100+ datasets found
  1. g

    Coronavirus (Covid-19) Data in the United States

    • github.com
    • openicpsr.org
    • +3more
    csv
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    New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://github.com/nytimes/covid-19-data
    Explore at:
    csvAvailable download formats
    Dataset provided by
    New York Times
    License

    https://github.com/nytimes/covid-19-data/blob/master/LICENSEhttps://github.com/nytimes/covid-19-data/blob/master/LICENSE

    Description

    The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

    Since the first reported coronavirus case in Washington State on Jan. 21, 2020, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

    We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

    The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

  2. Diagnosis codes used to identify comorbidities.

    • plos.figshare.com
    txt
    Updated Jun 12, 2023
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    Ishan Paranjpe; Kumardeep Chaudhary; Kipp W. Johnson; Suraj K. Jaladanki; Shan Zhao; Jessica K. De Freitas; Elisabet Pujdas; Fayzan Chaudhry; Erwin P. Bottinger; Matthew A. Levin; Zahi A. Fayad; Alexander W. Charney; Jane Houldsworth; Carlos Cordon-Cardo; Benjamin S. Glicksberg; Girish N. Nadkarni (2023). Diagnosis codes used to identify comorbidities. [Dataset]. http://doi.org/10.1371/journal.pone.0247366.s001
    Explore at:
    txtAvailable download formats
    Dataset updated
    Jun 12, 2023
    Dataset provided by
    PLOShttp://plos.org/
    Authors
    Ishan Paranjpe; Kumardeep Chaudhary; Kipp W. Johnson; Suraj K. Jaladanki; Shan Zhao; Jessica K. De Freitas; Elisabet Pujdas; Fayzan Chaudhry; Erwin P. Bottinger; Matthew A. Levin; Zahi A. Fayad; Alexander W. Charney; Jane Houldsworth; Carlos Cordon-Cardo; Benjamin S. Glicksberg; Girish N. Nadkarni
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Individual diagnosis codes were extracted from each patient’s electronic health record. Patients were identified as having a specific comorbidity if they had at least one of the corresponding diagnosis codes in their record. (CSV)

  3. m

    Data for: COVID-19 Dataset: Worldwide Spread Log Including Countries First...

    • data.mendeley.com
    Updated Jul 20, 2020
    + more versions
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    Hasmot Ali (2020). Data for: COVID-19 Dataset: Worldwide Spread Log Including Countries First Case And First Death [Dataset]. http://doi.org/10.17632/vw427wzzkk.4
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    Dataset updated
    Jul 20, 2020
    Authors
    Hasmot Ali
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Contain informative data related to COVID-19 pandemic. Specially, figure out about the First Case and First Death information for every single country. First Case information consist of Date of First Case(s), Number of confirm Case(s) at First Day, Age of the patient(s) of First Case, Last Visited Country and the First Death information consist of Date of First Death and Age of the Patient who died first for every Country mentioning corresponding Continent. The datasets also contain the Binary Matrix of spread chain among different country and region.

  4. Forestry And Logging Global Market Report 2020-30: Covid 19 Impact and...

    • thebusinessresearchcompany.com
    pdf,excel,csv,ppt
    Updated Apr 21, 2020
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    The Business Research Company (2020). Forestry And Logging Global Market Report 2020-30: Covid 19 Impact and Recovery [Dataset]. https://www.thebusinessresearchcompany.com/report/forestry-and-logging-global-market-report-2020-30-covid-19-impact-and-recovery
    Explore at:
    pdf,excel,csv,pptAvailable download formats
    Dataset updated
    Apr 21, 2020
    Dataset authored and provided by
    The Business Research Company
    License

    https://www.thebusinessresearchcompany.com/privacy-policyhttps://www.thebusinessresearchcompany.com/privacy-policy

    Description

    Global Forestry And Logging Market Report by The Business Research Company is segmented as Construction, Insutrial Goods, Others

  5. United States COVID-19 Community Levels by County

    • data.virginia.gov
    • healthdata.gov
    • +1more
    csv, json, rdf, xsl
    Updated Feb 23, 2025
    + more versions
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    Centers for Disease Control and Prevention (2025). United States COVID-19 Community Levels by County [Dataset]. https://data.virginia.gov/dataset/united-states-covid-19-community-levels-by-county
    Explore at:
    xsl, json, rdf, csvAvailable download formats
    Dataset updated
    Feb 23, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Area covered
    United States
    Description

    Reporting of Aggregate Case and Death Count data was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. Although these data will continue to be publicly available, this dataset will no longer be updated.

    This archived public use dataset has 11 data elements reflecting United States COVID-19 community levels for all available counties.

    The COVID-19 community levels were developed using a combination of three metrics — new COVID-19 admissions per 100,000 population in the past 7 days, the percent of staffed inpatient beds occupied by COVID-19 patients, and total new COVID-19 cases per 100,000 population in the past 7 days. The COVID-19 community level was determined by the higher of the new admissions and inpatient beds metrics, based on the current level of new cases per 100,000 population in the past 7 days. New COVID-19 admissions and the percent of staffed inpatient beds occupied represent the current potential for strain on the health system. Data on new cases acts as an early warning indicator of potential increases in health system strain in the event of a COVID-19 surge.

    Using these data, the COVID-19 community level was classified as low, medium, or high.

