2 datasets found
  1. Alternative outputs based on primary model (packaged datasets) - A landscape...

    • s.cnmilf.com
    • catalog.data.gov
    Updated Feb 22, 2025
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    U.S. Fish and Wildlife Service (2025). Alternative outputs based on primary model (packaged datasets) - A landscape connectivity analysis for the coastal marten (Martes caurina humboldtensis) [Dataset]. https://s.cnmilf.com/user74170196/https/catalog.data.gov/dataset/alternative-outputs-based-on-primary-model-packaged-datasets-a-landscape-connectivity-anal
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    Dataset updated
    Feb 22, 2025
    Dataset provided by
    U.S. Fish and Wildlife Servicehttp://www.fws.gov/
    Description

    This packaged data collection contains two sets of two additional model runs that used the same inputs and parameters as our primary model, with the exception being we implemented a "maximum corridor length" constraint that allowed us to identify and visualize the corridors as being well-connected (≤15km) or moderately connected (≤45km). This is based on an assumption that corridors longer than 45km are too long to sufficiently accommodate dispersal. One of these sets is based on a maximum corridor length that uses Euclidean (straight-line) distance, while the other set is based on a maximum corridor length that uses cost-weighted distance. These two sets of corridors can be compared against the full set of corridors from our primary model to identify the remaining corridors, which could be considered poorly connected. This package includes the following data layers: Corridors classified as well connected (≤15km) based on Cost-weighted Distance Corridors classified as moderately connected (≤45km) based on Cost-weighted Distance Corridors classified as well connected (≤15km) based on Euclidean Distance Corridors classified as moderately connected (≤45km) based on Euclidean Distance Please refer to the embedded metadata and the information in our full report for details on the development of these data layers. Packaged data are available in two formats: Geodatabase (.gdb): A related set of file geodatabase rasters and feature classes, packaged in an ESRI file geodatabase. ArcGIS Pro Map Package (.mpkx): The same data included in the geodatabase, presented as fully-symbolized layers in a map. Note that you must have ArcGIS Pro version 2.0 or greater to view. See Cross-References for links to individual datasets, which can be downloaded in raster GeoTIFF (.tif) format.

  2. n

    Data from: Nine-banded Armadillo (Dasypus novemcinctus) occupancy and...

    • data.niaid.nih.gov
    • search.dataone.org
    • +2more
    zip
    Updated Nov 29, 2023
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    Leah McTigue; Brett DeGregorio (2023). Nine-banded Armadillo (Dasypus novemcinctus) occupancy and density across an urban to rural gradient [Dataset]. http://doi.org/10.5061/dryad.7m0cfxq1r
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    zipAvailable download formats
    Dataset updated
    Nov 29, 2023
    Dataset provided by
    University of Arkansas at Fayetteville
    Michigan State University
    Authors
    Leah McTigue; Brett DeGregorio
    License

