77 datasets found
  1. C

    COVID-19 Cases, Tests, and Deaths by ZIP Code - Historical

    • data.cityofchicago.org
    • healthdata.gov
    • +3more
    Updated May 23, 2024
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    City of Chicago (2024). COVID-19 Cases, Tests, and Deaths by ZIP Code - Historical [Dataset]. https://data.cityofchicago.org/Health-Human-Services/COVID-19-Cases-Tests-and-Deaths-by-ZIP-Code-Histor/yhhz-zm2v
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    kml, xml, csv, kmz, xlsx, application/geo+jsonAvailable download formats
    Dataset updated
    May 23, 2024
    Dataset authored and provided by
    City of Chicago
    Description

    NOTE: This dataset has been retired and marked as historical-only.

    Only Chicago residents are included based on the home ZIP Code as provided by the medical provider. If a ZIP was missing or was not valid, it is displayed as "Unknown".

    Cases with a positive molecular (PCR) or antigen test are included in this dataset. Cases are counted based on the week the test specimen was collected. For privacy reasons, until a ZIP Code reaches five cumulative cases, both the weekly and cumulative case counts will be blank. Therefore, summing the “Cases - Weekly” column is not a reliable way to determine case totals. Deaths are those that have occurred among cases based on the week of death.

    For tests, each test is counted once, based on the week the test specimen was collected. Tests performed prior to 3/1/2020 are not included. Test counts include multiple tests for the same person (a change made on 10/29/2020). PCR and antigen tests reported to Chicago Department of Public Health (CDPH) through electronic lab reporting are included. Electronic lab reporting has taken time to onboard and testing availability has shifted over time, so these counts are likely an underestimate of community infection.

    The “Percent Tested Positive” columns are calculated by dividing the number of positive tests by the number of total tests . Because of the data limitations for the Tests columns, such as persons being tested multiple times as a requirement for employment, these percentages may vary in either direction from the actual disease prevalence in the ZIP Code.

    All data are provisional and subject to change. Information is updated as additional details are received.

    To compare ZIP Codes to Chicago Community Areas, please see http://data.cmap.illinois.gov/opendata/uploads/CKAN/NONCENSUS/ADMINISTRATIVE_POLITICAL_BOUNDARIES/CCAzip.pdf. Both ZIP Codes and Community Areas are also geographic datasets on this data portal.

    Data Source: Illinois National Electronic Disease Surveillance System, Cook County Medical Examiner’s Office, Illinois Vital Records, American Community Survey (2018)

  2. U

    United States COVID-19: No. of Deaths: To Date: Illinois

    • ceicdata.com
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    CEICdata.com, United States COVID-19: No. of Deaths: To Date: Illinois [Dataset]. https://www.ceicdata.com/en/united-states/center-for-disease-control-and-prevention-coronavirus-disease-2019-covid2019/covid19-no-of-deaths-to-date-illinois
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    Dataset provided by
    CEICdata.com
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Time period covered
    Nov 23, 2023 - Dec 4, 2023
    Area covered
    United States
    Description

    United States COVID-19: No. of Deaths: To Date: Illinois data was reported at 42,005.000 Person in 10 May 2023. This stayed constant from the previous number of 42,005.000 Person for 09 May 2023. United States COVID-19: No. of Deaths: To Date: Illinois data is updated daily, averaging 27,061.000 Person from Jan 2020 (Median) to 10 May 2023, with 1205 observations. The data reached an all-time high of 42,005.000 Person in 10 May 2023 and a record low of 0.000 Person in 16 Mar 2020. United States COVID-19: No. of Deaths: To Date: Illinois data remains active status in CEIC and is reported by Illinois Department of Public Health. The data is categorized under High Frequency Database’s Disease Outbreaks – Table US.D001: Center for Disease Control and Prevention: Coronavirus Disease 2019 (COVID-2019).

  3. y

    Illinois Coronavirus Cases Currently Hospitalized

    • ycharts.com
    html
    Updated May 6, 2024
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    US Department of Health & Human Services (2024). Illinois Coronavirus Cases Currently Hospitalized [Dataset]. https://ycharts.com/indicators/illinois_coronavirus_cases_currently_hospitalized
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    htmlAvailable download formats
    Dataset updated
    May 6, 2024
    Dataset provided by
    YCharts
    Authors
    US Department of Health & Human Services
    License

    https://www.ycharts.com/termshttps://www.ycharts.com/terms

    Time period covered
    Jul 15, 2020 - Apr 27, 2024
    Area covered
    Illinois
    Variables measured
    Illinois Coronavirus Cases Currently Hospitalized
    Description

    View daily updates and historical trends for Illinois Coronavirus Cases Currently Hospitalized. Source: US Department of Health & Human Services. Track ec…

  4. z

    Counts of COVID-19 reported in ISRAEL: 2019-2021

    • zenodo.org
    • catalog.midasnetwork.us
    • +2more
    json, xml, zip
    Updated Jun 3, 2024
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    MIDAS Coordination Center; MIDAS Coordination Center (2024). Counts of COVID-19 reported in ISRAEL: 2019-2021 [Dataset]. http://doi.org/10.25337/t7/ptycho.v2.0/il.840539006
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    zip, xml, jsonAvailable download formats
    Dataset updated
    Jun 3, 2024
    Dataset provided by
    Project Tycho
    Authors
    MIDAS Coordination Center; MIDAS Coordination Center
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Time period covered
    Dec 30, 2019 - Jul 31, 2021
    Area covered
    Israel
    Description

