Each R script replicates all of the example code from one chapter from the book. All required data for each script are also uploaded, as are all data used in the practice problems at the end of each chapter. The data are drawn from a wide array of sources, so please cite the original work if you ever use any of these data sets for research purposes.

This article discusses how to make statistical graphics a more prominent element of the undergraduate statistics curricula. The focus is on several different types of assignments that exemplify how to incorporate graphics into a course in a pedagogically meaningful way. These assignments include having students deconstruct and reconstruct plots, copy masterful graphs, create one-minute visual revelations, convert tables into “pictures,” and develop interactive visualizations, for example, with the virtual earth as a plotting canvas. In addition to describing the goals and details of each assignment, we also discuss the broader topic of graphics and key concepts that we think warrant inclusion in the statistics curricula. We advocate that more attention needs to be paid to this fundamental field of statistics at all levels, from introductory undergraduate through graduate level courses. With the rapid rise of tools to visualize data, for example, Google trends, GapMinder, ManyEyes, and Tableau, and the increased use of graphics in the media, understanding the principles of good statistical graphics, and having the ability to create informative visualizations is an ever more important aspect of statistics education. Supplementary materials containing code and data for the assignments are available online.

Replication Package for A Study on the Pythonic Functional Constructs' Understandability

This package contains several folders and files with code and data used in the study.

examples/
Contains the code snippets used as objects of the study, named as reported in Table 1, summarizing the experiment design.

RQ1-RQ2-files-for-statistical-analysis/
Contains three .csv files used as input for conducting the statistical analysis and drawing the graphs for addressing the first two research questions of the study. Specifically:

- ConstructUsage.csv contains the declared frequency usage of the three functional constructs object of the study. This file is used to draw Figure 4.
- RQ1.csv contains the collected data used for the mixed-effect logistic regression relating the use of functional constructs with the correctness of the change task, and the logistic regression relating the use of map/reduce/filter functions with the correctness of the change task.
- RQ1Paired-RQ2.csv contains the collected data used for the ordinal logistic regression of the relationship between the perceived ease of understanding of the functional constructs and (i) participants' usage frequency, and (ii) constructs' complexity (except for map/reduce/filter).

inter-rater-RQ3-files/
Contains four .csv files used as input for computing the inter-rater agreement for the manual labeling used for addressing RQ3. Specifically, you will find one file for each functional construct, i.e., comprehension.csv, lambda.csv, and mrf.csv, and a different file used for highlighting the reasons why participants prefer to use the procedural paradigm, i.e., procedural.csv.

Questionnaire-Example.pdf
This file contains the questionnaire submitted to one of the ten experimental groups within our controlled experiment. Other questionnaires are similar, except for the code snippets used for the first section, i.e., change tasks, and the second section, i.e., comparison tasks.

RQ2ManualValidation.csv
This file contains the results of the manual validation being done to sanitize the answers provided by our participants used for addressing RQ2. Specifically, we coded the behavior description using four different levels: (i) correct, (ii) somewhat correct, (iii) wrong, and (iv) automatically generated.

RQ3ManualValidation.xlsx
This file contains the results of the open coding applied to address our third research question. Specifically, you will find four sheets, one for each functional construct and one for the procedural paradigm. For each sheet, you will find the provided answers together with the categories assigned to them.

Appendix.pdf
This file contains the results of the logistic regression relating the use of map, filter, and reduce functions with the correctness of the change task, not shown in the paper.

FuncConstructs-Statistics.r
This file contains an R script that you can reuse to re-run all the analyses conducted and discussed in the paper.

FuncConstructs-Statistics.ipynb
This file contains the code to re-execute all the analysis conducted in the paper as a notebook.

The complete dataset used in the analysis comprises 36 samples, each described by 11 numeric features and 1 target. The attributes considered were caspase 3/7 activity, Mitotracker red CMXRos area and intensity (3 h and 24 h incubations with both compounds), Mitosox oxidation (3 h incubation with the referred compounds) and oxidation rate, DCFDA fluorescence (3 h and 24 h incubations with either compound) and oxidation rate, and DQ BSA hydrolysis. The target of each instance corresponds to one of the 9 possible classes (4 samples per class): Control, 6.25, 12.5, 25 and 50 µM for 6-OHDA and 0.03, 0.06, 0.125 and 0.25 µM for rotenone. The dataset is balanced, it does not contain any missing values and data was standardized across features. The small number of samples prevented a full and strong statistical analysis of the results. Nevertheless, it allowed the identification of relevant hidden patterns and trends.

Exploratory data analysis, information gain, hierarchical clustering, and supervised predictive modeling were performed using Orange Data Mining version 3.25.1 [41]. Hierarchical clustering was performed using the Euclidean distance metric and weighted linkage. Cluster maps were plotted to relate the features with higher mutual information (in rows) with instances (in columns), with the color of each cell representing the normalized level of a particular feature in a specific instance. The information is grouped both in rows and in columns by a two-way hierarchical clustering method using the Euclidean distances and average linkage. Stratified cross-validation was used to train the supervised decision tree. A set of preliminary empirical experiments were performed to choose the best parameters for each algorithm, and we verified that, within moderate variations, there were no significant changes in the outcome. The following settings were adopted for the decision tree algorithm: minimum number of samples in leaves: 2; minimum number of samples required to split an internal node: 5; stop splitting when majority reaches: 95%; criterion: gain ratio. The performance of the supervised model was assessed using accuracy, precision, recall, F-measure and area under the ROC curve (AUC) metrics.