    COVID-19 Community Levels were used to help communities and individuals make decisions based on their local context and their unique needs. Community vaccination coverage and other local information, like early alerts from surveillance, such as through wastewater or the number of emergency department visits for COVID-19, when available, can also inform decision making for health officials and individuals.

    For the most accurate and up-to-date data for any county or state, visit the relevant health department website. COVID Data Tracker may display data that differ from state and local websites. This can be due to differences in how data were collected, how metrics were calculated, or the timing of web updates.

    Archived Data Notes:

    This dataset was renamed from "United States COVID-19 Community Levels by County as Originally Posted" to "United States COVID-19 Community Levels by County" on March 31, 2022.

    March 31, 2022: Column name for county population was changed to “county_population”. No change was made to the data points previous released.

    March 31, 2022: New column, “health_service_area_population”, was added to the dataset to denote the total population in the designated Health Service Area based on 2019 Census estimate.

    March 31, 2022: FIPS codes for territories American Samoa, Guam, Commonwealth of the Northern Mariana Islands, and United States Virgin Islands were re-formatted to 5-digit numeric for records released on 3/3/2022 to be consistent with other records in the dataset.

    March 31, 2022: Changes were made to the text fields in variables “county”, “state”, and “health_service_area” so the formats are consistent across releases.

    March 31, 2022: The “%” sign was removed from the text field in column “covid_inpatient_bed_utilization”. No change was made to the data. As indicated in the column description, values in this column represent the percentage of staffed inpatient beds occupied by COVID-19 patients (7-day average).

    March 31, 2022: Data values for columns, “county_population”, “health_service_area_number”, and “health_service_area” were backfilled for records released on 2/24/2022. These columns were added since the week of 3/3/2022, thus the values were previously missing for records released the week prior.

    April 7, 2022: Updates made to data released on 3/24/2022 for Guam, Commonwealth of the Northern Mariana Islands, and United States Virgin Islands to correct a data mapping error.

    April 21, 2022: COVID-19 Community Level (CCL) data released for counties in Nebraska for the week of April 21, 2022 have 3 counties identified in the high category and 37 in the medium category. CDC has been working with state officials t

  6. g

    Coronavirus COVID-19 Global Cases by the Center for Systems Science and...

    • github.com
    • systems.jhu.edu
    • +1more
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    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE), Coronavirus COVID-19 Global Cases by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University (JHU) [Dataset]. https://github.com/CSSEGISandData/COVID-19
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    Dataset provided by
    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE)
    Area covered
    Global
    Description

    2019 Novel Coronavirus COVID-19 (2019-nCoV) Visual Dashboard and Map:
    https://www.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6

    • Confirmed Cases by Country/Region/Sovereignty
    • Confirmed Cases by Province/State/Dependency
    • Deaths
    • Recovered

    Downloadable data:
    https://github.com/CSSEGISandData/COVID-19

    Additional Information about the Visual Dashboard:
    https://systems.jhu.edu/research/public-health/ncov

  7. ArcGIS Pro COVID-19 Modeling Toolbox (Version 5 - Updated 11 MAY 2020)

    • prep-response-portal.napsgfoundation.org
    • prep-response-portal-napsg.hub.arcgis.com
    Updated Apr 3, 2020
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    Esri’s Disaster Response Program (2020). ArcGIS Pro COVID-19 Modeling Toolbox (Version 5 - Updated 11 MAY 2020) [Dataset]. https://prep-response-portal.napsgfoundation.org/datasets/disasterresponse::arcgis-pro-covid-19-modeling-toolbox-version-5-updated-11-may-2020
    Explore at:
    Dataset updated
    Apr 3, 2020
    Dataset provided by
    Esrihttp://esri.com/
    Authors
    Esri’s Disaster Response Program
    Description

    Please note, the updated version of this toolbox is now available for download on this page. The COVID-19-Modeling-v1.zip file contains version 5 of the toolbox with updated documentation. Version 5 of the toolbox updates the CHIME Model v1.1.5 tool. The COVID-19Surge (CDC) model is unchanged in this version.More information about the toolbox can be found in the toolbox document. More information about the CHIME Model v1.1.5 tool, including the change log, can be found in the tool documentation and this video.More information about the COVID-19Surge (CDC) tool is included in the tool documentation and this video. CHIME Model v1.1.5 ToolVersion 4 - Updated 11 MAY 2020An implementation of Penn Medicine’s COVID-19 Hospital Impact Model for Epidemics (CHIME) for use in ArcGIS Pro 2.3 or later. This tool leverages SIR (Susceptible, Infected, Recovered) modeling to assist hospitals, cities, and regions with capacity planning around COVID-19 by providing estimates of daily new admissions and current inpatient hospitalizations (census), ICU admissions, and patients requiring ventilation. Version 4 of this tool is based on CHIME v1.1.5 (2020-05-07). Learn more about how CHIME works.Version 4 contains the following updates:Updated the CHIME tool from CHIME v1.1.2 to CHIME v1.1.5.Added a new parameter called Date of Social Distancing Measures Effect to specify the date when social distancing measures started showing their effects.Added a new parameter called Recovery to specify the number of recovered cases at the start of the model.COVID-19Surge (CDC) ToolVersion 1 - Released 04 MAY 2020An implementation of Centers for Disease Control and Prevention’s (CDC) COVID-19Surge for use in ArcGIS Pro 2.3 or later. This tool leverages SIICR (Susceptible, Infected, Infectious, Convalescing, Recovered) modeling to assist hospitals, cities, and regions with capacity planning around COVID-19 by providing estimates of daily new admissions and current inpatient hospitalizations (census), ICU admissions, and patients requiring ventilation based on the extent to which mitigation strategies such as social distancing or shelter-in-place recommendations are implemented. This tool is based on COVID-19Surge. Learn more about how COVID-19Surge works.Potential ApplicationsThe illustration above depicts the outputs of the COVID-19Surge (CDC) tool of the COVID-19 Modeling toolbox.A hospital systems administrator needs a simple model to project the number of patients the hospitals in the network will need to accommodate in the next 90 days due to COVID-19. You know the population served by each hospital, the date and level of current social distancing, the number of people who have recovered, and the number of patients that are currently hospitalized with COVID-19 in each facility. Using your hospital point layer, you run the CHIME Model v1.1.5 tool.An aid agency wants to estimate where and when resources will be required in the counties you serve. You know the population and number of COVID-19 cases today and 14 days ago in each county. You run the COVID-19Surge (CDC) tool using your county polygon data, introducing an Intervention Policy and New Infections Per Case (R0) driven by fields to account for differences in anticipated social distancing policies and effectiveness between counties.A county wants to understand how the lessening or removal of interventions may impact hospital bed availability within the county. You run the CHIME Model v1.1.5 and COVID-19Surge (CDC) tool, checking Add Additional Web App Fields in Summary in both tools. You display the published results from each tool in the Capacity Analysis configurable app so estimates can be compared between models.This toolbox requires any license of ArcGIS Pro 2.3 or higher in order to run. Steps for upgrading ArcGIS Pro can be found here.For questions, comments and support, please visit our COVID-19 GeoNet community.