    Project Tycho datasets contain case counts for reported disease conditions for countries around the world. The Project Tycho data curation team extracts these case counts from various reputable sources, typically from national or international health authorities, such as the US Centers for Disease Control or the World Health Organization. These original data sources include both open- and restricted-access sources. For restricted-access sources, the Project Tycho team has obtained permission for redistribution from data contributors. All datasets contain case count data that are identical to counts published in the original source and no counts have been modified in any way by the Project Tycho team, except for aggregation of individual case count data into daily counts when that was the best data available for a disease and location. The Project Tycho team has pre-processed datasets by adding new variables, such as standard disease and location identifiers, that improve data interpretability. We also formatted the data into a standard data format. All geographic locations at the country and admin1 level have been represented at the same geographic level as in the data source, provided an ISO code or codes could be identified, unless the data source specifies that the location is listed at an inaccurate geographical level. For more information about decisions made by the curation team, recommended data processing steps, and the data sources used, please see the README that is included in the dataset download ZIP file.

  5. Total number of U.S. COVID-19 cases as of March 10, 2023, by state

    • statista.com
    Updated Sep 15, 2022
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    Statista (2022). Total number of U.S. COVID-19 cases as of March 10, 2023, by state [Dataset]. https://www.statista.com/statistics/1102807/coronavirus-covid19-cases-number-us-americans-by-state/
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    Dataset updated
    Sep 15, 2022
    Dataset authored and provided by
    Statistahttp://statista.com/
    Area covered
    United States
    Description

    As of March 10, 2023, the state with the highest number of COVID-19 cases was California. Almost 104 million cases have been reported across the United States, with the states of California, Texas, and Florida reporting the highest numbers.

    From an epidemic to a pandemic The World Health Organization declared the COVID-19 outbreak a pandemic on March 11, 2020. The term pandemic refers to multiple outbreaks of an infectious illness threatening multiple parts of the world at the same time. When the transmission is this widespread, it can no longer be traced back to the country where it originated. The number of COVID-19 cases worldwide has now reached over 669 million.

    The symptoms and those who are most at risk Most people who contract the virus will suffer only mild symptoms, such as a cough, a cold, or a high temperature. However, in more severe cases, the infection can cause breathing difficulties and even pneumonia. Those at higher risk include older persons and people with pre-existing medical conditions, including diabetes, heart disease, and lung disease. People aged 85 years and older have accounted for around 27 percent of all COVID-19 deaths in the United States, although this age group makes up just two percent of the U.S. population

  6. a

    LaSalle County Coronavirus Response

    • coronavirus-disasterresponse.hub.arcgis.com
    Updated Mar 18, 2020
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    La Salle County Illinois GIS (2020). LaSalle County Coronavirus Response [Dataset]. https://coronavirus-disasterresponse.hub.arcgis.com/content/3d34497a094540e5a5590cd9f931a363
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    Dataset updated
    Mar 18, 2020
    Dataset authored and provided by
    La Salle County Illinois GIS
    Area covered
    LaSalle County
    Description

    Discover the latest resources, maps and information about the coronavirus (COVID-19) outbreak in your community

  7. a

    (D) DuPage County Coronavirus Response

    • coronavirus-disasterresponse.hub.arcgis.com
    Updated Mar 18, 2020
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    DuPage County Illinois (2020). (D) DuPage County Coronavirus Response [Dataset]. https://coronavirus-disasterresponse.hub.arcgis.com/content/4d398d6a60d94792b148f9a9002da0bc
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    Dataset updated
    Mar 18, 2020
    Dataset authored and provided by
    DuPage County Illinois
    Area covered
    DuPage County
    Description

    Discover the latest resources, maps and information about the coronavirus (COVID-19) outbreak in your community

  8. e

    Dati coronavirus COVID-19

    • data.europa.eu
    csv, excel xlsx, json +1
    + more versions
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    European Centre for Disease Prevention and Control, Dati coronavirus COVID-19 [Dataset]. https://data.europa.eu/euodp/it/data/dataset/hospital-and-icu-admission-rates-and-occupancy-for-covid-19
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    csv, xml, json, excel xlsxAvailable download formats
    Dataset authored and provided by
    European Centre for Disease Prevention and Control
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Il set di dati contiene gli ultimi dati pubblici disponibili sul COVID-19, tra cui un aggiornamento quotidiano sulla situazione, la curva epidemiologica e la distribuzione geografica globale (UE/SEE e Regno Unito, in tutto il mondo). Il 12 febbraio 2020 il nuovo coronavirus è stato denominato sindrome respiratoria acuta grave da coronavirus 2 (SARS-CoV-2), mentre la malattia ad esso associata è ora denominata COVID-19. L'ECDC sta monitorando da vicino l'epidemia e fornisce valutazioni dei rischi per guidare gli Stati membri dell'UE e la Commissione europea nelle loro attività di risposta.

  9. Rapport dwar il-Mobbiltà tal-coronavirus (COVID-19)

    • data.europa.eu
    Updated Nov 7, 2022
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    Greater London Authority (2022). Rapport dwar il-Mobbiltà tal-coronavirus (COVID-19) [Dataset]. https://data.europa.eu/data/datasets/coronavirus-covid-19-mobility-report?locale=mt
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    Dataset updated
    Nov 7, 2022
    Dataset authored and provided by
    Greater London Authorityhttp://www.london.gov.uk/
    Description

    Due to changes in the collection and availability of data on COVID-19, this website will no longer be updated. The webpage will no longer be available as of 11 May 2023. On-going, reliable sources of data for COVID-19 are available via the COVID-19 dashboard and the UKHSA

    GLA Covid-19 Mobility Report

    Since March 2020, London has seen many different levels of restrictions - including three separate lockdowns and many other tiers/levels of restrictions, as well as easing of restrictions and even measures to actively encourage people to go to work, their high streets and local restaurants. This reports gathers data from a number of sources, including google, apple, citymapper, purple wifi and opentable to assess the extent to which these levels of restrictions have translated to a reductions in Londoners' movements.

