This dataset contains >800K CSV files behind the GitTables 1M corpus.

For more information about the GitTables corpus, visit:

- our website for GitTables, or

- the main GitTables download page on Zenodo.

A csv file containing the tidal frequencies used for statistical analyses in the paper "Estimating Freshwater Flows From Tidally-Affected Hydrographic Data" by Dan Pagendam and Don Percival.

Free, daily updated MAC prefix and vendor CSV database. Download now for accurate device identification.

The Facility Registry System (FRS) identifies facilities, sites, or places subject to environmental regulation or of environmental interest to EPA programs or delegated states. Using vigorous verification and data management procedures, FRS integrates facility data from program national systems, state master facility records, tribal partners, and other federal agencies and provides the Agency with a centrally managed, single source of comprehensive and authoritative information on facilities.

The benchmarking datasets used for deepBlink. The npz files contain train/valid/test splits inside and can be used directly. The files belong to the following challenges / classes:- ISBI Particle tracking challenge: microtubule, vesicle, receptor- Custom synthetic (based on http://smal.ws): particle- Custom fixed cell: smfish- Custom live cell: suntagThe csv files are to determine which image in the test splits correspond to which original image, SNR, and density.

The Facility Registry System (FRS) identifies facilities, sites, or places subject to environmental regulation or of environmental interest to EPA programs or delegated states. Using vigorous verification and data management procedures, FRS integrates facility data from program national systems, state master facility records, tribal partners, and other federal agencies and provides the Agency with a centrally managed, single source of comprehensive and authoritative information on facilities.

Alaska DCCED Division of Corporations, Business and Professional Licensing courtesy CSV Download Link Location

The Facility Registry System (FRS) identifies facilities, sites, or places subject to environmental regulation or of environmental interest to EPA programs or delegated states. Using vigorous verification and data management procedures, FRS integrates facility data from program national systems, state master facility records, tribal partners, and other federal agencies and provides the Agency with a centrally managed, single source of comprehensive and authoritative information on facilities.

This dataset contains the metadata of the datasets published in 101 Dataverse installations, information about the metadata blocks of 106 installations, and the lists of pre-defined licenses or dataset terms that depositors can apply to datasets in the 88 installations that were running versions of the Dataverse software that include the "multiple-license" feature. The data is useful for improving understandings about how certain Dataverse features and metadata fields are used and for learning about the quality of dataset and file-level metadata within and across Dataverse installations. How the metadata was downloaded The dataset metadata and metadata block JSON files were downloaded from each installation between August 25 and August 30, 2024 using a "get_dataverse_installations_metadata" function in a collection of Python functions at https://github.com/jggautier/dataverse-scripts/blob/main/dataverse_repository_curation_assistant/dataverse_repository_curation_assistant_functions.py. In order to get the metadata from installations that require an installation account API token to use certain Dataverse software APIs, I created a CSV file with two columns: one column named "hostname" listing each installation URL for which I was able to create an account and another column named "apikey" listing my accounts' API tokens. The Python script expects the CSV file and the listed API tokens to get metadata and other information from installations that require API tokens in order to use certain API endpoints. How the files are organized ├── csv_files_with_metadata_from_most_known_dataverse_installations │ ├── author_2024.08.25-2024.08.30.csv │ ├── contributor_2024.08.25-2024.08.30.csv │ ├── data_source_2024.08.25-2024.08.30.csv │ ├── ... │ └── topic_classification_2024.08.25-2024.08.30.csv ├── dataverse_json_metadata_from_each_known_dataverse_installation │ ├── Abacus_2024.08.26_15.52.42.zip │ ├── dataset_pids_Abacus_2024.08.26_15.52.42.csv │ ├── Dataverse_JSON_metadata_2024.08.26_15.52.42 │ ├── hdl_11272.1_AB2_0AQZNT_v1.0(latest_version).json │ ├── ... │ ├── metadatablocks_v5.9 │ ├── astrophysics_v5.9.json │ ├── biomedical_v5.9.json │ ├── citation_v5.9.json │ ├── ... │ ├── socialscience_v5.6.json │ ├── ACSS_Dataverse_2024.08.26_00.02.51.zip │ ├── ... │ └── Yale_Dataverse_2024.08.25_03.52.57.zip └── dataverse_installations_summary_2024.08.30.csv └── dataset_pids_from_most_known_dataverse_installations_2024.08.csv └── license_options_for_each_dataverse_installation_2024.08.28_14.42.54.csv └── metadatablocks_from_most_known_dataverse_installations_2024.08.30.csv This dataset contains two directories and four CSV files not in a directory. One directory, "csv_files_with_metadata_from_most_known_dataverse_installations", contains 20 CSV files that list the values of many of the metadata fields in the "Citation" metadata block and "Geospatial" metadata block of datasets in the 101 Dataverse installations. For example, author_2024.08.25-2024.08.30.csv contains the "Author" metadata for the latest versions of all published, non-deaccessioned datasets in 101 installations, with a column for each of the four child fields: author name, affiliation, identifier type, and identifier. The other directory, "dataverse_json_metadata_from_each_known_dataverse_installation", contains 106 zip files, one zip file for each of the 106 Dataverse installations whose sites were functioning when I attempted to collect their metadata. Each zip file contains a directory with JSON files that have information about the installation's metadata fields, such as the field names and how they're organized. For installations that had published datasets, and I was able to use Dataverse APIs to download the dataset metadata, the zip file also contains: A CSV file listing information about the datasets published in the installation, including a column to indicate if the Python script was able to download the Dataverse JSON metadata for each dataset. A directory of JSON files that contain the metadata of the installation's published, non-deaccessioned dataset versions in the Dataverse JSON metadata schema. The dataverse_installations_summary_2024.08.30.csv file contains information about each installation, including its name, URL, Dataverse software version, and counts of dataset metadata included and not included in this dataset. The dataset_pids_from_most_known_dataverse_installations_2024.08.csv file contains the dataset PIDs of published datasets in 101 Dataverse installations, with a column to indicate if the Python script was able to download the dataset's metadata. It's a union of all "dataset_pids_....csv" files in each of the 101 zip files in the dataverse_json_metadata_from_each_known_dataverse_installation directory. The license_options_for_each_dataverse_installation_2024.08.28_14.42.54.csv file contains information about the licenses and...