  8. a

    COVID-19 Cases by Zip Code

    • quality-of-life-tempegov.hub.arcgis.com
    • data-academy.tempe.gov
    • +1more
    Updated Apr 28, 2020
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    City of Tempe (2020). COVID-19 Cases by Zip Code [Dataset]. https://quality-of-life-tempegov.hub.arcgis.com/items/0b70266b299e4229a20aedd0b8470850
    Explore at:
    Dataset updated
    Apr 28, 2020
    Dataset authored and provided by
    City of Tempe
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This item has been archived. It is no longer being updated.For current COVID-19 cases data updates, please see the COVID-19 Cases Per 100,000 by Zip Code dashboard, which shows the COVID-19 case rate per 100,000 population by week for each zip code and is supported by the weekly release of data from the Maricopa County Department of Public Health (MCDPH) https://data.tempe.gov/datasets/covid-19-case-indicators/explore.--------As of 3/2/2022 the Arizona Department of Health Services has shifted to a weekly update schedule. We've adjusted our process to update every Wednesday afternoon.This table provides a weekly log of confirmed COVID-19 cases by Zip Code. Data are provided by the Arizona Department of Health Services (ADHS). Data Source: Arizona Department of Health Services (AZDHS) daily COVID-19 report by zip code (https://adhsgis.maps.arcgis.com/apps/opsdashboard/index.html#/84b7f701060641ca8bd9ea0717790906). Daily Change is calculated by taking the current day’s case value for a given Postal Code and subtracting the prior day’s value. This resulting value is the Daily Change. Based on reporting from ADHS Daily Change may be a positive or negative number or 0 if no change has been reported. Moving Average is calculated by summing the current day’s case count with the prior 6 days’ cases for a given Postal Code and dividing by 7.Arizona Department of Health Services (AZDHS) data are scheduled for daily updates at 9:00 AM (COVID-19 cases) and 12:00 PM (COVID-19 vaccinations), but the times when the AZDHS releases that days COVID-19 cases and vaccinations may vary. City of Tempe data are updated each afternoon at 3:00 PM to allow for possible AZDHS delays. When there are AZDHS delays in updating the daily data, dashboard data updates may be delayed by 24 hours. The charts and daily values list can be used to confirm the date of the most recent counts on the COVID-19 cases and vaccinations dashboards. If data are not released by the time of the scheduled daily dashboard refresh, that day's values may appear on the dashboard as an addition to the next day's value.Additional InformationSource: Arizona Department of Health Services (AZDHS) daily COVID-19 report by zip code (https://adhsgis.maps.arcgis.com/apps/opsdashboard/index.html#/84b7f701060641ca8bd9ea0717790906)Contact (author): n/aContact E-Mail (author): n/aContact (maintainer): City of Tempe Open Data TeamContact E-Mail (maintainer): data@tempe.govData Source Type: TablePreparation Method: Data are exposed via ArcGIS Server and its REST API.Publish Frequency: DailyPublish Method: Data are downloaded each afternoon once ADHS updates its public API. Data are transformed and appended to a table in Tempe’s Enterprise GIS.Data Dictionary

  9. D

    COVID-19 Deaths by Population Characteristics

    • data.sfgov.org
    application/rdfxml +5
    Updated Mar 6, 2025
    + more versions
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    (2025). COVID-19 Deaths by Population Characteristics [Dataset]. https://data.sfgov.org/w/kv9m-37qh/ikek-yizv?cur=Cz9wSjj1-K4&from=root
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    csv, application/rdfxml, xml, application/rssxml, tsv, jsonAvailable download formats
    Dataset updated
    Mar 6, 2025
    Description

    A. SUMMARY This dataset shows San Francisco COVID-19 deaths by population characteristics. This data may not be immediately available for recently reported deaths. Data updates as more information becomes available. Because of this, death totals may increase or decrease.