analyze the health and retirement study (hrs) with r the hrs is the one and only longitudinal survey of american seniors. with a panel starting its third decade, the current pool of respondents includes older folks who have been interviewed every two years as far back as 1992. unlike cross-sectional or shorter panel surveys, respondents keep responding until, well, death d o us part. paid for by the national institute on aging and administered by the university of michigan's institute for social research, if you apply for an interviewer job with them, i hope you like werther's original. figuring out how to analyze this data set might trigger your fight-or-flight synapses if you just start clicking arou nd on michigan's website. instead, read pages numbered 10-17 (pdf pages 12-19) of this introduction pdf and don't touch the data until you understand figure a-3 on that last page. if you start enjoying yourself, here's the whole book. after that, it's time to register for access to the (free) data. keep your username and password handy, you'll need it for the top of the download automation r script. next, look at this data flowchart to get an idea of why the data download page is such a righteous jungle. but wait, good news: umich recently farmed out its data management to the rand corporation, who promptly constructed a giant consolidated file with one record per respondent across the whole panel. oh so beautiful. the rand hrs files make much of the older data and syntax examples obsolete, so when you come across stuff like instructions on how to merge years, you can happily ignore them - rand has done it for you. the health and retirement study only includes noninstitutionalized adults when new respondents get added to the panel (as they were in 1992, 1993, 1998, 2004, and 2010) but once they're in, they're in - respondents have a weight of zero for interview waves when they were nursing home residents; but they're still responding and will continue to contribute to your statistics so long as you're generalizing about a population from a previous wave (for example: it's possible to compute "among all americans who were 50+ years old in 1998, x% lived in nursing homes by 2010"). my source for that 411? page 13 of the design doc. wicked. this new github repository contains five scripts: 1992 - 2010 download HRS microdata.R loop through every year and every file, download, then unzip everything in one big party impor t longitudinal RAND contributed files.R create a SQLite database (.db) on the local disk load the rand, rand-cams, and both rand-family files into the database (.db) in chunks (to prevent overloading ram) longitudinal RAND - analysis examples.R connect to the sql database created by the 'import longitudinal RAND contributed files' program create tw o database-backed complex sample survey object, using a taylor-series linearization design perform a mountain of analysis examples with wave weights from two different points in the panel import example HRS file.R load a fixed-width file using only the sas importation script directly into ram with < a href="http://blog.revolutionanalytics.com/2012/07/importing-public-data-with-sas-instructions-into-r.html">SAScii parse through the IF block at the bottom of the sas importation script, blank out a number of variables save the file as an R data file (.rda) for fast loading later replicate 2002 regression.R connect to the sql database created by the 'import longitudinal RAND contributed files' program create a database-backed complex sample survey object, using a taylor-series linearization design exactly match the final regression shown in this document provided by analysts at RAND as an update of the regression on pdf page B76 of this document . click here to view these five scripts for more detail about the health and retirement study (hrs), visit: michigan's hrs homepage rand's hrs homepage the hrs wikipedia page a running list of publications using hrs notes: exemplary work making it this far. as a reward, here's the detailed codebook for the main rand hrs file. note that rand also creates 'flat files' for every survey wave, but really, most every analysis you c an think of is possible using just the four files imported with the rand importation script above. if you must work with the non-rand files, there's an example of how to import a single hrs (umich-created) file, but if you wish to import more than one, you'll have to write some for loops yourself. confidential to sas, spss, stata, and sudaan users: a tidal wave is coming. you can get water up your nose and be dragged out to sea, or you can grab a surf board. time to transition to r. :D

Datasets and metadata used for the full streamline analysis of plant data under different conditions of infection. The tutorial is an example of analysis which can be useful in multiple scenario where comparisons are needed (healthy and sick patients, for example). You can find the tutorial at our website https://hds-sandbox.github.io/AdvancedSingleCell

Usage notes:

all files are ready to use, except for control1.tar.gz which is a folder that needs to be decompressed

Transparency in data visualization is an essential ingredient for scientific communication. The traditional approach of visualizing continuous quantitative data solely in the form of summary statistics (i.e., measures of central tendency and dispersion) has repeatedly been criticized for not revealing the underlying raw data distribution. Remarkably, however, systematic and easy-to-use solutions for raw data visualization using the most commonly reported statistical software package for data analysis, IBM SPSS Statistics, are missing. Here, a comprehensive collection of more than 100 SPSS syntax files and an SPSS dataset template is presented and made freely available that allow the creation of transparent graphs for one-sample designs, for one- and two-factorial between-subject designs, for selected one- and two-factorial within-subject designs as well as for selected two-factorial mixed designs and, with some creativity, even beyond (e.g., three-factorial mixed-designs). Depending on graph type (e.g., pure dot plot, box plot, and line plot), raw data can be displayed along with standard measures of central tendency (arithmetic mean and median) and dispersion (95% CI and SD). The free-to-use syntax can also be modified to match with individual needs. A variety of example applications of syntax are illustrated in a tutorial-like fashion along with fictitious datasets accompanying this contribution. The syntax collection is hoped to provide researchers, students, teachers, and others working with SPSS a valuable tool to move towards more transparency in data visualization.

This manual provides guidance on how to create a pair analysis file and on the appropriate weights and design variables needed to analyze pair data, and it provides example code in multiple software packages.

This artifact accompanies the SEET@ICSE article "Assessing the impact of hints in learning formal specification", which reports on a user study to investigate the impact of different types of automated hints while learning a formal specification language, both in terms of immediate performance and learning retention, but also in the emotional response of the students. This research artifact provides all the material required to replicate this study (except for the proprietary questionnaires passed to assess the emotional response and user experience), as well as the collected data and data analysis scripts used for the discussion in the paper.

Dataset

The artifact contains the resources described below.

Experiment resources

The resources needed for replicating the experiment, namely in directory experiment:

alloy_sheet_pt.pdf: the 1-page Alloy sheet that participants had access to during the 2 sessions of the experiment. The sheet was passed in Portuguese due to the population of the experiment.

alloy_sheet_en.pdf: a version the 1-page Alloy sheet that participants had access to during the 2 sessions of the experiment translated into English.

docker-compose.yml: a Docker Compose configuration file to launch Alloy4Fun populated with the tasks in directory data/experiment for the 2 sessions of the experiment.

api and meteor: directories with source files for building and launching the Alloy4Fun platform for the study.