    The data behind the charts below come from different sources. None of these data represent a direct measure of how well people are adhering to the lockdown rules - nor do they provide an exhaustive data set. Rather, they are measures of different aspects of mobility, which together, offer an overall impression of how people Londoners are moving around the capital. The information is broken down by use of public transport, pedestrian activity, retail and leisure, and homeworking.

    Public Transport

    For the transport measures, we have included data from google, Apple, CityMapper and Transport for London. They measure different aspects of public transport usage - depending on the data source. Each of the lines in the chart below represents a percentage of a pre-pandemic baseline.

    https://cdn.datapress.cloud/london/img/dataset/60e5834b-68aa-48d7-a8c5-7ee4781bde05/2025-06-09T20%3A54%3A15/6b096426c4c582dc9568ed4830b4226d.webp" alt="Embedded Image" />

    activity Source Latest Baseline Min value in Lockdown 1 Min value in Lockdown 2 Min value in Lockdown 3 Citymapper Citymapper mobility index 2021-09-05 Compares trips planned and trips taken within its app to a baseline of the four weeks from 6 Jan 2020 7.9% 28% 19% Google Google Mobility Report 2022-10-15 Location data shared by users of Android smartphones, compared time and duration of visits to locations to the median values on the same day of the week in the five weeks from 3 Jan 2020 20.4% 40% 27% TfL Bus Transport for London 2022-10-30 Bus journey ‘taps' on the TfL network compared to same day of the week in four weeks starting 13 Jan 2020 - 34% 24% TfL Tube Transport for London 2022-10-30 Tube journey ‘taps' on the TfL network compared to same day of the week in four weeks starting 13 Jan 2020 - 30% 21% Pedestrian activity

    With the data we currently have it's harder to estimate pedestrian activity and high street busyness. A few indicators can give us information on how people are making trips out of the house:

    https://cdn.datapress.cloud/london/img/dataset/60e5834b-68aa-48d7-a8c5-7ee4781bde05/2025-06-09T20%3A54%3A15/bcf082c07e4d7ff5202012f0a97abc3a.webp" alt="Embedded Image" />

    activity Source Latest Baseline Min value in Lockdown 1 Min value in Lockdown 2 Min value in Lockdown 3 Walking Apple Mobility Index 2021-11-09 estimates the frequency of trips made on foot compared to baselie of 13 Jan '20 22% 47% 36% Parks Google Mobility Report 2022-10-15 Frequency of trips to parks. Changes in the weather mean this varies a lot. Compared to baseline of 5 weeks from 3 Jan '20 30% 55% 41% Retail & Rec Google Mobility Report 2022-10-15 Estimates frequency of trips to shops/leisure locations. Compared to baseline of 5 weeks from 3 Jan '20 30% 55% 41% Retail and recreation

    In this section, we focus on estimated footfall to shops, restaurants, cafes, shopping centres and so on.

    https://cdn.datapress.cloud/london/img/dataset/60e5834b-68aa-48d7-a8c5-7ee4781bde05/2025-06-09T20%3A54%3A16/b62d60f723eaafe64a989e4afec4c62b.webp" alt="Embedded Image" />

    activity Source Latest Baseline Min value in Lockdown 1 Min value in Lockdown 2 Min value in Lockdown 3 Grocery/pharmacy Google Mobility Report 2022-10-15 Estimates frequency of trips to grovery shops and pharmacies. Compared to baseline of 5 weeks from 3 Jan '20 32% 55.00% 45.000% Retail/rec <a href="https://ww

  10. COVID-19 death rates in the United States as of March 10, 2023, by state

    • statista.com
    Updated May 15, 2024
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    Statista (2024). COVID-19 death rates in the United States as of March 10, 2023, by state [Dataset]. https://www.statista.com/statistics/1109011/coronavirus-covid19-death-rates-us-by-state/
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    Dataset updated
    May 15, 2024
    Dataset authored and provided by
    Statistahttp://statista.com/
    Area covered
    United States
    Description

    As of March 10, 2023, the death rate from COVID-19 in the state of New York was 397 per 100,000 people. New York is one of the states with the highest number of COVID-19 cases.

  11. COVID-Like Illness (CLI) and COVID-19 Diagnosis Emergency Department Visits...

    • healthdata.gov
    • data.cityofchicago.org
    • +1more
    application/rdfxml +5
    Updated Apr 8, 2025
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    data.cityofchicago.org (2025). COVID-Like Illness (CLI) and COVID-19 Diagnosis Emergency Department Visits - Historical [Dataset]. https://healthdata.gov/dataset/COVID-Like-Illness-CLI-and-COVID-19-Diagnosis-Emer/gsyn-fzqq
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    csv, json, tsv, application/rdfxml, xml, application/rssxmlAvailable download formats
    Dataset updated
    Apr 8, 2025
    Dataset provided by
    data.cityofchicago.org
    Description

    NOTE: This dataset is no longer being updated but is being kept for historical reference. For current data on respiratory illness visits and respiratory laboratory testing data please see Influenza, COVID-19, RSV, and Other Respiratory Virus Laboratory Surveillance and Inpatient, Emergency Department, and Outpatient Visits for Respiratory Illnesses.

    This is the place to look for important information about how to use this dataset, so please expand this box and read on!

    This is the source data for some of the metrics available at https://www.chicago.gov/city/en/sites/covid-19/home/reopening-chicago.html#reopeningmetrics.