    Population characteristics are subgroups, or demographic cross-sections, like age, race, or gender. The City tracks how deaths have been distributed among different subgroups. This information can reveal trends and disparities among groups.

    B. HOW THE DATASET IS CREATED As of January 1, 2023, COVID-19 deaths are defined as persons who had COVID-19 listed as a cause of death or a significant condition contributing to their death on their death certificate. This definition is in alignment with the California Department of Public Health and the national https://preparedness.cste.org/wp-content/uploads/2022/12/CSTE-Revised-Classification-of-COVID-19-associated-Deaths.Final_.11.22.22.pdf">Council of State and Territorial Epidemiologists. Death certificates are maintained by the California Department of Public Health.

    Data on the population characteristics of COVID-19 deaths are from: *Case reports *Medical records *Electronic lab reports *Death certificates

    Data are continually updated to maximize completeness of information and reporting on San Francisco COVID-19 deaths.

    To protect resident privacy, we summarize COVID-19 data by only one population characteristic at a time. Data are not shown until cumulative citywide deaths reach five or more.

    Data notes on select population characteristic types are listed below.

    Race/ethnicity * We include all race/ethnicity categories that are collected for COVID-19 cases.

    Gender * The City collects information on gender identity using these guidelines.

    C. UPDATE PROCESS Updates automatically at 06:30 and 07:30 AM Pacific Time on Wednesday each week.

    Dataset will not update on the business day following any federal holiday.

    D. HOW TO USE THIS DATASET Population estimates are only available for age groups and race/ethnicity categories. San Francisco population estimates for race/ethnicity and age groups can be found in a dataset based on the San Francisco Population and Demographic Census dataset.These population estimates are from the 2018-2022 5-year American Community Survey (ACS).

    This dataset includes several characteristic types. Filter the “Characteristic Type” column to explore a topic area. Then, the “Characteristic Group” column shows each group or category within that topic area and the number of cumulative deaths.

    Cumulative deaths are the running total of all San Francisco COVID-19 deaths in that characteristic group up to the date listed.

    To explore data on the total number of deaths, use the COVID-19 Deaths Over Time dataset.

    E. CHANGE LOG

  10. D

    ARCHIVED: COVID-19 Cases and Deaths Summarized by ZIP Code Tabulation Area

    • data.sfgov.org
    Updated Sep 11, 2023
    + more versions
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    Department of Public Health - Population Health Division (2023). ARCHIVED: COVID-19 Cases and Deaths Summarized by ZIP Code Tabulation Area [Dataset]. https://data.sfgov.org/COVID-19/ARCHIVED-COVID-19-Cases-and-Deaths-Summarized-by-Z/tef6-3vsw
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    application/rdfxml, xml, application/rssxml, csv, tsv, kmz, application/geo+json, kmlAvailable download formats
    Dataset updated
    Sep 11, 2023
    Dataset authored and provided by
    Department of Public Health - Population Health Division
    License

    ODC Public Domain Dedication and Licence (PDDL) v1.0http://www.opendatacommons.org/licenses/pddl/1.0/
    License information was derived automatically

    Description

    A. SUMMARY Medical provider confirmed COVID-19 cases and confirmed COVID-19 related deaths in San Francisco, CA aggregated by Census ZIP Code Tabulation Areas and normalized by 2018 American Community Survey (ACS) 5-year estimates for population data to calculate rate per 10,000 residents.

    Cases and deaths are both mapped to the residence of the individual, not to where they were infected or died. For example, if one was infected in San Francisco at work but lives in the East Bay, those are not counted as SF Cases or if one dies in Zuckerberg San Francisco General but is from another county, that is also not counted in this dataset.

    Dataset is cumulative and covers cases going back to March 2nd, 2020 when testing began. It is updated daily.

    B. HOW THE DATASET IS CREATED Addresses from medical data are geocoded by the San Francisco Department of Public Health (SFDPH). Those addresses are spatially joined to the geographic areas. Counts are generated based on the number of address points that match each geographic area. The 2018 ACS estimates for population provided by the Census are used to create a rate which is equal to ([count] / [acs_population]) * 10000) representing the number of cases per 10,000 residents.

    C. UPDATE PROCESS Geographic analysis is scripted by SFDPH staff and synced to this dataset each day.

    D. HOW TO USE THIS DATASET Privacy rules in effect To protect privacy, certain rules are in effect: 1. Case counts greater than 0 and less than 10 are dropped - these will be null (blank) values 2. Cases dropped altogether for areas where acs_population < 1000

    Rate suppression in effect where counts lower than 20 Rates are not calculated unless the case count is greater than or equal to 20. Rates are generally unstable at small numbers, so we avoid calculating them directly. We advise you to apply the same approach as this is best practice in epidemiology.

    A note on Census ZIP Code Tabulation Areas (ZCTAs) ZIP Code Tabulation Areas are special boundaries created by the U.S. Census based on ZIP Codes developed by the USPS. They are not, however, the same thing. ZCTAs are polygonal representations of USPS ZIP Code service area routes. Read how the Census develops ZCTAs on their website.

    This dataset is a filtered view of another dataset You can find a full dataset of cases and deaths summarized by this and other geographic areas.

    E. CHANGE LOG

    • 9/11/2023 - data on COVID-19 cases and deaths summarized by ZIP code tabulation area are no longer being updated. This data is currently through 9/6/2023 and will not include any new data after this date.