Experiment data

The task database used in our application of the experiment, namely in directory data/experiment:

Model.json, Instance.json, and Link.json: JSON files with to populate Alloy4Fun with the tasks for the 2 sessions of the experiment.

identifiers.txt: the list of all (104) available participant identifiers that can participate in the experiment.

Collected data

Data collected in the application of the experiment as a simple one-factor randomised experiment in 2 sessions involving 85 undergraduate students majoring in CSE. The experiment was validated by the Ethics Committee for Research in Social and Human Sciences of the Ethics Council of the University of Minho, where the experiment took place. Data is shared the shape of JSON and CSV files with a header row, namely in directory data/results:

data_sessions.json: data collected from task-solving in the 2 sessions of the experiment, used to calculate variables productivity (PROD1 and PROD2, between 0 and 12 solved tasks) and efficiency (EFF1 and EFF2, between 0 and 1).

data_socio.csv: data collected from socio-demographic questionnaire in the 1st session of the experiment, namely:

participant identification: participant's unique identifier (ID);

socio-demographic information: participant's age (AGE), sex (SEX, 1 through 4 for female, male, prefer not to disclosure, and other, respectively), and average academic grade (GRADE, from 0 to 20, NA denotes preference to not disclosure).

data_emo.csv: detailed data collected from the emotional questionnaire in the 2 sessions of the experiment, namely:

participant identification: participant's unique identifier (ID) and the assigned treatment (column HINT, either N, L, E or D);

detailed emotional response data: the differential in the 5-point Likert scale for each of the 14 measured emotions in the 2 sessions, ranging from -5 to -1 if decreased, 0 if maintained, from 1 to 5 if increased, or NA denoting failure to submit the questionnaire. Half of the emotions are positive (Admiration1 and Admiration2, Desire1 and Desire2, Hope1 and Hope2, Fascination1 and Fascination2, Joy1 and Joy2, Satisfaction1 and Satisfaction2, and Pride1 and Pride2), and half are negative (Anger1 and Anger2, Boredom1 and Boredom2, Contempt1 and Contempt2, Disgust1 and Disgust2, Fear1 and Fear2, Sadness1 and Sadness2, and Shame1 and Shame2). This detailed data was used to compute the aggregate data in data_emo_aggregate.csv and in the detailed discussion in Section 6 of the paper.

data_umux.csv: data collected from the user experience questionnaires in the 2 sessions of the experiment, namely:

participant identification: participant's unique identifier (ID);

user experience data: summarised user experience data from the UMUX surveys (UMUX1 and UMUX2, as a usability metric ranging from 0 to 100).

participants.txt: the list of participant identifiers that have registered for the experiment.

Analysis scripts

The analysis scripts required to replicate the analysis of the results of the experiment as reported in the paper, namely in directory analysis:

analysis.r: An R script to analyse the data in the provided CSV files; each performed analysis is documented within the file itself.

requirements.r: An R script to install the required libraries for the analysis script.

normalize_task.r: A Python script to normalize the task JSON data from file data_sessions.json into the CSV format required by the analysis script.

normalize_emo.r: A Python script to compute the aggregate emotional response in the CSV format required by the analysis script from the detailed emotional response data in the CSV format of data_emo.csv.

Dockerfile: Docker script to automate the analysis script from the collected data.

Setup

To replicate the experiment and the analysis of the results, only Docker is required.

If you wish to manually replicate the experiment and collect your own data, you'll need to install:

A modified version of the Alloy4Fun platform, which is built in the Meteor web framework. This version of Alloy4Fun is publicly available in branch study of its repository at https://github.com/haslab/Alloy4Fun/tree/study.

If you wish to manually replicate the analysis of the data collected in our experiment, you'll need to install:

Python to manipulate the JSON data collected in the experiment. Python is freely available for download at https://www.python.org/downloads/, with distributions for most platforms.

R software for the analysis scripts. R is freely available for download at https://cran.r-project.org/mirrors.html, with binary distributions available for Windows, Linux and Mac.

Usage

Experiment replication

This section describes how to replicate our user study experiment, and collect data about how different hints impact the performance of participants.

To launch the Alloy4Fun platform populated with tasks for each session, just run the following commands from the root directory of the artifact. The Meteor server may take a few minutes to launch, wait for the "Started your app" message to show.

cd experimentdocker-compose up

This will launch Alloy4Fun at http://localhost:3000. The tasks are accessed through permalinks assigned to each participant. The experiment allows for up to 104 participants, and the list of available identifiers is given in file identifiers.txt. The group of each participant is determined by the last character of the identifier, either N, L, E or D. The task database can be consulted in directory data/experiment, in Alloy4Fun JSON files.

In the 1st session, each participant was given one permalink that gives access to 12 sequential tasks. The permalink is simply the participant's identifier, so participant 0CAN would just access http://localhost:3000/0CAN. The next task is available after a correct submission to the current task or when a time-out occurs (5mins). Each participant was assigned to a different treatment group, so depending on the permalink different kinds of hints are provided. Below are 4 permalinks, each for each hint group:

Group N (no hints): http://localhost:3000/0CAN

Group L (error locations): http://localhost:3000/CA0L

Group E (counter-example): http://localhost:3000/350E

Group D (error description): http://localhost:3000/27AD

In the 2nd session, likewise the 1st session, each permalink gave access to 12 sequential tasks, and the next task is available after a correct submission or a time-out (5mins). The permalink is constructed by prepending the participant's identifier with P-. So participant 0CAN would just access http://localhost:3000/P-0CAN. In the 2nd sessions all participants were expected to solve the tasks without any hints provided, so the permalinks from different groups are undifferentiated.

