of the application of telepathology for consultative purposes, and the use of AI and machine learning approaches to support pathologists in interpretation.

  16. Test Dataset for Whole Slide Image Registration

    • zenodo.org
    • data.niaid.nih.gov
    bin, tiff
    Updated Jul 19, 2024
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    Romain Guiet; Romain Guiet; Nicolas Chiaruttini; Nicolas Chiaruttini (2024). Test Dataset for Whole Slide Image Registration [Dataset]. http://doi.org/10.5281/zenodo.4680455
    Explore at:
    tiff, binAvailable download formats
    Dataset updated
    Jul 19, 2024
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Romain Guiet; Romain Guiet; Nicolas Chiaruttini; Nicolas Chiaruttini
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description
  17. Tissue Processing System for Histology Market Report | Global Forecast From...

    • dataintelo.com
    csv, pdf, pptx
    Updated Jan 7, 2025
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    Dataintelo (2025). Tissue Processing System for Histology Market Report | Global Forecast From 2025 To 2033 [Dataset]. https://dataintelo.com/report/tissue-processing-system-for-histology-market
    Explore at:
    pptx, pdf, csvAvailable download formats
    Dataset updated
    Jan 7, 2025
    Dataset authored and provided by
    Dataintelo
    License

    https://dataintelo.com/privacy-and-policyhttps://dataintelo.com/privacy-and-policy

    Time period covered
    2024 - 2032
    Area covered
    Global
    Description

    Tissue Processing System for Histology Market Outlook



    The global market size for Tissue Processing Systems for Histology was valued at approximately $450 million in 2023 and is expected to reach nearly $710 million by 2032, growing at a CAGR of around 5.2% during the forecast period. This market growth is primarily driven by advancements in histology techniques, increasing prevalence of chronic diseases, and the rising adoption of automated tissue processing systems in clinical and research settings.



    One of the significant growth factors fueling the Tissue Processing System for Histology market is the increasing incidence of cancer and chronic diseases worldwide. With the rising prevalence of such conditions, there is a growing need for accurate, efficient, and high-throughput histological examinations to aid in early diagnosis and treatment planning. Automated tissue processing systems enable pathologists to process a larger number of tissue samples with increased precision, thereby improving diagnostic accuracy and patient outcomes.



    Technological advancements in tissue processing systems have also played a crucial role in market growth. Innovations such as automated and semi-automated tissue processors, which offer improved speed, consistency, and reduced human error, are gaining significant traction. These advancements are particularly beneficial in high-volume laboratories where large sample sizes are processed daily. The integration of advanced software and digital solutions with tissue processors further enhances workflow efficiency and data management, contributing to market expansion.



    The market is also driven by the increasing focus on personalized medicine and targeted therapies. Histology plays a vital role in the characterization of tissue samples, which is essential for the development of personalized treatment plans. As research in precision medicine progresses, the demand for high-quality tissue processing systems that can provide detailed histological data is expected to rise. Additionally, the expanding biopharmaceutical industry, with its emphasis on drug discovery and development, further boosts the demand for advanced tissue processing systems.



    The role of Histopathology Testing Equipment Consumables is becoming increasingly vital in the histology market. These consumables, which include reagents, slides, and other essential materials, are crucial for the preparation and analysis of tissue samples. As the demand for precise and reliable histopathological examinations grows, so does the need for high-quality consumables that ensure accuracy and consistency in test results. The integration of advanced consumables with automated tissue processing systems enhances the overall efficiency of histological workflows, supporting the growing emphasis on personalized medicine and targeted therapies. This trend underscores the importance of consumables in achieving optimal diagnostic outcomes and advancing clinical research.



    Regionally, North America holds a significant share of the Tissue Processing System for Histology market, propelled by the presence of a well-established healthcare infrastructure, high healthcare expenditure, and ongoing research activities. However, the Asia Pacific region is anticipated to witness the fastest growth during the forecast period. This growth can be attributed to the increasing healthcare investments, rising awareness about advanced diagnostic techniques, and the expanding biopharmaceutical sector in countries such as China and India.



    Product Type Analysis



    The Tissue Processing System for Histology market can be segmented by product type into Automated Tissue Processors, Semi-Automated Tissue Processors, and Manual Tissue Processors. Automated Tissue Processors hold the largest market share due to their ability to handle a high volume of samples with minimal human intervention, thereby reducing the risk of errors and increasing efficiency. These systems are equipped with advanced features such as programmable protocols, real-time monitoring, and automated reagent management, which enhance their adoption in clinical and research laboratories.