  11. Fixed effects design at the department level on the effect of contact...

    • figshare.com
    • plos.figshare.com
    xls
    Updated Jun 12, 2023
    + more versions
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    Andres I. Vecino-Ortiz; Juliana Villanueva Congote; Silvana Zapata Bedoya; Zulma M. Cucunuba (2023). Fixed effects design at the department level on the effect of contact tracing on COVID-19 mortality. [Dataset]. http://doi.org/10.1371/journal.pone.0246987.t004
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    xlsAvailable download formats
    Dataset updated
    Jun 12, 2023
    Dataset provided by
    PLOShttp://plos.org/
    Authors
    Andres I. Vecino-Ortiz; Juliana Villanueva Congote; Silvana Zapata Bedoya; Zulma M. Cucunuba
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Fixed effects design at the department level on the effect of contact tracing on COVID-19 mortality.

  12. f

    Baseline characteristics of AKI cases and controls.

    • figshare.com
    xls
    Updated Jun 12, 2023
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    Ishan Paranjpe; Kumardeep Chaudhary; Kipp W. Johnson; Suraj K. Jaladanki; Shan Zhao; Jessica K. De Freitas; Elisabet Pujdas; Fayzan Chaudhry; Erwin P. Bottinger; Matthew A. Levin; Zahi A. Fayad; Alexander W. Charney; Jane Houldsworth; Carlos Cordon-Cardo; Benjamin S. Glicksberg; Girish N. Nadkarni (2023). Baseline characteristics of AKI cases and controls. [Dataset]. http://doi.org/10.1371/journal.pone.0247366.t001
    Explore at:
    xlsAvailable download formats
    Dataset updated
    Jun 12, 2023
    Dataset provided by
    PLOS ONE
    Authors
    Ishan Paranjpe; Kumardeep Chaudhary; Kipp W. Johnson; Suraj K. Jaladanki; Shan Zhao; Jessica K. De Freitas; Elisabet Pujdas; Fayzan Chaudhry; Erwin P. Bottinger; Matthew A. Levin; Zahi A. Fayad; Alexander W. Charney; Jane Houldsworth; Carlos Cordon-Cardo; Benjamin S. Glicksberg; Girish N. Nadkarni
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Baseline characteristics of AKI cases and controls.

  13. COVID-19 Data Lake

    • registry.opendata.aws
    Updated Apr 20, 2020
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    COVID-19 Data Lake [Dataset]. https://registry.opendata.aws/aws-covid19-lake/
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    Dataset updated
    Apr 20, 2020
    Dataset provided by
    Amazon Web Serviceshttp://aws.amazon.com/
    Amazon Web Serviceshttps://aws.amazon.com/
    Description

    A centralized repository of up-to-date and curated datasets on or related to the spread and characteristics of the novel corona virus (SARS-CoV-2) and its associated illness, COVID-19. Globally, there are several efforts underway to gather this data, and we are working with partners to make this crucial data freely available and keep it up-to-date. Hosted on the AWS cloud, we have seeded our curated data lake with COVID-19 case tracking data from Johns Hopkins and The New York Times, hospital bed availability from Definitive Healthcare, and over 45,000 research articles about COVID-19 and related coronaviruses from the Allen Institute for AI.

  14. H

    Determinants of COVID-19 Mortality in Southeast Asia Region (2020 - 2022)...

    • dataverse.harvard.edu
    Updated Jun 17, 2024
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    Nlandu Roger Ngatu (2024). Determinants of COVID-19 Mortality in Southeast Asia Region (2020 - 2022) "Replication Data" [Dataset]. http://doi.org/10.7910/DVN/FIVJAY
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    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Jun 17, 2024
    Dataset provided by
    Harvard Dataverse
    Authors
    Nlandu Roger Ngatu
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Area covered
    Asia, South East Asia
    Description

    The dataset contains COVID-19 epidemiological data, including cumulative cases and deaths, number of excess deaths associated with COVID-19, log-transformed prevalence of cardiometabolic risk factors and disorders (smoking, hypertension, diabetes), calculated COVID-19 case-fatality rate, as well as country-level sociodemographics. Ten out of 11 countries of the region are included; one country was excluded due to lack of a number of sociodemographic and health statistics.

  15. Preliminary 2024-2025 U.S. COVID-19 Burden Estimates

    • data.cdc.gov
    • data.virginia.gov
    application/rdfxml +5
    Updated Mar 21, 2025
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    Preliminary 2024-2025 U.S. COVID-19 Burden Estimates [Dataset]. https://data.cdc.gov/Public-Health-Surveillance/Preliminary-2024-2025-U-S-COVID-19-Burden-Estimate/ahrf-yqdt
    Explore at:
    csv, application/rdfxml, json, application/rssxml, xml, tsvAvailable download formats
    Dataset updated
    Mar 21, 2025
    Dataset provided by
    National Center for Immunization and Respiratory Diseases
    Authors
    Coronavirus and Other Respiratory Viruses Division (CORVD), National Center for Immunization and Respiratory Diseases (NCIRD).
    License

    https://www.usa.gov/government-workshttps://www.usa.gov/government-works

    Area covered
    United States
    Description

    This dataset represents preliminary estimates of cumulative U.S. COVID-19 disease burden for the 2024-2025 period, including illnesses, outpatient visits, hospitalizations, and deaths. The weekly COVID-19-associated burden estimates are preliminary and based on continuously collected surveillance data from patients hospitalized with laboratory-confirmed severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections. The data come from the Coronavirus Disease 2019 (COVID-19)-Associated Hospitalization Surveillance Network (COVID-NET), a surveillance platform that captures data from hospitals that serve about 10% of the U.S. population. Each week CDC estimates a range (i.e., lower estimate and an upper estimate) of COVID-19 -associated burden that have occurred since October 1, 2024.