Before the 1st session the participants should answer the socio-demographic questionnaire, that should ask the following information: unique identifier, age, sex, familiarity with the Alloy language, and average academic grade.

Before and after both sessions the participants should answer the standard PrEmo 2 questionnaire. PrEmo 2 is published under an Attribution-NonCommercial-NoDerivatives 4.0 International Creative Commons licence (CC BY-NC-ND 4.0). This means that you are free to use the tool for non-commercial purposes as long as you give appropriate credit, provide a link to the license, and do not modify the original material. The original material, namely the depictions of the diferent emotions, can be downloaded from https://diopd.org/premo/. The questionnaire should ask for the unique user identifier, and for the attachment with each of the depicted 14 emotions, expressed in a 5-point Likert scale.

After both sessions the participants should also answer the standard UMUX questionnaire. This questionnaire can be used freely, and should ask for the user unique identifier and answers for the standard 4 questions in a 7-point Likert scale. For information about the questions, how to implement the questionnaire, and how to compute the usability metric ranging from 0 to 100 score from the answers, please see the original paper:

Kraig Finstad. 2010. The usability metric for user experience. Interacting with computers 22, 5 (2010), 323–327.

Analysis of other applications of the experiment

This section describes how to replicate the analysis of the data collected in an application of the experiment described in Experiment replication.

The analysis script expects data in 4 CSV files,

The data are in long form, with some studies having multiple lines and includes a sample of children ranging from 3.54 to 13.75 years old. The main effect size is the r, correlation coefficient, and the accompanying sample size is also included. Each article is coded to include a study number, the article name, and its authors, as well as a X moderators. The moderators are as follows:
- grade_new2 = sample grade category, where 1 = preschool/kindergarten, 2 = secondary
- HME_comp_new = HME component, where 1 = direct activities, 2 = indirect activities, 3 = combination direct and indirect activities, 4 = parent attitudes and/or beliefs, 5 = parent math expectations, 6 = spatial activities, 7 = math talk
- hme_type_nocombo = HME measurement method, where 1 = frequency-based scale, 2 = rating scale, 3 = checklist, 4 = observation
- obs_pr = two-level HME measurement method variable, where 1 = observation-based, 2 = parent-report
- math_dom_nospat = math domain, where 1 = arithmetic operations, 2 = relations, 3 = numbering, 4 = multiple domains
- symbolic_nonsymbolic = refers to math assessment, where 1 = symbolic, 2 = non-symbolic, 3 = combination symbolic and non-symbolic
- timed_new = refers to math assessment, where 1 = timed, 2 = untimed, . = combination timed and untimed
- composite = refers to math assessment, where 1 = composite, 2 = single math assessment
- std_new = refers to math assessment, where 1 = standardized, 2 = unstandardized, . = combination standardized and unstandardized
- hme_calc = hme calculation method, where 1 = latent factor score, 2 = sum score, 3 = single item
- age = sample age in years
- long_new = refers to effect size, where 1 = longitudinal relation, 2 = concurrent relation
- low_SES = sample SES, where 1 = low SES (50% or more), 2 = average SES, 3 = high SES (50% or more)
- parent_ed = sample SES in terms of parent education level, based on the percentage of parents reported to have completed any post-secondary education (included a vocational certification, attended some college, and/or completed an associate’s, bachelor’s, or graduate degree program). The percentage was converted into a decimal value ranging from .00 to 1.00.

We compiled macroinvertebrate assemblage data collected from 1995 to 2014 from the St. Louis River Area of Concern (AOC) of western Lake Superior. Our objective was to define depth-adjusted cutoff values for benthos condition classes (poor, fair, reference) to provide tool useful for assessing progress toward achieving removal targets for the degraded benthos beneficial use impairment in the AOC. The relationship between depth and benthos metrics was wedge-shaped. We therefore used quantile regression to model the limiting effect of depth on selected benthos metrics, including taxa richness, percent non-oligochaete individuals, combined percent Ephemeroptera, Trichoptera, and Odonata individuals, and density of ephemerid mayfly nymphs (Hexagenia). We created a scaled trimetric index from the first three metrics. Metric values at or above the 90th percentile quantile regression model prediction were defined as reference condition for that depth. We set the cutoff between poor and fair condition as the 50th percentile model prediction. We examined sampler type, exposure, geographic zone of the AOC, and substrate type for confounding effects. Based on these analyses we combined data across sampler type and exposure classes and created separate models for each geographic zone. We used the resulting condition class cutoff values to assess the relative benthic condition for three habitat restoration project areas. The depth-limited pattern of ephemerid abundance we observed in the St. Louis River AOC also occurred elsewhere in the Great Lakes. We provide tabulated model predictions for application of our depth-adjusted condition class cutoff values to new sample data. This dataset is associated with the following publication: Angradi, T., W. Bartsch, A. Trebitz, V. Brady, and J. Launspach. A depth-adjusted ambient distribution approach for setting numeric removal targets for a Great Lakes Area of Concern beneficial use impairment: Degraded benthos. JOURNAL OF GREAT LAKES RESEARCH. International Association for Great Lakes Research, Ann Arbor, MI, USA, 43(1): 108-120, (2017).

Objective: The objective of this review is to identify what is known about Indigenous data analysis methods for research. Introduction: Understanding Indigenous data analyses methods for research is crucial in health research with Indigenous participants, to support culturally appropriate interpretation of research data, and culturally inclusive analyses in cross-cultural research teams. Inclusion Criteria: This review will consider primary research studies that report on Indigenous data analysis methods for research. Method: Medline (via Ovid SP), PsycINFO (via Ovid SP), Web of Science (Clarivate Analytics), Scopus (Elsevier), Cumulated Index to Nursing and Allied Health Literature CINAHL (EBSCOhost), ProQuest Central, ProQuest Social Sciences Premium (Clarivate) will be searched. ProQuest (Theses and Dissertations) will be searched for unpublished material. Studies published from inception onwards and written in English will be assessed for inclusion. Studies meeting the inclusion criteria will be assessed for methodological quality and data will be extracted.