Raw Data in .csv format for use with the R data wrangling scripts.

Replication pack, FSE2018 submission #164:
------------------------------------------

**Working title:** Ecosystem-Level Factors Affecting the Survival of Open-Source Projects: 
A Case Study of the PyPI Ecosystem

**Note:** link to data artifacts is already included in the paper. 
Link to the code will be included in the Camera Ready version as well.


Content description
===================

- **ghd-0.1.0.zip** - the code archive. This code produces the dataset files 
 described below
- **settings.py** - settings template for the code archive.
- **dataset_minimal_Jan_2018.zip** - the minimally sufficient version of the dataset.
 This dataset only includes stats aggregated by the ecosystem (PyPI)
- **dataset_full_Jan_2018.tgz** - full version of the dataset, including project-level
 statistics. It is ~34Gb unpacked. This dataset still doesn't include PyPI packages
 themselves, which take around 2TB.
- **build_model.r, helpers.r** - R files to process the survival data 
  (`survival_data.csv` in **dataset_minimal_Jan_2018.zip**, 
  `common.cache/survival_data.pypi_2008_2017-12_6.csv` in 
  **dataset_full_Jan_2018.tgz**)
- **Interview protocol.pdf** - approximate protocol used for semistructured interviews.
- LICENSE - text of GPL v3, under which this dataset is published
- INSTALL.md - replication guide (~2 pages)

Replication guide
=================

Step 0 - prerequisites
----------------------

- Unix-compatible OS (Linux or OS X)
- Python interpreter (2.7 was used; Python 3 compatibility is highly likely)
- R 3.4 or higher (3.4.4 was used, 3.2 is known to be incompatible)

Depending on detalization level (see Step 2 for more details):
- up to 2Tb of disk space (see Step 2 detalization levels)
- at least 16Gb of RAM (64 preferable)
- few hours to few month of processing time

Step 1 - software
----------------

- unpack **ghd-0.1.0.zip**, or clone from gitlab:

   git clone https://gitlab.com/user2589/ghd.git
   git checkout 0.1.0
 
 `cd` into the extracted folder. 
 All commands below assume it as a current directory.
  