    For all datasets related to COVID-19, see https://data.cityofchicago.org/browse?limitTo=datasets&sortBy=alpha&tags=covid-19.

    The National Syndromic Surveillance Program (NSSP), a collaboration among CDC, federal partners, local and state health departments, and academic and private sector partners, is used to capture information during an Emergency Department (ED) visit. ED data can include information that are collected before cases are diagnosed or laboratory results are confirmed, providing an early warning system for infections, like COVID-19.

    This dataset includes reports of COVID-19-Like illness (CLI) and COVID-19 diagnosed during an ED visit. CLI is defined as fever and cough or shortness of breath or difficulty breathing with or without the presence of a coronavirus diagnosis code. Visits meeting the CLI definition that also have mention of flu or influenza are excluded.

    This dataset also includes ED visits among persons who have been diagnosed or laboratory confirmed to have COVID-19. During the initial months of the COVID-19 pandemic COVID-19 diagnoses counts are artificially low, due to varying eligibility requirements and availability of testing.

    Over the course of the COVID-19 pandemic, public health best practices migrated from focusing on CLI to focusing on diagnosed cases. This dataset originally contained only CLI columns. In June 2021, the diagnosis columns were added, back filled to the start of the pandemic but with the caveat noted above. Roughly simultaneously, updating of the CLI columns was discontinued, although previously existing data were kept. Reflecting the new columns, the name of the dataset was changed from “COVID-Like Illness (CLI) Emergency Department Visits” to “COVID-Like Illness (CLI) and COVID-19 Diagnosis Emergency Department Visits” at the same time.

    Data Source: Illinois Hospital Emergency Departments reporting to CDPH through the National Syndromic Surveillance Project (NSSP)

  12. f

    Data_Sheet_1_T-Cell Subsets and Interleukin-10 Levels Are Predictors of...

    • frontiersin.figshare.com
    pdf
    Updated Jun 15, 2023
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    Amal F. Alshammary; Jawaher M. Alsughayyir; Khalid K. Alharbi; Abdulrahman M. Al-Sulaiman; Haifa F. Alshammary; Heba F. Alshammary (2023). Data_Sheet_1_T-Cell Subsets and Interleukin-10 Levels Are Predictors of Severity and Mortality in COVID-19: A Systematic Review and Meta-Analysis.pdf [Dataset]. http://doi.org/10.3389/fmed.2022.852749.s001
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    pdfAvailable download formats
    Dataset updated
    Jun 15, 2023
    Dataset provided by
    Frontiers
    Authors
    Amal F. Alshammary; Jawaher M. Alsughayyir; Khalid K. Alharbi; Abdulrahman M. Al-Sulaiman; Haifa F. Alshammary; Heba F. Alshammary
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    BackgroundMany COVID-19 patients reveal a marked decrease in their lymphocyte counts, a condition that translates clinically into immunodepression and is common among these patients. Outcomes for infected patients vary depending on their lymphocytopenia status, especially their T-cell counts. Patients are more likely to recover when lymphocytopenia is resolved. When lymphocytopenia persists, severe complications can develop and often lead to death. Similarly, IL-10 concentration is elevated in severe COVID-19 cases and may be associated with the depression observed in T-cell counts. Accordingly, this systematic review and meta-analysis aims to analyze T-cell subsets and IL-10 levels among COVID-19 patients. Understanding the underlying mechanisms of the immunodepression observed in COVID-19, and its consequences, may enable early identification of disease severity and reduction of overall morbidity and mortality.MethodsA systematic search was conducted covering PubMed MEDLINE, Scopus, Web of Science, and EBSCO databases for journal articles published from December 1, 2019 to March 14, 2021. In addition, we reviewed bibliographies of relevant reviews and the medRxiv preprint server for eligible studies. Our search covered published studies reporting laboratory parameters for T-cell subsets (CD4/CD8) and IL-10 among confirmed COVID-19 patients. Six authors carried out the process of data screening, extraction, and quality assessment independently. The DerSimonian-Laird random-effect model was performed for this meta-analysis, and the standardized mean difference (SMD) and 95% confidence interval (CI) were calculated for each parameter.ResultsA total of 52 studies from 11 countries across 3 continents were included in this study. Compared with mild and survivor COVID-19 cases, severe and non-survivor cases had lower counts of CD4/CD8 T-cells and higher levels of IL-10.ConclusionOur findings reveal that the level of CD4/CD8 T-cells and IL-10 are reliable predictors of severity and mortality in COVID-19 patients. The study protocol is registered with the International Prospective Register of Systematic Reviews (PROSPERO); registration number CRD42020218918.Systematic Review Registrationhttps://www.crd.york.ac.uk/prospero/display_record.php?ID=CRD42020218918, identifier: CRD42020218918.

  13. f

    Data from: Serum Proteomics in COVID-19 Patients: Altered Coagulation and...