    Semi-Automated Tissue Processors are also gaining popularity, particularly in medium-sized laboratories where a balance between automation and manual intervention is required. These systems offer flexibility in handling different types of tissue samples and allow for partial automation of the

  18. Histology And Cytology Market Report | Global Forecast From 2025 To 2033

    • dataintelo.com
    csv, pdf, pptx
    Updated Jan 7, 2025
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    Dataintelo (2025). Histology And Cytology Market Report | Global Forecast From 2025 To 2033 [Dataset]. https://dataintelo.com/report/histology-and-cytology-market
    Explore at:
    csv, pptx, pdfAvailable download formats
    Dataset updated
    Jan 7, 2025
    Dataset authored and provided by
    Dataintelo
    License

    https://dataintelo.com/privacy-and-policyhttps://dataintelo.com/privacy-and-policy

    Time period covered
    2024 - 2032
    Area covered
    Global
    Description

    Histology and Cytology Market Outlook



    The global histology and cytology market size was valued at approximately USD 15 billion in 2023 and is projected to reach USD 28 billion by 2032, growing at a compound annual growth rate (CAGR) of around 7%. The rising prevalence of chronic diseases, coupled with advancements in diagnostic technologies, is significantly driving the growth of this market. Moreover, increased awareness about early disease detection and the growing demand for personalized medicine are also contributing to the market's expansion.



    One of the primary growth factors for the histology and cytology market is the increasing incidence of cancer worldwide. According to the World Health Organization, cancer is one of the leading causes of death globally, and early detection is crucial for effective treatment. Histology and cytology techniques play a pivotal role in the early diagnosis of various cancers, thereby boosting the demand for these services. Additionally, governments and healthcare organizations are implementing numerous cancer screening programs, further fueling market growth.



    Technological advancements in histology and cytology are another significant growth driver. Innovations such as digital pathology, automated staining, and advanced imaging techniques have revolutionized the field, making diagnostic processes more accurate and efficient. These technological improvements have enhanced the ability to analyze tissue and cellular samples, leading to better diagnostic outcomes. Furthermore, the integration of artificial intelligence in pathology is expected to provide new opportunities for market growth by enhancing diagnostic precision and workflow efficiency.



    Increasing investment in healthcare infrastructure, particularly in emerging economies, is also contributing to the histology and cytology market's growth. Countries like China and India are witnessing substantial improvements in their healthcare systems, driven by government initiatives and rising healthcare expenditure. This has led to the establishment of new diagnostic laboratories and the modernization of existing facilities, thereby increasing the adoption of histology and cytology techniques. Additionally, the growing aging population in these regions is further driving the demand for diagnostic services, as older individuals are more susceptible to chronic diseases requiring thorough diagnostic evaluations.



    Cytology Staining Solution plays a crucial role in enhancing the visibility of cellular components, which is essential for accurate diagnosis in cytological examinations. These solutions are specifically formulated to highlight different cellular structures, aiding pathologists in identifying abnormalities such as cancerous cells. The effectiveness of cytology staining solutions is pivotal in ensuring that even the most subtle cellular changes are detected, thereby facilitating early diagnosis and treatment. With advancements in staining techniques, these solutions have become more sophisticated, offering improved precision and consistency in results. The demand for high-quality cytology staining solutions is increasing as laboratories strive to enhance diagnostic accuracy and efficiency. Moreover, the development of automated staining systems has further streamlined the process, reducing the time required for sample preparation and analysis.



    On a regional level, North America currently holds the largest market share, attributed to the presence of well-established healthcare infrastructure, high adoption of advanced diagnostic technologies, and significant investment in research and development. However, the Asia Pacific region is expected to witness the highest growth rate during the forecast period. This rapid growth can be attributed to the increasing prevalence of chronic diseases, rising healthcare expenditure, and growing awareness about early disease detection in countries like China and India.



    Product Type Analysis



    The histology and cytology market can be segmented by product type into instruments and consumables. Instruments include equipment such as tissue processors, slide strainers, and microscopes, which are essential for performing histological and cytological examinations. Consumables comprise reagents, kits, and other laboratory supplies required for sample preparation and analysis. The demand for both instruments and consumables is rising due to the increasing number of diagnostic tests being conducted worldwide.</p&

  19. Histology Sample Preparation System Market Report | Global Forecast From...

    • dataintelo.com
    csv, pdf, pptx
    Updated Jan 7, 2025
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    Dataintelo (2025). Histology Sample Preparation System Market Report | Global Forecast From 2025 To 2033 [Dataset]. https://dataintelo.com/report/global-histology-sample-preparation-system-market
    Explore at:
    pdf, csv, pptxAvailable download formats
    Dataset updated
    Jan 7, 2025
    Dataset authored and provided by
    Dataintelo
    License

    https://dataintelo.com/privacy-and-policyhttps://dataintelo.com/privacy-and-policy

    Time period covered
    2024 - 2032
    Area covered
    Global
    Description

    Histology Sample Preparation System Market Outlook



    As of 2023, the global histology sample preparation system market size is valued at approximately USD 1.7 billion, with a projected CAGR of 6.5% from 2024 to 2032. By the end of 2032, the market is expected to reach a valuation of around USD 2.9 billion. This growth can be attributed to several factors, including the increasing incidence of cancer and other chronic diseases, technological advancements in histology techniques, and a rising demand for early and accurate disease diagnosis.