    https://spdx.org/licenses/CC0-1.0.htmlhttps://spdx.org/licenses/CC0-1.0.html

    Description

    The nine-banded Armadillo (Dasypus novemcinctus) is the only species of Armadillo in the United States and alters ecosystems by excavating extensive burrows used by many other wildlife species. Relatively little is known about its habitat use or population densities, particularly in developed areas, which may be key to facilitating its range expansion. We evaluated Armadillo occupancy and density in relation to anthropogenic and landcover variables in the Ozark Mountains of Arkansas along an urban to rural gradient. Armadillo detection probability was best predicted by temperature (positively) and precipitation (negatively). Contrary to expectations, occupancy probability of Armadillos was best predicted by slope (negatively) and elevation (positively) rather than any landcover or anthropogenic variables. Armadillo density varied considerably between sites (ranging from a mean of 4.88 – 46.20 Armadillos per km2) but was not associated with any environmental or anthropogenic variables. Methods Site Selection Our study took place in Northwest Arkansas, USA, in the greater Fayetteville metropolitan area. We deployed trail cameras (Spypoint Force Dark (Spypoint Inc, Victoriaville, Quebec, Canada) and Browning Strikeforce XD cameras (Browning, Morgan, Utah, USA) over the course of two winter seasons, December 2020-March 2021, and November 2021-March 2022. We sampled 10 study sites in year one, and 12 study sites in year two. All study sites were located in the Ozark Mountains ecoregion in Northwest Arkansas. Sites were all Oak Hickory dominated hardwood forests at similar elevation (213.6 – 541 m). Devils Eyebrow and ONSC are public natural areas managed by the Arkansas Natural heritage Commission (ANHC). Devil’s Den and Hobbs are managed by the Arkansas state park system. Markham Woods (Markham), Ninestone Land Trust (Ninestone) and Forbes, are all privately owned, though Markham has a publicly accessible trail system throughout the property. Lake Sequoyah, Mt. Sequoyah Woods, Kessler Mountain, Lake Fayetteville, and Millsaps Mountain are all city parks and managed by the city of Fayetteville. Lastly, both Weddington and White Rock are natural areas within Ozark National Forest and managed by the U.S. Forest Service. We sampled 5 sites in both years of the study including Devils Eyebrow, Markham Hill, Sequoyah Woods, Ozark Natural Science Center (ONSC), and Kessler Mountain. We chose our study sites to represent a gradient of human development, based primarily on Anthropogenic noise values (Buxton et al. 2017, Mennitt and Fristrup 2016). We chose open spaces that were large enough to accommodate camera trap research, as well as representing an array of anthropogenic noise values. Since anthropogenic noise is able to permeate into natural areas within the urban interface, introducing human disturbance that may not be detected by other layers such as impervious surface and housing unit density (Buxton et al. 2017), we used dB values for each site as an indicator of the level of urbanization. Camera Placement We sampled ten study sites in the first winter of the study. At each of the 10 study sites, we deployed anywhere between 5 and 15 cameras. Larger study areas received more cameras than smaller sites because all cameras were deployed a minimum of 150m between one another. We avoided placing cameras on roads, trails, and water sources to artificially bias wildlife detections. We also avoided placing cameras within 15m of trails to avoid detecting humans. At each of the 12 study areas we surveyed in the second winter season, we deployed 12 to 30 cameras. At each study site, we used ArcGIS Pro (Esri Inc, Redlands, CA) to delineate the trail systems and then created a 150m buffer on each side of the trail. We then created random points within these buffered areas to decide where to deploy cameras. Each random point had to occur within the buffered areas and be a minimum of 150m from the next nearest camera point, thus the number of cameras at each site varied based upon site size. We placed all cameras within 50m of the random points to ensure that cameras were deployed on safe topography and with a clear field of view, though cameras were not set in locations that would have increased animal detections (game trails, water sources, burrows etc.). Cameras were rotated between sites after 5 or 10 week intervals to allow us to maximize camera locations with a limited number of trail cameras available to us. Sites with more than 25 cameras were active for 5 consecutive weeks while sites with fewer than 25 cameras were active for 10 consecutive weeks. We placed all cameras on trees or tripods 50cm above ground and at least 15m from trails and roads. We set cameras to take a burst of three photos when triggered. We used Timelapse 2.0 software (Greenberg et al. 2019) to extract metadata (date and time) associated with all animal detections. We manually identified all species occurring in photographs and counted the number of individuals present. Because density estimation requires the calculation of detection rates (number of Armadillo detections divided by the total sampling period), we wanted to reduce double counting individuals. Therefore, we grouped photographs of Armadillos into “episodes” of 5 minutes in length to reduce double counting individuals that repeatedly triggered cameras (DeGregorio et al. 2021, Meek et al. 2014). A 5 min threshold is relatively conservative with evidence that even 1-minute episodes adequately reduces double counting (Meek et al. 2014). Landcover Covariates To evaluate occupancy and density of Armadillos based on environmental and anthropogenic variables, we used ArcGIS Pro to extract variables from 500m buffers placed around each camera (Table 2). This spatial scale has been shown to hold biological meaning for Armadillos and similarly sized species (DeGregorio et al. 2021, Fidino et al. 2016, Gallo et al. 2017, Magle et al. 2016). At each camera, we extracted elevation, slope, and aspect from the base ArcGIS Pro map. We extracted maximum housing unit density (HUD) using the SILVIS housing layer (Radeloff et al. 2018, Table 2). We extracted anthropogenic noise from the layer created by Mennitt and Fristrup (2016, Buxton et al. 2017, Table 2) and used the “L50” anthropogenic sound level estimate, which was calculated by taking the difference between predicted environmental noise and the calculated noise level. Therefore, we assume that higher levels of L50 sound corresponded to higher human presence and activity (i.e. voices, vehicles, and other sources of anthropogenic noise; Mennitt and Fristrup 2016). We derived the area of developed open landcover, forest area, and distance to forest edge from the 2019 National Land Cover Database (NLDC, Dewitz 2021, Table 2). Developed open landcover refers to open spaces with less than 20% impervious surface such as residential lawns, cemeteries, golf courses, and parks and has been shown to be important for medium-sized mammals (Gallo et al. 2017, Poessel et al. 2012). Forest area was calculated by combing all forest types within the NLCD layer (deciduous forest, mixed forest, coniferous forest), and summarizing the total area (km2) within the 500m buffer. Distance to forest edge was derived by creating a 30m buffer on each side of all forest boundaries and calculating the distance from each camera to the nearest forest edge. We calculated distance to water by combining the waterbody and flowline features in the National Hydrogeography Dataset (U.S. Geological Survey) for the state of Arkansas to capture both permanent and ephemeral water sources that may be important to wildlife. We measured the distance to water and distance to forest edge using the geoprocessing tool “near” in ArcGIS Pro which calculates the Euclidean distance between a point and the nearest feature. We extracted Average Daily Traffic (ADT) from the Arkansas Department of Transportation database (Arkansas GIS Office). The maximum value for ADT was calculated using the Summarize Within tool in ArcGIS Pro. We tested for correlation between all covariates using a Spearman correlation matrix and removed any variable with correlation greater than 0.6. Pairwise comparisons between distance to roads and HUD and between distance to forest edge and forest area were both correlated above 0.6; therefore, we dropped distance to roads and distance to forest edge from analyses as we predicted that HUD and forest area would have larger biological impacts on our focal species (Kretser et al. 2008). Occupancy Analysis In order to better understand habitat associations while accounting for imperfect detection of Armadillos, we used occupancy modeling (Mackenzie et al. 2002). We used a single-species, single-season occupancy model (Mackenzie et al. 2002) even though we had two years of survey data at 5 of the study sites. We chose to do this rather than using a multi-season dynamic occupancy model because most sites were not sampled during both years of the study. Even for sites that were sampled in both years, cameras were not placed in the same locations each year. We therefore combined all sampling into one single-season model and created unique site by year combinations as our sampling locations and we used year as a covariate for analysis to explore changes in occupancy associated with the year of study. For each sampling location, we created a detection history with 7 day sampling periods, allowing presence/absence data to be recorded at each site for each week of the study. This allowed for 16 survey periods between 01 December 2020, and 11 March 2021 and 22 survey periods between 01 November 2021 and 24 March 2022. We treated each camera as a unique survey site, resulting in a total of 352 sites. Because not all cameras were deployed at the same time and for the same length of time, we used a staggered entry approach. We used a multi-stage fitting approach in which we