    • acs.figshare.com
    • datasetcatalog.nlm.nih.gov
    xlsx
    Updated May 31, 2023
    + more versions
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    Angelo D’Alessandro; Tiffany Thomas; Monika Dzieciatkowska; Ryan C. Hill; Richard O. Francis; Krystalyn E. Hudson; James C. Zimring; Eldad A. Hod; Steven L. Spitalnik; Kirk C. Hansen (2023). Serum Proteomics in COVID-19 Patients: Altered Coagulation and Complement Status as a Function of IL‑6 Level [Dataset]. http://doi.org/10.1021/acs.jproteome.0c00365.s002
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    xlsxAvailable download formats
    Dataset updated
    May 31, 2023
    Dataset provided by
    ACS Publications
    Authors
    Angelo D’Alessandro; Tiffany Thomas; Monika Dzieciatkowska; Ryan C. Hill; Richard O. Francis; Krystalyn E. Hudson; James C. Zimring; Eldad A. Hod; Steven L. Spitalnik; Kirk C. Hansen
    License

    Attribution-NonCommercial 4.0 (CC BY-NC 4.0)https://creativecommons.org/licenses/by-nc/4.0/
    License information was derived automatically

    Description

    Over 5 million people around the world have tested positive for the beta coronavirus SARS-CoV-2 as of May 29, 2020, a third of which are in the United States alone. These infections are associated with the development of a disease known as COVID-19, which is characterized by several symptoms, including persistent dry cough, shortness of breath, chills, muscle pain, headache, loss of taste or smell, and gastrointestinal distress. COVID-19 has been characterized by elevated mortality (over 100 thousand people have already died in the US alone), mostly due to thromboinflammatory complications that impair lung perfusion and systemic oxygenation in the most severe cases. While the levels of pro-inflammatory cytokines such as interleukin-6 (IL-6) have been associated with the severity of the disease, little is known about the impact of IL-6 levels on the proteome of COVID-19 patients. The present study provides the first proteomics analysis of sera from COVID-19 patients, stratified by circulating levels of IL-6, and correlated to markers of inflammation and renal function. As a function of IL-6 levels, we identified significant dysregulation in serum levels of various coagulation factors, accompanied by increased levels of antifibrinolytic components, including several serine protease inhibitors (SERPINs). These were accompanied by up-regulation of the complement cascade and antimicrobial enzymes, especially in subjects with the highest levels of IL-6, which is consistent with an exacerbation of the acute phase response in these subjects. Although our results are observational, they highlight a clear increase in the levels of inhibitory components of the fibrinolytic cascade in severe COVID-19 disease, providing potential clues related to the etiology of coagulopathic complications in COVID-19 and paving the way for potential therapeutic interventions, such as the use of pro-fibrinolytic agents. Raw data for this study are available through ProteomeXchange with identifier PXD020601.

  14. a

    Coronavirus COVID-19 en France - Ancien régional

    • demo-coronavirus-response-teamdev.hub.arcgis.com
    • contraloria-demo-tec-esri-co.hub.arcgis.com
    Updated Mar 9, 2020
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    MapTheNews (2020). Coronavirus COVID-19 en France - Ancien régional [Dataset]. https://demo-coronavirus-response-teamdev.hub.arcgis.com/items/5e09dff7cb434fb194e22261689e2887
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    Dataset updated
    Mar 9, 2020
    Dataset authored and provided by
    MapTheNews
    Area covered
    Description

    Ce tableau de bord fournit une mise à jour quotidienne de la progression du Coronavirus COVID-19 en France (Métropole et DOM).Il se base sur les données publiées quotidiennement par Santé Publique France.Il comptabilise et représente :Le nombre de cas confirmés au niveau nationalLe nombre de décès au niveau nationalLe nombre de cas confirmés par région (sous forme de graphique et de carte par symboles proportionnels)La part des cas confirmés par rapport à la population, par région (sous forme de carte par dégradé de couleurs)L'évolution dans le temps du nombre de cas confirmés (sous forme de graphique) Il est optimisé pour être affiché sur un navigateur web (ordinateur ou tablette).Il fournit également un lien vers le tableau de bord national en version optimisée pour mobile.Visiter le site Esri France

  15. f

    Table_1_Clinical and Immunological Factors That Distinguish COVID-19 From...

    • datasetcatalog.nlm.nih.gov
    • frontiersin.figshare.com
    Updated Apr 21, 2021
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    Barreto-Rodríguez, José Omar; Rodríguez-Reyna, Tatiana Sofía; Mendoza-Milla, Criselda; Domínguez, Andrea; Zlotnik, Albert; Martinez-Sánchez, Mariana Esther; Hernández-García, Diana Lizzeth; Balderas-Martínez, Yalbi I.; Vázquez-Rojas, Hazel; Regalado, Justino; Centeno-Sáenz, Gustavo Iván; Alvarado-Peña, Néstor; Galeana-Cadena, David; Hernández-Martínez, Angélica; Choreño-Parra, Eduardo M.; Mena-Hernández, Lula; Pérez-Buenfil, Luis Ángel; Sánchez-Garibay, Carlos; Salas-Hernández, Jorge; Márquez-García, Eduardo; Hernández-Cárdenas, Carmen M.; Cabello-Gutiérrez, Carlos; Jiménez-Álvarez, Luis Armando; Santillán-Doherty, Patricio; Moreno-Rodríguez, José; Khader, Shabaana A.; García-Latorre, Ethel A.; Sciutto, Edda; Cruz-Lagunas, Alfredo; Ávila-Moreno, Federico; Zúñiga, Joaquín; Luna-Rivero, Cesar; Ramírez-Martínez, Gustavo; Granados, Julio; Salinas-Lara, Citlaltepetl; Sandoval-Vega, Montserrat; Domínguez-Cheritt, Guillermo; Orozco, Lorena; Choreño-Parra, José Alberto; Hernández, Gabriela (2021). Table_1_Clinical and Immunological Factors That Distinguish COVID-19 From Pandemic Influenza A(H1N1).docx [Dataset]. https://datasetcatalog.nlm.nih.gov/dataset?q=0000846507
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    Dataset updated
    Apr 21, 2021
    Authors
    Barreto-Rodríguez, José Omar; Rodríguez-Reyna, Tatiana Sofía; Mendoza-Milla, Criselda; Domínguez, Andrea; Zlotnik, Albert; Martinez-Sánchez, Mariana Esther; Hernández-García, Diana Lizzeth; Balderas-Martínez, Yalbi I.; Vázquez-Rojas, Hazel; Regalado, Justino; Centeno-Sáenz, Gustavo Iván; Alvarado-Peña, Néstor; Galeana-Cadena, David; Hernández-Martínez, Angélica; Choreño-Parra, Eduardo M.; Mena-Hernández, Lula; Pérez-Buenfil, Luis Ángel; Sánchez-Garibay, Carlos; Salas-Hernández, Jorge; Márquez-García, Eduardo; Hernández-Cárdenas, Carmen M.; Cabello-Gutiérrez, Carlos; Jiménez-Álvarez, Luis Armando; Santillán-Doherty, Patricio; Moreno-Rodríguez, José; Khader, Shabaana A.; García-Latorre, Ethel A.; Sciutto, Edda; Cruz-Lagunas, Alfredo; Ávila-Moreno, Federico; Zúñiga, Joaquín; Luna-Rivero, Cesar; Ramírez-Martínez, Gustavo; Granados, Julio; Salinas-Lara, Citlaltepetl; Sandoval-Vega, Montserrat; Domínguez-Cheritt, Guillermo; Orozco, Lorena; Choreño-Parra, José Alberto; Hernández, Gabriela
    Description

