4 datasets found
  1. US Means of Transportation to Work Census Data

    • kaggle.com
    Updated Feb 23, 2022
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    Sagar G (2022). US Means of Transportation to Work Census Data [Dataset]. https://www.kaggle.com/goswamisagard/american-census-survey-b08301-cleaned-csv-data/discussion
    Explore at:
    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Feb 23, 2022
    Dataset provided by
    Kagglehttp://kaggle.com/
    Authors
    Sagar G
    Area covered
    United States
    Description

    US Census Bureau conducts American Census Survey 1 and 5 Yr surveys that record various demographics and provide public access through APIs. I have attempted to call the APIs through the python environment using the requests library, Clean, and organize the data in a usable format.

    Data Ingestion and Cleaning:

    ACS Subject data [2011-2019] was accessed using Python by following the below API Link: https://api.census.gov/data/2011/acs/acs1?get=group(B08301)&for=county:* The data was obtained in JSON format by calling the above API, then imported as Python Pandas Dataframe. The 84 variables returned have 21 Estimate values for various metrics, 21 pairs of respective Margin of Error, and respective Annotation values for Estimate and Margin of Error Values. This data was then undergone through various cleaning processes using Python, where excess variables were removed, and the column names were renamed. Web-Scraping was carried out to extract the variables' names and replace the codes in the column names in raw data.

    The above step was carried out for multiple ACS/ACS-1 datasets spanning 2011-2019 and then merged into a single Python Pandas Dataframe. The columns were rearranged, and the "NAME" column was split into two columns, namely 'StateName' and 'CountyName.' The counties for which no data was available were also removed from the Dataframe. Once the Dataframe was ready, it was separated into two new dataframes for separating State and County Data and exported into '.csv' format

    Data Source:

    More information about the source of Data can be found at the URL below: US Census Bureau. (n.d.). About: Census Bureau API. Retrieved from Census.gov https://www.census.gov/data/developers/about.html

    Final Word:

    I hope this data helps you to create something beautiful, and awesome. I will be posting a lot more databases shortly, if I get more time from assignments, submissions, and Semester Projects 🧙🏼‍♂️. Good Luck.

  2. Data from: KiMoPack: A python Package for Kinetic Modeling of the Chemical...

    • acs.figshare.com
    zip
    Updated Jun 4, 2023
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    Carolin Müller; Torbjörn Pascher; Axl Eriksson; Pavel Chabera; Jens Uhlig (2023). KiMoPack: A python Package for Kinetic Modeling of the Chemical Mechanism [Dataset]. http://doi.org/10.1021/acs.jpca.2c00907.s002
    Explore at:
    zipAvailable download formats
    Dataset updated
    Jun 4, 2023
    Dataset provided by
    ACS Publications
    Authors
    Carolin Müller; Torbjörn Pascher; Axl Eriksson; Pavel Chabera; Jens Uhlig
    License

    Attribution-NonCommercial 4.0 (CC BY-NC 4.0)https://creativecommons.org/licenses/by-nc/4.0/
    License information was derived automatically

    Description

    Herein, we present KiMoPack, an analysis tool for the kinetic modeling of transient spectroscopic data. KiMoPack enables a state-of-the-art analysis routine including data preprocessing and standard fitting (global analysis), as well as fitting of complex (target) kinetic models, interactive viewing of (fit) results, and multiexperiment analysis via user accessible functions and a graphical user interface (GUI) enhanced interface. To facilitate its use, this paper guides the user through typical operations covering a wide range of analysis tasks, establishes a typical workflow and is bridging the gap between ease of use for less experienced users and introducing the advanced interfaces for experienced users. KiMoPack is open source and provides a comprehensive front-end for preprocessing, fitting and plotting of 2-dimensional data that simplifies the access to a powerful python-based data-processing system and forms the foundation for a well documented, reliable, and reproducible data analysis.

  3. f

    Data from: A Python Package for the Localization of Protein Modifications in...

    • acs.figshare.com
    xlsx
    Updated Jun 8, 2023
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    Anthony S. Barente; Judit Villén (2023). A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data [Dataset]. http://doi.org/10.1021/acs.jproteome.2c00194.s002
    Explore at:
    xlsxAvailable download formats
    Dataset updated
    Jun 8, 2023
    Dataset provided by
    ACS Publications
    Authors
    Anthony S. Barente; Judit Villén
    License

    Attribution-NonCommercial 4.0 (CC BY-NC 4.0)https://creativecommons.org/licenses/by-nc/4.0/
    License information was derived automatically

    Description

    Determining the correct localization of post-translational modifications (PTMs) on peptides aids in interpreting their effect on protein function. While most algorithms for this task are available as standalone applications or incorporated into software suites, improving their versatility through access from popular scripting languages facilitates experimentation and incorporation into novel workflows. Here we describe pyAscore, an efficient and versatile implementation of the Ascore algorithm in Python for scoring the localization of user defined PTMs in data dependent mass spectrometry. pyAscore can be used from the command line or imported into Python scripts and accepts standard file formats from popular software tools used in bottom-up proteomics. Access to internal objects for scoring and working with modified peptides adds to the toolbox for working with PTMs in Python. pyAscore is available as an open source package for Python 3.6+ on all major operating systems and can be found at pyascore.readthedocs.io.