    One of the key growth factors for this market is the growing prevalence of cancer worldwide. According to the World Health Organization, cancer is one of the leading causes of death globally, with millions of new cases diagnosed each year. Histology sample preparation systems are crucial in the diagnosis and study of cancer, as they enable the detailed examination of tissue samples to identify abnormalities at the cellular level. This rising incidence of cancer is driving the demand for advanced histology equipment and consumables, thus boosting market growth.



    Additionally, there is a significant push towards personalized medicine, which requires precise and detailed histological analysis to tailor treatments to individual patients. Advanced histology sample preparation systems allow for high-resolution imaging and molecular analysis of tissue samples, facilitating the identification of specific biomarkers and genetic mutations. This precision in diagnosis and treatment is becoming increasingly important in modern healthcare, thereby driving the adoption of sophisticated histology systems.



    The market's growth is also fueled by continuous advancements in histological techniques and technologies. Innovations such as automated tissue processors, advanced staining techniques, and digital pathology solutions are enhancing the efficiency and accuracy of histological analysis. These technological advancements not only improve diagnostic outcomes but also reduce turnaround times, making histology sample preparation systems more accessible and appealing to healthcare providers and research institutions.



    Histology Instrument advancements are playing a pivotal role in modernizing the sample preparation process. These instruments, such as automated tissue processors and embedding centers, are designed to enhance the precision and efficiency of histological analysis. By integrating automation and digital imaging technologies, histology instruments are reducing manual labor and minimizing human error, which is crucial for achieving consistent and high-quality results. The demand for these sophisticated instruments is rising as laboratories and diagnostic centers seek to improve diagnostic accuracy and streamline workflows. As a result, the histology instrument segment is expected to witness significant growth, driven by the need for advanced solutions in both clinical and research settings.



    Regionally, North America holds the largest market share for histology sample preparation systems, driven by a well-established healthcare infrastructure, significant investment in medical research, and high healthcare expenditure. However, the Asia Pacific region is expected to exhibit the highest growth rate during the forecast period, with a CAGR of approximately 7.2%. This growth is attributed to increasing healthcare awareness, rising prevalence of chronic diseases, and expanding healthcare infrastructure in countries like China and India.



    Product Type Analysis



    The histology sample preparation system market is segmented into instruments and consumables. Instruments include a range of equipment such as tissue processors, slide strainers, and embedding centers, which are essential for preparing tissue samples for microscopic examination. These instruments are becoming increasingly sophisticated with the integration of automation and digital imaging technologies. Automated tissue processors, for example, streamline the preparation process, reducing manual labor and human error while ensuring consistent and high-quality sample preparation. This segment is expected to witness significant growth as laboratories and diagnostic centers invest in advanced instrumentation to improve diagnostic accuracy and efficiency.



    Consumables, on the other hand, encompass reagents, antibodies, kits, and other disposable items used in the histology sample preparation process. The consumables segment is char

  20. o

    Breast Cancer Histology Images

    • omicsdi.org
    • ega-archive.org
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    Breast Cancer Histology Images [Dataset]. https://www.omicsdi.org/dataset/ega/EGAD00010001911
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    Variables measured
    Genomics
    Description

    Fresh frozen breast cancer H&E tissue images collected and annotated by the International Cancer Genome Consortium (ICGC), that included the BASIS collaboration. Associated with whole genome sequence data as originally described by Nik-Zainal et al, Nature, 2016 (DOI: 10.1038/nature17676) and deposited with ID EGAS00001001178

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None (2019). Invasive Ductal Carcinoma (IDC) Histology Image Dataset [Dataset]. https://academictorrents.com/details/e40bd59ab08861329ce3c418be191651f35e2ffa

Invasive Ductal Carcinoma (IDC) Histology Image Dataset

Explore at:
3 scholarly articles cite this dataset (View in Google Scholar)
bittorrentAvailable download formats
Dataset updated
Feb 24, 2019
Authors
None
License

https://academictorrents.com/nolicensespecifiedhttps://academictorrents.com/nolicensespecified

Description

Invasive Ductal Carcinoma (IDC) is the most common subtype of all breast cancers. To assign an aggressiveness grade to a whole mount sample, pathologists typically focus on the regions which contain the IDC. As a result, one of the common pre-processing steps for automatic aggressiveness grading is to delineate the exact regions of IDC inside of a whole mount slide. Dataset Description The original dataset consisted of 162 whole mount slide images of Breast Cancer (BCa) specimens scanned at 40x. From that, 277,524 patches of size 50 x 50 were extracted (198,738 IDC negative and 78,786 IDC positive). Each patch’s file name is of the format: u_xX_yY_classC.png — > example 10253_idx5_x1351_y1101_class0.png Where u is the patient ID (10253_idx5), X is the x-coordinate of where this patch was cropped from, Y is the y-coordinate of where this patch was cropped from, and C indicates the class where 0 is non-IDC and 1 is IDC.

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