    The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of coronavirus disease 2019 (COVID-19), is a global health threat with the potential to cause severe disease manifestations in the lungs. Although COVID-19 has been extensively characterized clinically, the factors distinguishing SARS-CoV-2 from other respiratory viruses are unknown. Here, we compared the clinical, histopathological, and immunological characteristics of patients with COVID-19 and pandemic influenza A(H1N1). We observed a higher frequency of respiratory symptoms, increased tissue injury markers, and a histological pattern of alveolar pneumonia in pandemic influenza A(H1N1) patients. Conversely, dry cough, gastrointestinal symptoms and interstitial lung pathology were observed in COVID-19 cases. Pandemic influenza A(H1N1) was characterized by higher levels of IL-1RA, TNF-α, CCL3, G-CSF, APRIL, sTNF-R1, sTNF-R2, sCD30, and sCD163. Meanwhile, COVID-19 displayed an immune profile distinguished by increased Th1 (IL-12, IFN-γ) and Th2 (IL-4, IL-5, IL-10, IL-13) cytokine levels, along with IL-1β, IL-6, CCL11, VEGF, TWEAK, TSLP, MMP-1, and MMP-3. Our data suggest that SARS-CoV-2 induces a dysbalanced polyfunctional inflammatory response that is different from the immune response against pandemic influenza A(H1N1). Furthermore, we demonstrated the diagnostic potential of some clinical and immune factors to differentiate both diseases. These findings might be relevant for the ongoing and future influenza seasons in the Northern Hemisphere, which are historically unique due to their convergence with the COVID-19 pandemic.

  16. Z

    Data from: Politics overwhelms science in the Covid-19 pandemic: evidence...

    • data.niaid.nih.gov
    Updated Apr 1, 2021
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    Giardullo, Paolo (2021). Data from: Politics overwhelms science in the Covid-19 pandemic: evidence from the whole coverage of the Italian quality newspapers [Dataset]. https://data.niaid.nih.gov/resources?id=zenodo_4624095
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    Dataset updated
    Apr 1, 2021
    Dataset provided by
    Sciandra, Andrea
    Crabu, Stefano
    Neresini, Federico
    Giardullo, Paolo
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    "SARS-CoV-2 general corpus" includes Italian newspaper articles published in the timespan between January 1, 2020 and June 15, 2020, containing at least one of the following terms: [covid, corona virus, OR coronavirus]. Sources: Corriere della Sera, La Repubblica, Il Sole – 24 Ore, La Stampa, Avvenire, Il Giornale, Il Mattino di Napoli, Il Messaggero.

  17. f

    Table_1_Cytokine Signature Associated With Disease Severity in COVID-19.xlsx...

    • datasetcatalog.nlm.nih.gov
    • figshare.com
    Updated Aug 20, 2021
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    Gao, Hainv; Qiu, Yunqing; Xia, He; Zheng, Shufa; Chen, Yanfei; Zuo, Jian; Ji, Zhongkang; Xu, Xiaowei; Guo, Feifei; Xu, Yan; Chen, Yu; Wang, Shuting; Guo, Jing; Xu, Kaijin; Li, Lanjuan; Shi, Ding; Zhu, Chunxia; Chen, Yunbo; Xia, Jiafeng; Huang, Chenjie; Luo, Rui; Zhang, Yan; Sheng, Jifang (2021). Table_1_Cytokine Signature Associated With Disease Severity in COVID-19.xlsx [Dataset]. https://datasetcatalog.nlm.nih.gov/dataset?q=0000765020
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    Dataset updated
    Aug 20, 2021
    Authors
    Gao, Hainv; Qiu, Yunqing; Xia, He; Zheng, Shufa; Chen, Yanfei; Zuo, Jian; Ji, Zhongkang; Xu, Xiaowei; Guo, Feifei; Xu, Yan; Chen, Yu; Wang, Shuting; Guo, Jing; Xu, Kaijin; Li, Lanjuan; Shi, Ding; Zhu, Chunxia; Chen, Yunbo; Xia, Jiafeng; Huang, Chenjie; Luo, Rui; Zhang, Yan; Sheng, Jifang
    Description