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U.S. Fish and Wildlife Service (2025). Alternative outputs based on primary model (packaged datasets) - A landscape connectivity analysis for the coastal marten (Martes caurina humboldtensis) [Dataset]. https://s.cnmilf.com/user74170196/https/catalog.data.gov/dataset/alternative-outputs-based-on-primary-model-packaged-datasets-a-landscape-connectivity-anal
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Alternative outputs based on primary model (packaged datasets) - A landscape connectivity analysis for the coastal marten (Martes caurina humboldtensis)

Explore at:
Dataset updated
Feb 22, 2025
Dataset provided by
U.S. Fish and Wildlife Servicehttp://www.fws.gov/
Description

This packaged data collection contains two sets of two additional model runs that used the same inputs and parameters as our primary model, with the exception being we implemented a "maximum corridor length" constraint that allowed us to identify and visualize the corridors as being well-connected (≤15km) or moderately connected (≤45km). This is based on an assumption that corridors longer than 45km are too long to sufficiently accommodate dispersal. One of these sets is based on a maximum corridor length that uses Euclidean (straight-line) distance, while the other set is based on a maximum corridor length that uses cost-weighted distance. These two sets of corridors can be compared against the full set of corridors from our primary model to identify the remaining corridors, which could be considered poorly connected. This package includes the following data layers: Corridors classified as well connected (≤15km) based on Cost-weighted Distance Corridors classified as moderately connected (≤45km) based on Cost-weighted Distance Corridors classified as well connected (≤15km) based on Euclidean Distance Corridors classified as moderately connected (≤45km) based on Euclidean Distance Please refer to the embedded metadata and the information in our full report for details on the development of these data layers. Packaged data are available in two formats: Geodatabase (.gdb): A related set of file geodatabase rasters and feature classes, packaged in an ESRI file geodatabase. ArcGIS Pro Map Package (.mpkx): The same data included in the geodatabase, presented as fully-symbolized layers in a map. Note that you must have ArcGIS Pro version 2.0 or greater to view. See Cross-References for links to individual datasets, which can be downloaded in raster GeoTIFF (.tif) format.

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