- copy `settings.py` into the extracted folder. Edit the file:
  * set `DATASET_PATH` to some newly created folder path
  * add at least one GitHub API token to `SCRAPER_GITHUB_API_TOKENS` 
- install docker. For Ubuntu Linux, the command is 
  `sudo apt-get install docker-compose`
- install libarchive and headers: `sudo apt-get install libarchive-dev`
- (optional) to replicate on NPM, install yajl: `sudo apt-get install yajl-tools`
 Without this dependency, you might get an error on the next step, 
 but it's safe to ignore.
- install Python libraries: `pip install --user -r requirements.txt` . 
- disable all APIs except GitHub (Bitbucket and Gitlab support were
 not yet implemented when this study was in progress): edit
 `scraper/init.py`, comment out everything except GitHub support
 in `PROVIDERS`.

Step 2 - obtaining the dataset
-----------------------------

The ultimate goal of this step is to get output of the Python function 
`common.utils.survival_data()` and save it into a CSV file:

  # copy and paste into a Python console
  from common import utils
  survival_data = utils.survival_data('pypi', '2008', smoothing=6)
  survival_data.to_csv('survival_data.csv')

Since full replication will take several months, here are some ways to speedup
the process:

####Option 2.a, difficulty level: easiest

Just use the precomputed data. Step 1 is not necessary under this scenario.

- extract **dataset_minimal_Jan_2018.zip**
- get `survival_data.csv`, go to the next step

####Option 2.b, difficulty level: easy

Use precomputed longitudinal feature values to build the final table.
The whole process will take 15..30 minutes.

- create a folder `

About the MNAD Dataset The MNAD corpus is a collection of over 1 million Moroccan news articles written in modern Arabic language. These news articles have been gathered from 11 prominent electronic news sources. The dataset is made available to the academic community for research purposes, such as data mining (clustering, classification, etc.), information retrieval (ranking, search, etc.), and other non-commercial activities.

Dataset Fields

Title: The title of the article Body: The body of the article Category: The category of the article Source: The Electronic News paper source of the article

About Version 1 of the Dataset (MNAD.v1) Version 1 of the dataset comprises 418,563 articles classified into 19 categories. The data was collected from well-known electronic news sources, namely Akhbarona.ma, Hespress.ma, Hibapress.com, and Le360.com. The articles were stored in four separate CSV files, each corresponding to the news website source. Each CSV file contains three fields: Title, Body, and Category of the news article.

The dataset is rich in Arabic vocabulary, with approximately 906,125 unique words. It has been utilized as a benchmark in the research paper: "A Moroccan News Articles Dataset (MNAD) For Arabic Text Categorization". In 2021 International Conference on Decision Aid Sciences and Application (DASA).

This dataset is available for download from the following sources: - Kaggle Datasets : MNADv1 - Huggingface Datasets: MNADv1

About Version 2 of the Dataset (MNAD.v2) Version 2 of the MNAD dataset includes an additional 653,901 articles, bringing the total number of articles to over 1 million (1,069,489), classified into the same 19 categories as in version 1. The new documents were collected from seven additional prominent Moroccan news websites, namely al3omk.com, medi1news.com, alayam24.com, anfaspress.com, alyaoum24.com, barlamane.com, and SnrtNews.com.

The newly collected articles have been merged with the articles from the previous version into a single CSV file named MNADv2.csv. This file includes an additional column called "Source" to indicate the source of each news article.

Furthermore, MNAD.v2 incorporates improved pre-processing techniques and data cleaning methods. These enhancements involve removing duplicates, eliminating multiple spaces, discarding rows with NaN values, replacing new lines with " ", excluding very long and very short articles, and removing non-Arabic articles. These additions and improvements aim to enhance the usability and value of the MNAD dataset for researchers and practitioners in the field of Arabic text analysis.