    Note: Data are preliminary and subject to change as more data become available. Rates for recent COVID-19-associated hospital admissions are subject to reporting delays; as new data are received each week, previous rates are updated accordingly.

    References

    1. Reed C, Chaves SS, Daily Kirley P, et al. Estimating influenza disease burden from population-based surveillance data in the United States. PLoS One. 2015;10(3):e0118369. https://doi.org/10.1371/journal.pone.0118369 
    2. Rolfes, MA, Foppa, IM, Garg, S, et al. Annual estimates of the burden of seasonal influenza in the United States: A tool for strengthening influenza surveillance and preparedness. Influenza Other Respi Viruses. 2018; 12: 132– 137. https://doi.org/10.1111/irv.12486
    3. Tokars JI, Rolfes MA, Foppa IM, Reed C. An evaluation and update of methods for estimating the number of influenza cases averted by vaccination in the United States. Vaccine. 2018;36(48):7331-7337. doi:10.1016/j.vaccine.2018.10.026 
    4. Collier SA, Deng L, Adam EA, Benedict KM, Beshearse EM, Blackstock AJ, Bruce BB, Derado G, Edens C, Fullerton KE, Gargano JW, Geissler AL, Hall AJ, Havelaar AH, Hill VR, Hoekstra RM, Reddy SC, Scallan E, Stokes EK, Yoder JS, Beach MJ. Estimate of Burden and Direct Healthcare Cost of Infectious Waterborne Disease in the United States. Emerg Infect Dis. 2021 Jan;27(1):140-149. doi: 10.3201/eid2701.190676. PMID: 33350905; PMCID: PMC7774540.
    5. Reed C, Kim IK, Singleton JA,  et al. Estimated influenza illnesses and hospitalizations averted by vaccination–United States, 2013-14 influenza season. MMWR Morb Mortal Wkly Rep. 2014 Dec 12;63(49):1151-4. https://www.cdc.gov/mmwr/preview/mmwrhtml/mm6349a2.htm 
    6. Reed C, Angulo FJ, Swerdlow DL, et al. Estimates of the Prevalence of Pandemic (H1N1) 2009, United States, April–July 2009. Emerg Infect Dis. 2009;15(12):2004-2007. https://dx.doi.org/10.3201/eid1512.091413
    7. Devine O, Pham H, Gunnels B, et al. Extrapolating Sentinel Surveillance Information to Estimate National COVID-19 Hospital Admission Rates: A Bayesian Modeling Approach. Influenza and Other Respiratory Viruses. https://onlinelibrary.wiley.com/doi/10.1111/irv.70026. Volume18, Issue10. October 2024.
    8. https://www.cdc.gov/covid/php/covid-net/index.html">COVID-NET | COVID-19 | CDC 
    9. https://www.cdc.gov/covid/hcp/clinical-care/systematic-review-process.html 
    10. https://academic.oup.com/pnasnexus/article/1/3/pgac079/6604394?login=false">Excess natural-cause deaths in California by cause and setting: March 2020 through February 2021 | PNAS Nexus | Oxford Academic (oup.com)
    11. Kruschke, J. K. 2011. Doing Bayesian data analysis: a tutorial with R and BUGS. Elsevier, Amsterdam, Section 3.3.5.

  16. D

    ARCHIVED: COVID-19 Cases by Geography Over Time

    • data.sfgov.org
    application/rdfxml +5
    Updated Oct 24, 2023
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    Department of Public Health - Population Health Division (2023). ARCHIVED: COVID-19 Cases by Geography Over Time [Dataset]. https://data.sfgov.org/COVID-19/ARCHIVED-COVID-19-Cases-by-Geography-Over-Time/d2ef-idww
    Explore at:
    csv, json, application/rssxml, xml, tsv, application/rdfxmlAvailable download formats
    Dataset updated
    Oct 24, 2023
    Dataset authored and provided by
    Department of Public Health - Population Health Division
    License

    ODC Public Domain Dedication and Licence (PDDL) v1.0http://www.opendatacommons.org/licenses/pddl/1.0/
    License information was derived automatically

    Description

    A. SUMMARY This dataset contains COVID-19 positive confirmed cases aggregated by several different geographic areas and by day. COVID-19 cases are mapped to the residence of the individual and shown on the date the positive test was collected. In addition, 2016-2020 American Community Survey (ACS) population estimates are included to calculate the cumulative rate per 10,000 residents.

    Dataset covers cases going back to 3/2/2020 when testing began. This data may not be immediately available for recently reported cases and data will change to reflect as information becomes available. Data updated daily.

    Geographic areas summarized are: 1. Analysis Neighborhoods 2. Census Tracts 3. Census Zip Code Tabulation Areas

    B. HOW THE DATASET IS CREATED Addresses from the COVID-19 case data are geocoded by the San Francisco Department of Public Health (SFDPH). Those addresses are spatially joined to the geographic areas. Counts are generated based on the number of address points that match each geographic area for a given date.

