7 datasets found
  1. Supplementary material 6 from: Seltmann K, Lafia S, Paul D, James S, Bloom...

    • zenodo.org
    • data.niaid.nih.gov
    bin
    Updated Jan 21, 2020
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    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg (2020). Supplementary material 6 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449 [Dataset]. http://doi.org/10.3897/rio.4.e32449.suppl6
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    binAvailable download formats
    Dataset updated
    Jan 21, 2020
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    Summary of topics to be covered in an ideal workshop as identified by workshop applicants in the workshop call for participation. We incorporated as many as possible that also fit our scope.

  2. Data from: Estimating animal location from non-overhead camera views

    • zenodo.org
    • search.dataone.org
    • +2more
    bin, html, jpeg, mp4 +3
    Updated Jul 11, 2024
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    Jocelyn M. Woods; Sarah J. J. Adcock; Sarah J. J. Adcock; Jocelyn M. Woods (2024). Estimating animal location from non-overhead camera views [Dataset]. http://doi.org/10.5061/dryad.rr4xgxddm
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    mp4, bin, zip, html, txt, text/x-python, jpegAvailable download formats
    Dataset updated
    Jul 11, 2024
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Jocelyn M. Woods; Sarah J. J. Adcock; Sarah J. J. Adcock; Jocelyn M. Woods
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    Tracking an animal's location from video has many applications, from providing information on health and welfare to validating sensor-based technologies. Typically, accurate location estimation from video is achieved using cameras with overhead (top-down) views, but structural and financial limitations may require mounting cameras at other angles. We describe a user-friendly solution to manually extract an animal's location from non-overhead video. Our method uses QGIS, an open-source geographic information system, to: (1) assign facility-based coordinates to pixel coordinates in non-overhead frames; 2) use the referenced coordinates to transform the non-overhead frames to an overhead view; and 3) determine facility-based x, y coordinates of animals from the transformed frames. Using this method, we could determine an object's facility-based x, y coordinates with an accuracy of 0.13 ± 0.09 m (mean ± SD; range: 0.01–0.47 m) when compared to the ground truth (coordinates manually recorded with a laser tape measurer). We demonstrate how this method can be used to answer research questions about space-use behaviors in captive animals, using 6 ewe-lamb pairs housed in a group pen. As predicted, we found that lambs maintained closer proximity to their dam compared to other ewes in the group and lamb-dam range sizes were strongly correlated. However, the distance traveled by lambs and their dams did not correlate, suggesting that activity levels differed within the pair. This method demonstrates how user-friendly, open-source GIS tools can be used to accurately estimate animal location and derive space-use behaviors from non-overhead video frames. This method will expand capacity to obtain spatial data from animals in facilities where it is not possible to mount cameras overhead.

  3. d

    Georeferencing the \"Atlas du plan général de la ville de Paris par Edme...

    • search.dataone.org
    Updated Nov 8, 2023
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    Perret, Julien (2023). Georeferencing the \"Atlas du plan général de la ville de Paris par Edme Verniquet\" [Dataset]. http://doi.org/10.7910/DVN/ZKRJFA
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    Dataset updated
    Nov 8, 2023
    Dataset provided by
    Harvard Dataverse
    Authors
    Perret, Julien
    Description

    Georeferencing the "Atlas du plan général de la ville de Paris par Edme Verniquet" Géoréférencement de l'Atlas du plan général de la ville de Paris par Edme Verniquet This dataset contains the necessary data control points to georeference the "Atlas du plan général de la ville de Paris par Edme Verniquet" based on 2 different versions of the atlas: one digitized by the Bibliothèque nationale de France (BnF) and the other by The David Rumsey Historical Map Collection. The dataset contains the control points in QGIS format (.points files) and as Allmaps georeference annotations. It also contains the georeferenced map sheets as geotiff.

  4. Supplementary material 3 from: Seltmann K, Lafia S, Paul D, James S, Bloom...

    • zenodo.org
    pdf
    Updated Jul 25, 2024
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    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg (2024). Supplementary material 3 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449 [Dataset]. http://doi.org/10.3897/rio.4.e32449.suppl3
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    pdfAvailable download formats
    Dataset updated
    Jul 25, 2024
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    The informed consent request and workshop survey questions given to participants after the workshop each day for 4 consecutive days.

  5. Z

    Vehicle Trajectory Dataset from Drone-Collected Data at Three Swiss...

    • data.niaid.nih.gov
    Updated Mar 25, 2025
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    Geroliminis, Nikolas (2025). Vehicle Trajectory Dataset from Drone-Collected Data at Three Swiss Roundabouts [Dataset]. https://data.niaid.nih.gov/resources?id=zenodo_15077434
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    Dataset updated
    Mar 25, 2025
    Dataset provided by
    Fonod, Robert
    Barmpounakis, Emmanouil
    Espadaler-Clapés, Jasso
    Geroliminis, Nikolas
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Overview

    This dataset provides high-resolution, georeferenced vehicle trajectories collected via drone footage at three roundabouts located in the municipalities of Frick and Laufenburg, Canton of Aargau, Switzerland. The data were collected as part of a collaborative drone campaign organized by the Urban Transport Systems Laboratory (LUTS), EPFL, within the framework of NCCR Automation, in cooperation with the cantonal traffic planning department of Aargau. The collection took place on Monday, 23rd October 2023, during peak morning and afternoon hours, resulting in nearly 11 hours of 4K video data.