This dataset is available for download from the following sources: - Kaggle Datasets : MNADv2 - Huggingface Datasets: MNADv2

Citation If you use our data, please cite the following paper:

bibtex @inproceedings{MNAD2021, author = {Mourad Jbene and Smail Tigani and Rachid Saadane and Abdellah Chehri}, title = {A Moroccan News Articles Dataset ({MNAD}) For Arabic Text Categorization}, year = {2021}, publisher = {{IEEE}}, booktitle = {2021 International Conference on Decision Aid Sciences and Application ({DASA})} doi = {10.1109/dasa53625.2021.9682402}, url = {https://doi.org/10.1109/dasa53625.2021.9682402}, }

A diverse selection of 1000 empirical time series, along with results of an hctsa feature extraction, using v1.06 of hctsa and Matlab 2019b, computed on a server at The University of Sydney.The results of the computation are in the hctsa file, HCTSA_Empirical1000.mat for use in Matlab using v1.06 of hctsa.The same data is also provided in .csv format for the hctsa_datamatrix.csv (results of feature computation), with information about rows (time series) in hctsa_timeseries-info.csv, information about columns (features) in hctsa_features.csv (and corresponding hctsa code used to compute each feature in hctsa_masterfeatures.csv), and the data of individual time series (each line a time series, for time series described in hctsa_timeseries-info.csv) is in hctsa_timeseries-data.csv. These .csv files were produced by running >>OutputToCSV(HCTSA_Empirical1000.mat,true,true); in hctsa.The input file, INP_Empirical1000.mat, is for use with hctsa, and contains the time-series data and metadata for the 1000 time series. For example, massive feature extraction from these data on the user's machine, using hctsa, can proceed as>> TS_Init('INP_Empirical1000.mat');Some visualizations of the dataset are in CarpetPlot.png (first 1000 samples of all time series as a carpet (color) plot) and 150TS-250samples.png (conventional time-series plots of the first 250 samples of a sample of 150 time series from the dataset). More visualizations can be performed by the user using TS_PlotTimeSeries from the hctsa package.See links in references for more comprehensive documentation for performing methodological comparison using this dataset, and on how to download and use v1.06 of hctsa.

The primary goal of the Coral Reef Evaluation and Monitoring Project (CREMP) is to measure the status and trends of these communities to assist managers in understanding, protecting, and restoring the living marine resources of the Florida Keys National Marine Sanctuary. Data from the project will be used to determine (1) overall net increase or decrease in stony coral percent cover and stony coral species richness, (2) overall net change in measurable reef community parameters, (3) changes observed in individual reef communities with no overall change on a landscape scale (decreases in one location balanced by increases elsewhere) or changes that are linked to specific regions of the landscape. Each of these potential mechanisms of change will result in different spatial patterns of change. A Sanctuary-wide, rather than a single-location survey, is necessary to detect ecosystem change.

The Residential School Locations Dataset [IRS_Locations.csv] contains the locations (latitude and longitude) of Residential Schools and student hostels operated by the federal government in Canada. All the residential schools and hostels that are listed in the Indian Residential School Settlement Agreement are included in this dataset, as well as several Industrial schools and residential schools that were not part of the IRRSA. This version of the dataset doesn’t include the five schools under the Newfoundland and Labrador Residential Schools Settlement Agreement. The original school location data was created by the Truth and Reconciliation Commission, and was provided to the researcher (Rosa Orlandini) by the National Centre for Truth and Reconciliation in April 2017. The dataset was created by Rosa Orlandini, and builds upon and enhances the previous work of the Truth and Reconcilation Commission, Morgan Hite (creator of the Atlas of Indian Residential Schools in Canada that was produced for the Tk'emlups First Nation and Justice for Day Scholar's Initiative, and Stephanie Pyne (project lead for the Residential Schools Interactive Map). Each individual school location in this dataset is attributed either to RSIM, Morgan Hite, NCTR or Rosa Orlandini. Many schools/hostels had several locations throughout the history of the institution. If the school/hostel moved from its’ original location to another property, then the school is considered to have two unique locations in this dataset,the original location and the new location. For example, Lejac Indian Residential School had two locations while it was operating, Stuart Lake and Fraser Lake. If a new school building was constructed on the same property as the original school building, it isn't considered to be a new location, as is the case of Girouard Indian Residential School.When the precise location is known, the coordinates of the main building are provided, and when the precise location of the building isn’t known, an approximate location is provided. For each residential school institution location, the following information is provided: official names, alternative name, dates of operation, religious affiliation, latitude and longitude coordinates, community location, Indigenous community name, contributor (of the location coordinates), school/institution photo (when available), location point precision, type of school (hostel or residential school) and list of references used to determine the location of the main buildings or sites.