    The 2016-2020 American Community Survey (ACS) population estimates provided by the Census are used to create a cumulative rate which is equal to ([cumulative count up to that date] / [acs_population]) * 10000) representing the number of total cases per 10,000 residents (as of the specified date).

    COVID-19 case data undergo quality assurance and other data verification processes and are continually updated to maximize completeness and accuracy of information. This means data may change for previous days as information is updated.

    C. UPDATE PROCESS Geographic analysis is scripted by SFDPH staff and synced to this dataset daily at 05:00 Pacific Time.

    D. HOW TO USE THIS DATASET San Francisco population estimates for geographic regions can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS).

    This dataset can be used to track the spread of COVID-19 throughout the city, in a variety of geographic areas. Note that the new cases column in the data represents the number of new cases confirmed in a certain area on the specified day, while the cumulative cases column is the cumulative total of cases in a certain area as of the specified date.

    Privacy rules in effect To protect privacy, certain rules are in effect: 1. Any area with a cumulative case count less than 10 are dropped for all days the cumulative count was less than 10. These will be null values. 2. Once an area has a cumulative case count of 10 or greater, that area will have a new row of case data every day following. 3. Cases are dropped altogether for areas where acs_population < 1000 4. Deaths data are not included in this dataset for privacy reasons. The low COVID-19 death rate in San Francisco, along with other publicly available information on deaths, means that deaths data by geography and day is too granular and potentially risky. Read more in our privacy guidelines

    Rate suppression in effect where counts lower than 20 Rates are not calculated unless the cumulative case count is greater than or equal to 20. Rates are generally unstable at small numbers, so we avoid calculating them directly. We advise you to apply the same approach as this is best practice in epidemiology.

    A note on Census ZIP Code Tabulation Areas (ZCTAs) ZIP Code Tabulation Areas are special boundaries created by the U.S. Census based on ZIP Codes developed by the USPS. They are not, however, the same thing. ZCTAs are areal representations of routes. Read how the Census develops ZCTAs on their website.

    Rows included for Citywide case counts Rows are included for the Citywide case counts and incidence rate every day. These Citywide rows can be used for comparisons. Citywide will capture all cases regardless of address quality. While some cases cannot be mapped to sub-areas like Census Tracts, ongoing data quality efforts result in improved mapping on a rolling bases.

    Related dataset See the dataset of the most recent cumulative counts for all geographic areas here: https://data.sfgov.org/COVID-19/COVID-19-Cases-and-Deaths-Summarized-by-Geography/tpyr-dvnc

    E. CHANGE LOG

    • 9/11/2023 - data on COVID-19 cases by geography over time are no longer being updated. This data is currently through 9/6/2023 and will not include any new data after this date.
    • 4/6/2023 - the State implemented system updates to improve the integrity of historical data.
    • 2/21/2023 - system updates to improve reliability and accuracy of cases data were implemented.
    • 1/31/2023 - updated “acs_population” column to reflect the 2020 Census Bureau American Community Survey (ACS) San Francisco Population estimates.
    • 1/31/2023 - implemented system updates to streamline and improve our geo-coded data, resulting in small shifts in our case data by geography.
    • 1/31/2023 - renamed column “last_updated_at” to “data_as_of”.
    • 1/31/2023 - removed the “multipolygon” column. To access the multipolygon geometry column for each geography unit, refer to COVID-19 Cases and Deaths Summarized by Geography.
    • 1/22/2022 - system updates to improve timeliness and accuracy of cases and deaths data were implemented.
    • 4/16/2021 - dataset updated to refresh with a five-day data lag.

  17. Impacts of COVID-19 on transport choices survey

    • hub.arcgis.com
    • opendata-nzta.opendata.arcgis.com
    Updated Feb 24, 2021
    + more versions
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    Waka Kotahi (2021). Impacts of COVID-19 on transport choices survey [Dataset]. https://hub.arcgis.com/datasets/d682a0a23eae45dcbe8bffcb04b5a64f
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    Dataset updated
    Feb 24, 2021
    Dataset provided by
    NZ Transport Agency Waka Kotahihttp://www.nzta.govt.nz/
    Authors
    Waka Kotahi
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This 20MB download is a zip file containing 1 docx document and 2 xlsx spreadsheets.Waka Kotahi has been running an ongoing study across New Zealand for the effects of COVID-19 on transport choices. The study started on 3 April 2020 and runs for 28 waves, with the final wave scheduled to take place in late 2021. This market research analysis was conducted by Ipsos, with the results data kept in the Harmoni application by Infotools, an external vendor.

    We have created summarised tables from this data, in the form of an Excel spreadsheet, for release as open data. The data records how New Zealanders felt, behaved and travelled under the different COVID-19 alert levels.The data tables from the study, to allow you to do your own analysis. We have already made analysed data from this study available as reports on the Waka Kotahi website.Read 'covid-19 impacts on transport' reportsComplete open dataset: click on the download button for a .zip file containing this item.

    Watch our video about the impacts of COVID-19 on New Zealanders' transport choices

    Data reuse caveats: as per license. Additionally, this data is from research currently being undertaken by Ipsos on behalf of Waka Kotahi NZ Transport Agency. While Waka Kotahi provided investment, the research was undertaken independently, and the resulting findings should not be regarded as being the opinion, responsibility or policy of Waka Kotahi or indeed of any NZ Government agency. We have removed the data for sample sizes of fewer than 60 people, to protect privacy. Data quality statement: high level of confidence.