Data analysis can be accurate and reliable only if the underlying assumptions of the used statistical method are validated. Any violations of these assumptions can change the outcomes and conclusions of the analysis. In this study, we developed Smart Data Analysis V2 (SDA-V2), an interactive and user-friendly web application, to assist users with limited statistical knowledge in data analysis, and it can be freely accessed at https://jularatchumnaul.shinyapps.io/SDA-V2/. SDA-V2 automatically explores and visualizes data, examines the underlying assumptions associated with the parametric test, and selects an appropriate statistical method for the given data. Furthermore, SDA-V2 can assess the quality of research instruments and determine the minimum sample size required for a meaningful study. However, while SDA-V2 is a valuable tool for simplifying statistical analysis, it does not replace the need for a fundamental understanding of statistical principles. Researchers are encouraged to combine their expertise with the software’s capabilities to achieve the most accurate and credible results.

Our study focuses on the hardiest microorganisms inhabiting the ISS in order to assess their diversity and capabilities to resist certain stresses. We specifically selected dust samples from the Russian modules that were obtained 8-10 years ago and stored since then under sealed conditions on Earth. Targeting long-time survivors and spore-forming microorganisms we assessed consequently the cultivable microbial community of these samples in order to obtain model microbial strains that could help to analyze specific adaptation towards environmental stresses such as desiccation and lack of nutrients. In this study we analyzed these microorganisms with respect to their resistance towards thermal stress and exposure to clinically relevant antibiotics. In addition we assessed the bacterial and archaeal community via molecular methods (NGS sequencing) and compared our new data with the previously derived information from the ISS microbiome.

Abstract

Background: Adolescent girls in Kenya are disproportionately affected by early and unintended pregnancies, unsafe abortion and HIV infection. The In Their Hands (ITH) programme in Kenya aims to increase adolescents' use of high-quality sexual and reproductive health (SRH) services through targeted interventions. ITH Programme aims to promote use of contraception and testing for sexually transmitted infections (STIs) including HIV or pregnancy, for sexually active adolescent girls, 2) provide information, products and services on the adolescent girl's terms; and 3) promote communities support for girls and boys to access SRH services.

Objectives: The objectives of the evaluation are to assess: a) to what extent and how the new Adolescent Reproductive Health (ARH) partnership model and integrated system of delivery is working to meet its intended objectives and the needs of adolescents; b) adolescent user experiences across key quality dimensions and outcomes; c) how ITH programme has influenced adolescent voice, decision-making autonomy, power dynamics and provider accountability; d) how community support for adolescent reproductive and sexual health initiatives has changed as a result of this programme.

Methodology ITH programme is being implemented in two phases, a formative planning and experimentation in the first year from April 2017 to March 2018, and a national roll out and implementation from April 2018 to March 2020. This second phase is informed by an Annual Programme Review and thorough benchmarking and assessment which informed critical changes to performance and capacity so that ITH is fit for scale. It is expected that ITH will cover approximately 250,000 adolescent girls aged 15-19 in Kenya by April 2020. The programme is implemented by a consortium of Marie Stopes Kenya (MSK), Well Told Story, and Triggerise. ITH's key implementation strategies seek to increase adolescent motivation for service use, create a user-defined ecosystem and platform to provide girls with a network of accessible subsidized and discreet SRH services; and launch and sustain a national discourse campaign around adolescent sexuality and rights. The 3-year study will employ a mixed-methods approach with multiple data sources including secondary data, and qualitative and quantitative primary data with various stakeholders to explore their perceptions and attitudes towards adolescents SRH services. Quantitative data analysis will be done using STATA to provide descriptive statistics and statistical associations / correlations on key variables. All qualitative data will be analyzed using NVIVO software.

Study Duration: 36 months - between 2018 and 2020.

Geographic coverage

Narok and Homabay counties

Analysis unit

Households

Universe

All adolescent girls aged 15-19 years resident in the household.

Sampling procedure

The sampling of adolescents for the household survey was based on expected changes in adolescent's intention to use contraception in future. According to the Kenya Demographic and Health Survey 2014, 23.8% of adolescents and young women reported not intending to use contraception in future. This was used as a baseline proportion for the intervention as it aimed to increase demand and reduce the proportion of sexually active adolescents who did not intend to use contraception in the future. Assuming that the project was to achieve an impact of at least 2.4 percentage points in the intervention counties (i.e. a reduction by 10%), a design effect of 1.5 and a non- response rate of 10%, a sample size of 1885 was estimated using Cochran's sample size formula for categorical data was adequate to detect this difference between baseline and end line time points. Based on data from the 2009 Kenya census, there were approximately 0.46 adolescents girls per a household, which meant that the study was to include approximately 4876 households from the two counties at both baseline and end line surveys.

We collected data among a representative sample of adolescent girls living in both urban and rural ITH areas to understand adolescents' access to information, use of SRH services and SRH-related decision making autonomy before the implementation of the intervention. Depending on the number of ITH health facilities in the two study counties, Homa Bay and Narok that, we sampled 3 sub-Counties in Homa Bay: West Kasipul, Ndhiwa and Kasipul; and 3 sub-Counties in Narok, Narok Town, Narok South and Narok East purposively. In each of the ITH intervention counties, there were sub-counties that had been prioritized for the project and our data collection focused on these sub-counties selected for intervention. A stratified sampling procedure was used to select wards with in the sub-counties and villages from the wards. Then households were selected from each village after all households in the villages were listed. The purposive selection of sub-counties closer to ITH intervention facilities meant that urban and semi-urban areas were oversampled due to the concentration of health facilities in urban areas.