The Facility Registry System (FRS) identifies facilities, sites, or places subject to environmental regulation or of environmental interest to EPA programs or delegated states. Using vigorous verification and data management procedures, FRS integrates facility data from program national systems, state master facility records, tribal partners, and other federal agencies and provides the Agency with a centrally managed, single source of comprehensive and authoritative information on facilities.

Csv files containing all detectable genes.

The Facility Registry System (FRS) identifies facilities, sites, or places subject to environmental regulation or of environmental interest to EPA programs or delegated states. Using vigorous verification and data management procedures, FRS integrates facility data from program national systems, state master facility records, tribal partners, and other federal agencies and provides the Agency with a centrally managed, single source of comprehensive and authoritative information on facilities.

Programming Languages Infrastructure as Code (PL-IaC) enables IaC programs written in general-purpose programming languages like Python and TypeScript. The currently available PL-IaC solutions are Pulumi and the Cloud Development Kits (CDKs) of Amazon Web Services (AWS) and Terraform. This dataset provides metadata and initial analyses of all public GitHub repositories in August 2022 with an IaC program, including their programming languages, applied testing techniques, and licenses. Further, we provide a shallow copy of the head state of those 7104 repositories whose licenses permit redistribution. The dataset is available under the Open Data Commons Attribution License (ODC-By) v1.0. Contents:

metadata.zip: The dataset metadata and analysis results as CSV files. scripts-and-logs.zip: Scripts and logs of the dataset creation. LICENSE: The Open Data Commons Attribution License (ODC-By) v1.0 text. README.md: This document. redistributable-repositiories.zip: Shallow copies of the head state of all redistributable repositories with an IaC program. This artifact is part of the ProTI Infrastructure as Code testing project: https://proti-iac.github.io. Metadata The dataset's metadata comprises three tabular CSV files containing metadata about all analyzed repositories, IaC programs, and testing source code files. repositories.csv:

ID (integer): GitHub repository ID url (string): GitHub repository URL downloaded (boolean): Whether cloning the repository succeeded name (string): Repository name description (string): Repository description licenses (string, list of strings): Repository licenses redistributable (boolean): Whether the repository's licenses permit redistribution created (string, date & time): Time of the repository's creation updated (string, date & time): Time of the last update to the repository pushed (string, date & time): Time of the last push to the repository fork (boolean): Whether the repository is a fork forks (integer): Number of forks archive (boolean): Whether the repository is archived programs (string, list of strings): Project file path of each IaC program in the repository programs.csv:

ID (string): Project file path of the IaC program repository (integer): GitHub repository ID of the repository containing the IaC program directory (string): Path of the directory containing the IaC program's project file solution (string, enum): PL-IaC solution of the IaC program ("AWS CDK", "CDKTF", "Pulumi") language (string, enum): Programming language of the IaC program (enum values: "csharp", "go", "haskell", "java", "javascript", "python", "typescript", "yaml") name (string): IaC program name description (string): IaC program description runtime (string): Runtime string of the IaC program testing (string, list of enum): Testing techniques of the IaC program (enum values: "awscdk", "awscdk_assert", "awscdk_snapshot", "cdktf", "cdktf_snapshot", "cdktf_tf", "pulumi_crossguard", "pulumi_integration", "pulumi_unit", "pulumi_unit_mocking") tests (string, list of strings): File paths of IaC program's tests testing-files.csv:

file (string): Testing file path language (string, enum): Programming language of the testing file (enum values: "csharp", "go", "java", "javascript", "python", "typescript") techniques (string, list of enum): Testing techniques used in the testing file (enum values: "awscdk", "awscdk_assert", "awscdk_snapshot", "cdktf", "cdktf_snapshot", "cdktf_tf", "pulumi_crossguard", "pulumi_integration", "pulumi_unit", "pulumi_unit_mocking") keywords (string, list of enum): Keywords found in the testing file (enum values: "/go/auto", "/testing/integration", "@AfterAll", "@BeforeAll", "@Test", "@aws-cdk", "@aws-cdk/assert", "@pulumi.runtime.test", "@pulumi/", "@pulumi/policy", "@pulumi/pulumi/automation", "Amazon.CDK", "Amazon.CDK.Assertions", "Assertions_", "HashiCorp.Cdktf", "IMocks", "Moq", "NUnit", "PolicyPack(", "ProgramTest", "Pulumi", "Pulumi.Automation", "PulumiTest", "ResourceValidationArgs", "ResourceValidationPolicy", "SnapshotTest()", "StackValidationPolicy", "Testing", "Testing_ToBeValidTerraform(", "ToBeValidTerraform(", "Verifier.Verify(", "WithMocks(", "[Fact]", "[TestClass]", "[TestFixture]", "[TestMethod]", "[Test]", "afterAll(", "assertions", "automation", "aws-cdk-lib", "aws-cdk-lib/assert", "aws_cdk", "aws_cdk.assertions", "awscdk", "beforeAll(", "cdktf", "com.pulumi", "def test_", "describe(", "github.com/aws/aws-cdk-go/awscdk", "github.com/hashicorp/terraform-cdk-go/cdktf", "github.com/pulumi/pulumi", "integration", "junit", "pulumi", "pulumi.runtime.setMocks(", "pulumi.runtime.set_mocks(", "pulumi_policy", "pytest", "setMocks(", "set_mocks(", "snapshot", "software.amazon.awscdk.assertions", "stretchr", "test(", "testing", "toBeValidTerraform(", "toMatchInlineSnapshot(", "toMatchSnapshot(", "to_be_valid_terraform(", "unittest", "withMocks(") program (string): Project file path of the testing file's IaC program Dataset Creation scripts-and-logs.zip contains all scripts and logs of the creation of this dataset. In it, executions/executions.log documents the commands that generated this dataset in detail. On a high level, the dataset was created as follows:

A list of all repositories with a PL-IaC program configuration file was created using search-repositories.py (documented below). The execution took two weeks due to the non-deterministic nature of GitHub's REST API, causing excessive retries. A shallow copy of the head of all repositories was downloaded using download-repositories.py (documented below). Using analysis.ipynb, the repositories were analyzed for the programs' metadata, including the used programming languages and licenses. Based on the analysis, all repositories with at least one IaC program and a redistributable license were packaged into redistributable-repositiories.zip, excluding any node_modules and .git directories. Searching Repositories The repositories are searched through search-repositories.py and saved in a CSV file. The script takes these arguments in the following order:

Github access token. Name of the CSV output file. Filename to search for. File extensions to search for, separated by commas. Min file size for the search (for all files: 0). Max file size for the search or * for unlimited (for all files: *). Pulumi projects have a Pulumi.yaml or Pulumi.yml (case-sensitive file name) file in their root folder, i.e., (3) is Pulumi and (4) is yml,yaml. https://www.pulumi.com/docs/intro/concepts/project/ AWS CDK projects have a cdk.json (case-sensitive file name) file in their root folder, i.e., (3) is cdk and (4) is json. https://docs.aws.amazon.com/cdk/v2/guide/cli.html CDK for Terraform (CDKTF) projects have a cdktf.json (case-sensitive file name) file in their root folder, i.e., (3) is cdktf and (4) is json. https://www.terraform.io/cdktf/create-and-deploy/project-setup Limitations The script uses the GitHub code search API and inherits its limitations:

Only forks with more stars than the parent repository are included. Only the repositories' default branches are considered. Only files smaller than 384 KB are searchable. Only repositories with fewer than 500,000 files are considered. Only repositories that have had activity or have been returned in search results in the last year are considered. More details: https://docs.github.com/en/search-github/searching-on-github/searching-code The results of the GitHub code search API are not stable. However, the generally more robust GraphQL API does not support searching for files in repositories: https://stackoverflow.com/questions/45382069/search-for-code-in-github-using-graphql-v4-api Downloading Repositories download-repositories.py downloads all repositories in CSV files generated through search-respositories.py and generates an overview CSV file of the downloads. The script takes these arguments in the following order:

Name of the repositories CSV files generated through search-repositories.py, separated by commas. Output directory to download the repositories to. Name of the CSV output file. The script only downloads a shallow recursive copy of the HEAD of the repo, i.e., only the main branch's most recent state, including submodules, without the rest of the git history. Each repository is downloaded to a subfolder named by the repository's ID.