    Data quality caveats: none known.

    Other metadata: technical report - click on the download button for a .zip file containing this itemquestionnaire changes tracking log - click on the download button for a .zip file containing this item.

  18. t

    COVID-19 Vaccinations by Zip Code

    • data-academy.tempe.gov
    • covid19.tempe.gov
    • +2more
    Updated Mar 3, 2021
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    City of Tempe (2021). COVID-19 Vaccinations by Zip Code [Dataset]. https://data-academy.tempe.gov/datasets/tempegov::covid-19-vaccinations-by-zip-code/about
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    Dataset updated
    Mar 3, 2021
    Dataset authored and provided by
    City of Tempe
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Area covered
    Description

    Updated: As of 7/3/2021 the Arizona Department of Health Services is no longer updated its vaccination data. This item has been deprecated as a result.This table provides a daily log of confirmed COVID-19 vaccinations by Zip Code for the state of Arizona. Data are provided by the Arizona Department of Health Services (ADHS). Data Source: Arizona Department of Health Services (AZDHS) daily COVID-19 vaccinations report by zip code (https://experience.arcgis.com/experience/bcf70a0f5cac4262a411166dbcac9053). Daily Change is calculated by taking the current day’s vaccination value for a given Postal Code and subtracting the prior day’s value. This resulting value is the Daily Change. Based on reporting from ADHS Daily Change may be a positive or negative number or 0 if no change has been reported. Arizona Department of Health Services (AZDHS) data are scheduled for daily updates at 9:00 AM (COVID-19 cases) and 12:00 PM (COVID-19 vaccinations), but the times when the AZDHS releases that days COVID-19 cases and vaccinations may vary. City of Tempe data are updated each afternoon at 3:00 PM to allow for possible AZDHS delays. When there are AZDHS delays in updating the daily data, dashboard data updates may be delayed by 24 hours. The charts and daily values list can be used to confirm the date of the most recent counts on the COVID-19 cases and vaccinations dashboards. If data are not released by the time of the scheduled daily dashboard refresh, that day's values may appear on the dashboard as an addition to the next day's value.---------------------------------------------------Please also see the following items for up-to-date COVID-19 vaccination data:COVID-19 Vaccination Rates by Zip Code (Maricopa County)https://data.tempe.gov/datasets/covid-19-vaccination-rates-by-zip-code-maricopa-county/exploreCOVID-19 Vaccination Rates by City (Maricopa County)https://data.tempe.gov/datasets/covid-19-vaccination-rates-by-city-maricopa-county/explore ---------------------------------------------------Additional InformationSource: Arizona Department of Health Services (AZDHS) daily COVID-19 vaccinations report by zip code (https://experience.arcgis.com/experience/bcf70a0f5cac4262a411166dbcac9053)Contact (author): n/aContact E-Mail (author): n/aContact (maintainer): City of Tempe Open Data TeamContact E-Mail (maintainer): data@tempe.govData Source Type: TablePreparation Method: Data are exposed via ArcGIS Server and its REST API.Publish Frequency: DailyPublish Method: Data are downloaded each afternoon once ADHS updates its public API. Data are transformed and appended to a table in Tempe’s Enterprise GIS.Data Dictionary

  19. d

    Data from: Global-scale modeling of early factors and country-specific...

    • datadryad.org
    • data.niaid.nih.gov
    • +1more
    zip
    Updated Nov 29, 2022
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    Sujoy Ghosh (2022). Global-scale modeling of early factors and country-specific trajectories of COVID-19 incidence: a cross-sectional study of the first 6 months of the pandemic [Dataset]. http://doi.org/10.5061/dryad.612jm6465
    Explore at:
    zipAvailable download formats
    Dataset updated
    Nov 29, 2022
    Dataset provided by
    Dryad
    Authors
    Sujoy Ghosh
    Time period covered
    2022
    Description

    Any software capable of opening Microsoft Excel files will be adequate.

  20. S

    New York State Statewide School COVID-19 Report Card: BOCES Programs,...

    • health.data.ny.gov
    application/rdfxml +5
    Updated Aug 31, 2022
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    New York State Department of Health (2022). New York State Statewide School COVID-19 Report Card: BOCES Programs, 2021-2022 School Year [Dataset]. https://health.data.ny.gov/Health/New-York-State-Statewide-School-COVID-19-Report-Ca/avxx-cpg4
    Explore at:
    csv, xml, json, application/rdfxml, tsv, application/rssxmlAvailable download formats
    Dataset updated
    Aug 31, 2022
    Dataset authored and provided by
    New York State Department of Health
    Area covered
    New York
    Description

    This dataset includes information on school reported COVID-19 testing and case positive data from the 2021-2022 academic year. Data was collected from BOCES programs on each operational day using the daily school survey form, which school administrators access by logging in to the NYSDOH school survey website.

    The primary goal of publishing this dataset is to provide users timely information about disease spread and reporting of positive cases within schools. The data will be updated daily, reflecting data submitted by school administrators the previous day.

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New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://github.com/nytimes/covid-19-data

Coronavirus (Covid-19) Data in the United States

Explore at:
csvAvailable download formats
Dataset provided by
New York Times
License

https://github.com/nytimes/covid-19-data/blob/master/LICENSEhttps://github.com/nytimes/covid-19-data/blob/master/LICENSE

Description

The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

Since the first reported coronavirus case in Washington State on Jan. 21, 2020, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

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