Qualitative Sampling

Focus Group Discussion participants were recruited from the villages where the ITH adolescent household survey was conducted in both counties. A convenience sample of consenting adults living in the villages were invited to participate in the FGDS. The discussion was conducted in local languages. A facilitator and note-taker trained on how to use the focus group guide, how to facilitate the group to elicit the information sought, and how to take detailed notes. All focus group discussions took place in the local language and were tape-recorded, and the consent process included permission to tape-record the session. Participants were identified only by their first names and participants were asked not to share what was discussed outside of the focus group. Participants were read an informed consent form and asked to give written consent. In-depth interviews were conducted with purposively selected sample of consenting adolescent girls who participated in the adolescent survey. We conducted a total of 45 In-depth interviews with adolescent girls (20 in Homa Bay County and 25 in Narok County respectively). In addition, 8 FGDs (4 each per county) were conducted with mothers of adolescent girls who are usual residents of the villages which had been identified for the interviews and another 4 FGDs (2 each per county) with CHVs.

Sampling deviation

N/A

Mode of data collection

Face-to-face [f2f] for quantitative data collection and Focus Group Discussions and In Depth Interviews for qualitative data collection

Research instrument

The questionnaire covered; socio-demographic and household information, SRH knowledge and sources of information, sexual activity and relationships, family planning knowledge, access, choice and use when needed, exposure to family planning messages and voice and decision making autonomy and quality of care for those who visited health facilities in the 12 months before the survey. The questionnaire was piloted before the data collection and the questions reviewed for appropriateness, comprehension and flow. The questionnaire was piloted among a sample of 42 adolescent girls (two each per field interviewer) 15-19 from a community outside the study counties.

The questionnaire was originally developed in English and later translated into Kiswahili. The questionnaire was programmed using ODK-based Survey CTO platform for data collection and management and was administered through face-to-face interview.

Cleaning operations

The survey tools were programmed using the ODK-based SurveyCTO platform for data collection and management. During programming, consistency checks were in-built into the data capture software which ensured that there were no cases of missing or implausible information/values entered into the database by the field interviewers. For example, the application included controls for variables ranges, skip patterns, duplicated individuals, and intra- and inter-module consistency checks. This reduced or eliminated errors usually introduced at the data capture stage. Once programmed, the survey tools were tested by the programming team who in conjunction with the project team conducted further testing on the application's usability, in-built consistency checks (skips, variable ranges, duplicating individuals etc.), and inter-module consistency checks. Any issues raised were documented and tracked on the Issue Tracker and followed up to full and timely resolution. After internal testing was done, the tools were availed to the project and field teams to perform user acceptance testing (UAT) so as to verify and validate that the electronic platform worked exactly as expected, in terms of usability, questions design, checks and skips etc.

Data cleaning was performed to ensure that data were free of errors and that indicators generated from these data were accurate and consistent. This process begun on the first day of data collection as the first records were uploaded into the database. The data manager used data collected during pilot testing to begin writing scripts in Stata 14 to check the variables in the data in 'real-time'. This ensured the resolutions of any inconsistencies that could be addressed by the data collection teams during the fieldwork activities. The Stata 14 scripts that perform real-time checks and clean data also wrote to a .rtf file that detailed every check performed against each variable, any inconsistencies encountered, and all steps that were taken to address these inconsistencies. The .rtf files also reported when a variable was

A collection of various sample data for the VAPOR (Visualization and Analysis Platform for Ocean, Atmosphere, and Solar Researchers) software.

Abstract

In 2001, the World Bank in co-operation with the Republika Srpska Institute of Statistics (RSIS), the Federal Institute of Statistics (FOS) and the Agency for Statistics of BiH (BHAS), carried out a Living Standards Measurement Survey (LSMS). The Living Standard Measurement Survey LSMS, in addition to collecting the information necessary to obtain a comprehensive as possible measure of the basic dimensions of household living standards, has three basic objectives, as follows:

1. To provide the public sector, government, the business community, scientific institutions, international donor organizations and social organizations with information on different indicators of the population's living conditions, as well as on available resources for satisfying basic needs.

2. To provide information for the evaluation of the results of different forms of government policy and programs developed with the aim to improve the population's living standard. The survey will enable the analysis of the relations between and among different aspects of living standards (housing, consumption, education, health, labor) at a given time, as well as within a household.

3. To provide key contributions for development of government's Poverty Reduction Strategy Paper, based on analyzed data.

The Department for International Development, UK (DFID) contributed funding to the LSMS and provided funding for a further two years of data collection for a panel survey, known as the Household Survey Panel Series (HSPS). Birks Sinclair & Associates Ltd. were responsible for the management of the HSPS with technical advice and support provided by the Institute for Social and Economic Research (ISER), University of Essex, UK. The panel survey provides longitudinal data through re-interviewing approximately half the LSMS respondents for two years following the LSMS, in the autumn of 2002 and 2003. The LSMS constitutes Wave 1 of the panel survey so there are three years of panel data available for analysis. For the purposes of this documentation we are using the following convention to describe the different rounds of the panel survey: - Wave 1 LSMS conducted in 2001 forms the baseline survey for the panel
- Wave 2 Second interview of 50% of LSMS respondents in Autumn/ Winter 2002 - Wave 3 Third interview with sub-sample respondents in Autumn/ Winter 2003

The panel data allows the analysis of key transitions and events over this period such as labour market or geographical mobility and observe the consequent outcomes for the well-being of individuals and households in the survey. The panel data provides information on income and labour market dynamics within FBiH and RS. A key policy area is developing strategies for the reduction of poverty within FBiH and RS. The panel will provide information on the extent to which continuous poverty is experienced by different types of households and individuals over the three year period. And most importantly, the co-variates associated with moves into and out of poverty and the relative risks of poverty for different people can be assessed. As such, the panel aims to provide data, which will inform the policy debates within FBiH and RS at a time of social reform and rapid change.