  4. f

    Data from: NLoed: A Python Package for Nonlinear Optimal Experimental Design...

    • acs.figshare.com
    zip
    Updated Dec 6, 2023
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    Nathan Braniff; Taylor Pearce; Zixuan Lu; Michael Astwood; William S. R. Forrest; Cody Receno; Brian Ingalls (2023). NLoed: A Python Package for Nonlinear Optimal Experimental Design in Systems Biology [Dataset]. http://doi.org/10.1021/acssynbio.2c00131.s001
    Explore at:
    zipAvailable download formats
    Dataset updated
    Dec 6, 2023
    Dataset provided by
    ACS Publications
    Authors
    Nathan Braniff; Taylor Pearce; Zixuan Lu; Michael Astwood; William S. R. Forrest; Cody Receno; Brian Ingalls
    License

    Attribution-NonCommercial 4.0 (CC BY-NC 4.0)https://creativecommons.org/licenses/by-nc/4.0/
    License information was derived automatically

    Description

    Modeling in systems and synthetic biology relies on accurate parameter estimates and predictions. Accurate model calibration relies, in turn, on data and on how well suited the available data are to a particular modeling task. Optimal experimental design (OED) techniques can be used to identify experiments and data collection procedures that will most efficiently contribute to a given modeling objective. However, implementation of OED is limited by currently available software tools that are not well suited for the diversity of nonlinear models and non-normal data commonly encountered in biological research. Moreover, existing OED tools do not make use of the state-of-the-art numerical tools, resulting in inefficient computation. Here, we present the NLoed software package and demonstrate its use with in vivo data from an optogenetic system in Escherichia coli. NLoed is an open-source Python library providing convenient access to OED methods, with particular emphasis on experimental design for systems biology research. NLoed supports a wide variety of nonlinear, multi-input/output, and dynamic models and facilitates modeling and design of experiments over a wide variety of data types. To support OED investigations, the NLoed package implements maximum likelihood fitting and diagnostic tools, providing a comprehensive modeling workflow. NLoed offers an accessible, modular, and flexible OED tool set suited to the wide variety of experimental scenarios encountered in systems biology research. We demonstrate NLoed’s capabilities by applying it to experimental design for characterization of a bacterial optogenetic system.

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Click to copy link
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Close
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Sagar G (2022). US Means of Transportation to Work Census Data [Dataset]. https://www.kaggle.com/goswamisagard/american-census-survey-b08301-cleaned-csv-data/discussion
Organization logo

US Means of Transportation to Work Census Data

American Census Survey B08301 Cleaned CSV Data

Explore at:
CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
Dataset updated
Feb 23, 2022
Dataset provided by
Kagglehttp://kaggle.com/
Authors
Sagar G
Area covered
United States
Description

US Census Bureau conducts American Census Survey 1 and 5 Yr surveys that record various demographics and provide public access through APIs. I have attempted to call the APIs through the python environment using the requests library, Clean, and organize the data in a usable format.

Data Ingestion and Cleaning:

ACS Subject data [2011-2019] was accessed using Python by following the below API Link: https://api.census.gov/data/2011/acs/acs1?get=group(B08301)&for=county:* The data was obtained in JSON format by calling the above API, then imported as Python Pandas Dataframe. The 84 variables returned have 21 Estimate values for various metrics, 21 pairs of respective Margin of Error, and respective Annotation values for Estimate and Margin of Error Values. This data was then undergone through various cleaning processes using Python, where excess variables were removed, and the column names were renamed. Web-Scraping was carried out to extract the variables' names and replace the codes in the column names in raw data.

The above step was carried out for multiple ACS/ACS-1 datasets spanning 2011-2019 and then merged into a single Python Pandas Dataframe. The columns were rearranged, and the "NAME" column was split into two columns, namely 'StateName' and 'CountyName.' The counties for which no data was available were also removed from the Dataframe. Once the Dataframe was ready, it was separated into two new dataframes for separating State and County Data and exported into '.csv' format

Data Source:

More information about the source of Data can be found at the URL below: US Census Bureau. (n.d.). About: Census Bureau API. Retrieved from Census.gov https://www.census.gov/data/developers/about.html

Final Word:

I hope this data helps you to create something beautiful, and awesome. I will be posting a lot more databases shortly, if I get more time from assignments, submissions, and Semester Projects 🧙🏼‍♂️. Good Luck.

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