    Coronavirus disease 2019 (COVID-19) broke out and then became a global epidemic at the end of 2019. With the increasing number of deaths, early identification of disease severity and interpretation of pathogenesis are very important. Aiming to identify biomarkers for disease severity and progression of COVID-19, 75 COVID-19 patients, 34 healthy controls and 23 patients with pandemic influenza A(H1N1) were recruited in this study. Using liquid chip technology, 48 cytokines and chemokines were examined, among which 33 were significantly elevated in COVID-19 patients compared with healthy controls. HGF and IL-1β were strongly associated with APACHE II score in the first week after disease onset. IP-10, HGF and IL-10 were correlated positively with virus titers. Cytokines were significantly correlated with creatinine, troponin I, international normalized ratio and procalcitonin within two weeks after disease onset. Univariate analyses were carried out, and 6 cytokines including G-CSF, HGF, IL-10, IL-18, M-CSF and SCGF-β were found to be associated with the severity of COVID-19. 11 kinds of cytokines could predict the severity of COVID-19, among which IP-10 and M-CSF were excellent predictors for disease severity. In conclusion, the levels of cytokines in COVID-19 were significantly correlated with the severity of the disease in the early stage, and serum cytokines could be used as warning indicators of the severity and progression of COVID-19. Early stratification of disease and intervention to reduce hypercytokinaemia may improve the prognosis of COVID-19 patients.

  18. f

    Table_1_CSF Biomarkers in COVID-19 Associated Encephalopathy and...

    • frontiersin.figshare.com
    • datasetcatalog.nlm.nih.gov
    docx
    Updated Jun 14, 2023
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    Mar Guasp; Guillermo Muñoz-Sánchez; Eugenia Martínez-Hernández; Daniel Santana; Álvaro Carbayo; Laura Naranjo; Uma Bolós; Mario Framil; Albert Saiz; Mircea Balasa; Raquel Ruiz-García; Raquel Sánchez-Valle; The Barcelona Neuro-COVID Study Group (2023). Table_1_CSF Biomarkers in COVID-19 Associated Encephalopathy and Encephalitis Predict Long-Term Outcome.docx [Dataset]. http://doi.org/10.3389/fimmu.2022.866153.s002
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    docxAvailable download formats
    Dataset updated
    Jun 14, 2023
    Dataset provided by
    Frontiers
    Authors
    Mar Guasp; Guillermo Muñoz-Sánchez; Eugenia Martínez-Hernández; Daniel Santana; Álvaro Carbayo; Laura Naranjo; Uma Bolós; Mario Framil; Albert Saiz; Mircea Balasa; Raquel Ruiz-García; Raquel Sánchez-Valle; The Barcelona Neuro-COVID Study Group
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Patients with coronavirus disease 2019 (COVID-19) frequently develop acute encephalopathy and encephalitis, but whether these complications are the result from viral-induced cytokine storm syndrome or anti-neural autoimmunity is still unclear. In this study, we aimed to evaluate the diagnostic and prognostic role of CSF and serum biomarkers of inflammation (a wide array of cytokines, antibodies against neural antigens, and IgG oligoclonal bands), and neuroaxonal damage (14-3-3 protein and neurofilament light [NfL]) in patients with acute COVID-19 and associated neurologic manifestations (neuro-COVID). We prospectively included 60 hospitalized neuro-COVID patients, 25 (42%) of them with encephalopathy and 14 (23%) with encephalitis, and followed them for 18 months. We found that, compared to healthy controls (HC), neuro-COVID patients presented elevated levels of IL-18, IL-6, and IL-8 in both serum and CSF. MCP1 was elevated only in CSF, while IL-10, IL-1RA, IP-10, MIG and NfL were increased only in serum. Patients with COVID-associated encephalitis or encephalopathy had distinct serum and CSF cytokine profiles compared with HC, but no differences were found when both clinical groups were compared to each other. Antibodies against neural antigens were negative in both groups. While the levels of neuroaxonal damage markers, 14-3-3 and NfL, and the proinflammatory cytokines IL-18, IL-1RA and IL-8 significantly associated with acute COVID-19 severity, only the levels of 14-3-3 and NfL in CSF significantly correlated with the degree of neurologic disability in the daily activities at 18 months follow-up. Thus, the inflammatory process promoted by SARS-CoV-2 infection might include blood-brain barrier disruption in patients with neurological involvement. In conclusion, the fact that the levels of pro-inflammatory cytokines do not predict the long-term functional outcome suggests that the prognosis is more related to neuronal damage than to the acute neuroinflammatory process.

  19. I

    Data from: Differential Cytokine Signatures of Severe Acute Respiratory...

    • data.niaid.nih.gov
    url
    Updated Jun 27, 2024
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    (2024). Differential Cytokine Signatures of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and Influenza Infection Highlight Key Differences in Pathobiology [Dataset]. http://doi.org/10.21430/M3WLQZ3CGN
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    urlAvailable download formats
    Dataset updated
    Jun 27, 2024
    License