Geographic coverage

National coverage. Domains: Urban/rural/mixed; Federation; Republic

Kind of data

Sample survey data [ssd]

Sampling procedure

The Wave 3 sample consisted of 2878 households who had been interviewed at Wave 2 and a further 73 households who were interviewed at Wave 1 but were non-contact at Wave 2 were issued. A total of 2951 households (1301 in the RS and 1650 in FBiH) were issued for Wave 3. As at Wave 2, the sample could not be replaced with any other households.

Panel design

Eligibility for inclusion

The household and household membership definitions are the same standard definitions as a Wave 2. While the sample membership status and eligibility for interview are as follows: i) All members of households interviewed at Wave 2 have been designated as original sample members (OSMs). OSMs include children within households even if they are too young for interview. ii) Any new members joining a household containing at least one OSM, are eligible for inclusion and are designated as new sample members (NSMs). iii) At each wave, all OSMs and NSMs are eligible for inclusion, apart from those who move outof-scope (see discussion below). iv) All household members aged 15 or over are eligible for interview, including OSMs and NSMs.

Following rules

The panel design means that sample members who move from their previous wave address must be traced and followed to their new address for interview. In some cases the whole household will move together but in others an individual member may move away from their previous wave household and form a new split-off household of their own. All sample members, OSMs and NSMs, are followed at each wave and an interview attempted. This method has the benefit of maintaining the maximum number of respondents within the panel and being relatively straightforward to implement in the field.

Definition of 'out-of-scope'

It is important to maintain movers within the sample to maintain sample sizes and reduce attrition and also for substantive research on patterns of geographical mobility and migration. The rules for determining when a respondent is 'out-of-scope' are as follows:

i. Movers out of the country altogether i.e. outside FBiH and RS. This category of mover is clear. Sample members moving to another country outside FBiH and RS will be out-of-scope for that year of the survey and not eligible for interview.

ii. Movers between entities Respondents moving between entities are followed for interview. The personal details of the respondent are passed between the statistical institutes and a new interviewer assigned in that entity.

iii. Movers into institutions Although institutional addresses were not included in the original LSMS sample, Wave 3 individuals who have subsequently moved into some institutions are followed. The definitions for which institutions are included are found in the Supervisor Instructions.

iv. Movers into the district of Brcko are followed for interview. When coding entity Brcko is treated as the entity from which the household who moved into Brcko originated.

Mode of data collection

Face-to-face [f2f]

Research instrument

Questionnaire design

Approximately 90% of the questionnaire (Annex B) is based on the Wave 2 questionnaire, carrying forward core measures that are needed to measure change over time. The questionnaire was widely circulated and changes were made as a result of comments received.

Pretesting

In order to undertake a longitudinal test the Wave 2 pretest sample was used. The Control Forms and Advance letters were generated from an Access database containing details of ten households in Sarajevo and fourteen in Banja Luka. The pretest was undertaken from March 24-April 4 and resulted in 24 households (51 individuals) successfully interviewed. One mover household was successfully traced and interviewed.
In order to test the questionnaire under the hardest circumstances a briefing was not held. A list of the main questionnaire changes was given to experienced interviewers.

Issues arising from the pretest

Interviewers were asked to complete a Debriefing and Rating form. The debriefing form captured opinions on the following three issues:

1. General reaction to being re-interviewed. In some cases there was a wariness of being asked to participate again, some individuals asking “Why Me?” Interviewers did a good job of persuading people to take part, only one household refused and another asked to be removed from the sample next year. Having the same interviewer return to the same households was considered an advantage. Most respondents asked what was the benefit to them of taking part in the survey. This aspect was reemphasised in the Advance Letter, Respondent Report and training of the Wave 3 interviewers.

2. Length of the questionnaire. The average time of interview was 30 minutes. No problems were mentioned in relation to the timing, though interviewers noted that some respondents, particularly the elderly, tended to wonder off the point and that control was needed to bring them back to the questions in the questionnaire. One interviewer noted that the economic situation of many respondents seems to have got worse from the previous year and it was necessary to listen to respondents “stories” during the interview.

3. Confidentiality. No problems were mentioned in relation to confidentiality. Though interviewers mentioned it might be worth mentioning the new Statistics Law in the Advance letter. The Rating Form asked for details of specific questions that were unclear. These are described below with a description of the changes made.

• Module 3. Q29-31 have been added to capture funds received for education, scholarships etc.

• Module 4. Pretest respondents complained that the 6 questions on "Has your health limited you..." and the 16 on "in the last 7 days have you felt depressed” etc were too many. These were reduced by half (Q38-Q48). The LSMS data was examined and those questions where variability between the answers was widest were chosen.

• Module 5. The new employment questions (Q42-Q44) worked well and have been kept in the main questionnaire.

• Module 7. There were no problems reported with adding the credit questions (Q28-Q36)

• Module 9. SIG recommended that some of Questions 1-12 were relevant only to those aged over 18 so additional skips have been added. Some respondents complained the questionnaire was boring. To try and overcome

Envestnet®| Yodlee®'s Electronic Payment Data (Aggregate/Row) Panels consist of de-identified, near-real time (T+1) USA credit/debit/ACH transaction level data – offering a wide view of the consumer activity ecosystem. The underlying data is sourced from end users leveraging the aggregation portion of the Envestnet®| Yodlee®'s financial technology platform.

Envestnet | Yodlee Consumer Panels (Aggregate/Row) include data relating to millions of transactions, including ticket size and merchant location. The dataset includes de-identified credit/debit card and bank transactions (such as a payroll deposit, account transfer, or mortgage payment). Our coverage offers insights into areas such as consumer, TMT, energy, REITs, internet, utilities, ecommerce, MBS, CMBS, equities, credit, commodities, FX, and corporate activity. We apply rigorous data science practices to deliver key KPIs daily that are focused, relevant, and ready to put into production.

We offer free trials. Our team is available to provide support for loading, validation, sample scripts, or other services you may need to generate insights from our data.

Investors, corporate researchers, and corporates can use our data to answer some key business questions such as: - How much are consumers spending with specific merchants/brands and how is that changing over time? - Is the share of consumer spend at a specific merchant increasing or decreasing? - How are consumers reacting to new products or services launched by merchants? - For loyal customers, how is the share of spend changing over time? - What is the company’s market share in a region for similar customers? - Is the company’s loyal user base increasing or decreasing? - Is the lifetime customer value increasing or decreasing?

Additional Use Cases: - Use spending data to analyze sales/revenue broadly (sector-wide) or granular (company-specific). Historically, our tracked consumer spend has correlated above 85% with company-reported data from thousands of firms. Users can sort and filter by many metrics and KPIs, such as sales and transaction growth rates and online or offline transactions, as well as view customer behavior within a geographic market at a state or city level. - Reveal cohort consumer behavior to decipher long-term behavioral consumer spending shifts. Measure market share, wallet share, loyalty, consumer lifetime value, retention, demographics, and more.) - Study the effects of inflation rates via such metrics as increased total spend, ticket size, and number of transactions. - Seek out alpha-generating signals or manage your business strategically with essential, aggregated transaction and spending data analytics.

Use Cases Categories (Our data provides an innumerable amount of use cases, and we look forward to working with new ones): 1. Market Research: Company Analysis, Company Valuation, Competitive Intelligence, Competitor Analysis, Competitor Analytics, Competitor Insights, Customer Data Enrichment, Customer Data Insights, Customer Data Intelligence, Demand Forecasting, Ecommerce Intelligence, Employee Pay Strategy, Employment Analytics, Job Income Analysis, Job Market Pricing, Marketing, Marketing Data Enrichment, Marketing Intelligence, Marketing Strategy, Payment History Analytics, Price Analysis, Pricing Analytics, Retail, Retail Analytics, Retail Intelligence, Retail POS Data Analysis, and Salary Benchmarking

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In biomedicine as well as in many other areas experimental data consists of topographically ordered multidimensional data arrays or images.

In our collaboration, multi parameter flourescence microscopy data of immunoflourescently labeled lymphocytes has to be analysed. One experimental data set consists of n intensity images of the sample. As a result of a specific immunolabeling technique in each image different subsets of the lymphocytes appear with high intensity values, expressing the existence of a specific cell surface protein. Because the positions of the cells are not affected by the labeling process, the n flourescence signals of a cell can be traced through the image stack at constant coordinates.

The analysis of such stacks of images by an expert user is limited to two strategies in most laboratories: the images are analyzed one after the other or up to three images are written into the RGB channels of a color map. Obviously, these techniques are not suitable for the analysis of higher dimensional data.

Here, Sonification of the stack of images allows to perceive the complete pattern of all markers. The biomedical expert may probe specific cells on an auditory map and listen to their flourescence patterns. The sonification was designed to satisfy specific requirements:

• Identification - Cells with identical patterns should very easily be perceived as identical sounds
• Similarity - Similar cell flourescence patterns should lead to sonifications that sound similar
• Extensibility - the sonification should be extensible, so that the future addition of markers does not change the sound characteristic, driven by the other markers
• Short Duration - the whole sonification should last only a short time of about 1 sec, to allow a fast browsing of the image.

Such sonifications can be derived using several strategies. One is to play a tone for each marker if the corresponding flourescence intensity is more than a threshold. Thus a rythmic pattern emerges for each cell. Another strategy is to use frequency to distinct markers. Thus each cell is a superposition of tones with different pitch and a chord or tone-cluster is the result. This leads to a harmonic presentation of each cell. However, using both time and pitch, the result is a rythmical sequence of tones and thus a specific melody for a cell. As our abbilities to memorize and recognice melodies or musical structures is better than recognizing visual presented histograms, this yields a promising approach for the inspection of such data by an expert. Now, an example sonification is presented using only five dimensional data images. However, the results are even good with much higher dimensionality - we tested the method with a stack of 12 images. The following demonstration uses only 5 markers. A map is rendered to show all cells for browsing (shown right)

https://pub.uni-bielefeld.de/download/2763993/2763999" height=100 width=120 align=TEXTTOP> cd-02	https://pub.uni-bielefeld.de/download/2763993/2764001" height=100 width=120> cd-08		Identical patterns: Cell 1 Cell 2
https://pub.uni-bielefeld.de/download/2763993/2763998" height=100 width=120> cd-03	------	https://pub.uni-bielefeld.de/download/2763993/2764003" height=100 width=120 align=TEXTTOP> superposition	Similar pattern: Cell 3
https://pub.uni-bielefeld.de/download/2763993/2764000" height=100 width=120 align=TEXTTOP> cd-04	https://pub.uni-bielefeld.de/download/2763993/2764002" height=100 width=120 align=TEXTTOP> hla-dr		Very different pattern: Cell 4

A specific advantage of this method is, that it allows to examine the high-dimensional data vectors without the need to change the viewing direction. However, there are many other methods to present such data acoustically, e.g. by using different timbre classes for the markers, like percussive instruments, fluid sounds, musical instruments or the human voice. These alternatives and their applicability are currently investigated.

The MSL SAM Level 1B data set is generated by applying corrections to Level 1A data, e.g. detector dead time, TCD temperature, noise removal, corrections for saturation and instrument response function.