    https://www.immport.org/agreementhttps://www.immport.org/agreement

    Description

    Background: Several inflammatory cytokines are upregulated in severe coronavirus disease 2019 (COVID-19). We compared cytokines in COVID-19 versus influenza to define differentiating features of the inflammatory response to these pathogens and their association with severe disease. Because elevated body mass index (BMI) is a known risk factor for severe COVID-19, we examined the relationship of BMI to cytokines associated with severe disease. Methods: Thirty-seven cytokines and chemokines were measured in plasma from 135 patients with COVID-19, 57 patients with influenza, and 30 healthy controls. Controlling for BMI, age, and sex, differences in cytokines between groups were determined by linear regression and random forest prediction was used to determine the cytokines most important in distinguishing severe COVID-19 and influenza. Mediation analysis was used to identify cytokines that mediate the effect of BMI and age on disease severity. Results: Interleukin-18 (IL-18), IL-1β, IL-6, and tumor necrosis factor-α (TNF-α) were significantly increased in COVID-19 versus influenza patients, whereas granulocyte macrophage colony-stimulating factor, interferon-γ (IFN-γ), IFN-λ1, IL-10, IL-15, and monocyte chemoattractant protein 2 were significantly elevated in the influenza group. In subgroup analysis based on disease severity, IL-18, IL-6, and TNF-α were elevated in severe COVID-19, but not in severe influenza. Random forest analysis identified high IL-6 and low IFN-λ1 levels as the most distinct between severe COVID-19 and severe influenza. Finally, IL-1RA was identified as a potential mediator of the effects of BMI on COVID-19 severity. Conclusions: These findings point to activation of fundamentally different innate immune pathways in severe acute respiratory syndrome coronavirus 2 and influenza infection, and emphasize drivers of severe COVID-19 to focus both mechanistic and therapeutic investigations.

  20. f

    Table_1_Addition of Tocilizumab to the Standard of Care Reduces Mortality in...

    • frontiersin.figshare.com
    docx
    Updated Jun 3, 2023
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    Umesha Boregowda; Abhilash Perisetti; Arpitha Nanjappa; Mahesh Gajendran; Gurusaravanan Kutti Sridharan; Hemant Goyal (2023). Table_1_Addition of Tocilizumab to the Standard of Care Reduces Mortality in Severe COVID-19: A Systematic Review and Meta-Analysis.docx [Dataset]. http://doi.org/10.3389/fmed.2020.586221.s003
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    docxAvailable download formats
    Dataset updated
    Jun 3, 2023
    Dataset provided by
    Frontiers
    Authors
    Umesha Boregowda; Abhilash Perisetti; Arpitha Nanjappa; Mahesh Gajendran; Gurusaravanan Kutti Sridharan; Hemant Goyal
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Introduction: Tocilizumab (TCZ) is an anti-interleukin-6 antibody that has been used for the treatment of severe coronavirus disease 2019 (COVID-19). However, concrete evidence of its benefit in reducing mortality in severe COVID-19 is lacking. Therefore, we performed a systematic review and meta-analysis of relevant studies that compared the efficacy of TCZ in severe COVID-19 vs. standard of care (SOC) alone.Methods: A literature search for studies that compared “tocilizumab” and “standard of care” in the treatment of COVID-19 was done using major online databases from December 2019 to June 14, 2020. Search words “Tocilizumab,” “anti-interleukin-6 antibody,” and “COVID-19” or “coronavirus 2019” in various combinations were used. Articles in the form of abstracts, letters without original data, case reports, and reviews were excluded. Data were gathered on an Excel sheet, and statistical analysis was performed using Review Manager 5.3.Results: Sixteen studies were eligible from 693 initial studies, including 3,641 patients (64% males). There were 13 retrospective studies and three prospective studies. There were 2,488 patients in the SOC group (61.7%) and 1,153 patients (68.7%) in the TCZ group. The death rate in the TCZ group, 22.4% (258/1,153), was lower than in the SOC group, 26.21% (652/2,488) [pooled odds ratio 0.57 (95% CI 0.36–0.92), p = 0.02]. There was a significant heterogeneity (inconsistency index = 80%) among the included studies.Conclusion: The addition of TCZ to the SOC might reduce mortality in severe COVID-19. More extensive randomized clinical trials are needed to validate these findings.

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City of Chicago (2024). COVID-19 Cases, Tests, and Deaths by ZIP Code - Historical [Dataset]. https://data.cityofchicago.org/Health-Human-Services/COVID-19-Cases-Tests-and-Deaths-by-ZIP-Code-Histor/yhhz-zm2v

COVID-19 Cases, Tests, and Deaths by ZIP Code - Historical

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kml, xml, csv, kmz, xlsx, application/geo+jsonAvailable download formats
Dataset updated
May 23, 2024
Dataset authored and provided by
City of Chicago
Description

NOTE: This dataset has been retired and marked as historical-only.

Only Chicago residents are included based on the home ZIP Code as provided by the medical provider. If a ZIP was missing or was not valid, it is displayed as "Unknown".

Cases with a positive molecular (PCR) or antigen test are included in this dataset. Cases are counted based on the week the test specimen was collected. For privacy reasons, until a ZIP Code reaches five cumulative cases, both the weekly and cumulative case counts will be blank. Therefore, summing the “Cases - Weekly” column is not a reliable way to determine case totals. Deaths are those that have occurred among cases based on the week of death.

For tests, each test is counted once, based on the week the test specimen was collected. Tests performed prior to 3/1/2020 are not included. Test counts include multiple tests for the same person (a change made on 10/29/2020). PCR and antigen tests reported to Chicago Department of Public Health (CDPH) through electronic lab reporting are included. Electronic lab reporting has taken time to onboard and testing availability has shifted over time, so these counts are likely an underestimate of community infection.

The “Percent Tested Positive” columns are calculated by dividing the number of positive tests by the number of total tests . Because of the data limitations for the Tests columns, such as persons being tested multiple times as a requirement for employment, these percentages may vary in either direction from the actual disease prevalence in the ZIP Code.

All data are provisional and subject to change. Information is updated as additional details are received.

To compare ZIP Codes to Chicago Community Areas, please see http://data.cmap.illinois.gov/opendata/uploads/CKAN/NONCENSUS/ADMINISTRATIVE_POLITICAL_BOUNDARIES/CCAzip.pdf. Both ZIP Codes and Community Areas are also geographic datasets on this data portal.

Data Source: Illinois National Electronic Disease Surveillance System, Cook County Medical Examiner’s Office, Illinois Vital Records, American Community Survey (2018)

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