    Dataset Composition

    This dataset contains CSV files structured with consistent data fields representing georeferenced trajectories, vehicle types (car, bus, truck), and timestamps, capturing detailed vehicle movements within roundabout environments.

    File Organization

    File names follow the convention:

    D{X}_{TP}{N}_{S}.csv

    D{X} — the drone identifier, where {X} is a number (e.g., 1, 2) indicating which drone captured the data.→ Example: D1 = data collected by Drone 1.

    {TP}{N} — the time period and session number, where {TP} is either AM (morning) or PM (afternoon), and {N} is an integer indicating the session number.→ Example: AM2 = second morning session.

    {S} — the site identifier, corresponding to one of the monitored sites:→ F1 = Roundabout F1 (Frick)→ F2 = Roundabout F2 (Frick)→ L1 = Roundabout L1 (Laufenburg)

    CSV File Structure

    Each CSV file includes:

    Column Name Description Format / Units

    track_id Unique vehicle identifier (per file) Integer

    type Vehicle type (Car, Bus, Truck) Categorical

    lon WGS84 geographic longitude Decimal degrees (15 d.p.)

    lat WGS84 geographic latitude Decimal degrees (15 d.p.)

    time Local timestamp in ISO 8601 format String (hh:mm:ss.ss)

    Data Collection and Processing

    Collection Method: Two drones flying at an altitude of 120 meters above ground level, capturing videos at 4K resolution (3840×2160 pixels) at 29.97 FPS.

    Locations:

    Roundabout F1 (Frick): Intersection of Bahnhofstrasse and Hauptstrasse 3 (Urban)

    Roundabout F2 (Frick): Intersection of Hauptstrasse 3 with Gänsacker and Stöcklimattstrasse (Urban)

    Roundabout L1 (Laufenburg): Intersection at Hauptstrasse 7 near the German border (Rural)

    Data Processing: The detection, tracking, and trajectory stabilization were performed using the early version of the Geo-trax framework (v0.1.0), an advanced computer vision pipeline tailored for drone-captured traffic footage. The resulting trajectories are precisely represented in stabilized pixel coordinates, which are subsequently transformed into geographic coordinates (WGS84). This georeferencing process follows a procedure similar to that described in Espadaler-Clapés et al., 2023, and includes:

    Identification and extraction of Ground Control Points (GCPs) in the first stabilized video frame using QGIS Georeferencer, linking pixel coordinates to UTM coordinates.

    Linear regression modeling between stabilized pixel coordinates and corresponding UTM coordinates derived from GCPs to estimate transformation parameters.

    Projection to WGS84, converting UTM coordinates into global geographic coordinates using a standard GIS transformation (EPSG:4326).

    Dataset Statistics

    Roundabout Videos Avg. Duration (min) Total Duration (min) Vehicles (total) Cars Buses Trucks

    F1 8 18.63 149.04 4,283 3,967 72 244

    F2 6 19.24 115.44 2,528 2,205 26 297

    L1 4 20.39 81.56 2,130 1,980 24 126

    Potential Applications

    This dataset is well-suited for:

    Gap acceptance behavior studies at roundabouts (e.g., Pascual Anglès et al., 2025)

    Traffic flow analysis and modeling

    Safety assessments using surrogate safety measures (SSMs)

    Validation of traffic simulation models

  6. Supplementary material 7 from: Seltmann K, Lafia S, Paul D, James S, Bloom...

    • zenodo.org
    • data.niaid.nih.gov
    bin
    Updated Jan 21, 2020
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    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg (2020). Supplementary material 7 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449 [Dataset]. http://doi.org/10.3897/rio.4.e32449.suppl7
    Explore at:
    binAvailable download formats
    Dataset updated
    Jan 21, 2020
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    This document contains an annotated set of data quality checks that participants report they use when evaluating and cleaning datasets. These items outline how participants are judging if the data suits their purpose.

  7. Historical topographical maps from 1920 of the vegetable belt of the Three...

    • zenodo.org
    • data.niaid.nih.gov
    bin, tiff
    Updated Jul 7, 2024
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    Claudia Roeoesli; Claudia Roeoesli; Jan Aerni; Simon Amrein; Martin Lanz; Rupf Katja; Specker Martin; Robert Stegemann; Jan Aerni; Simon Amrein; Martin Lanz; Rupf Katja; Specker Martin; Robert Stegemann (2024). Historical topographical maps from 1920 of the vegetable belt of the Three Lakes Region, Grosses Moos, Switzerland [Dataset]. http://doi.org/10.5281/zenodo.10533309
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    tiff, binAvailable download formats
    Dataset updated
    Jul 7, 2024
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Claudia Roeoesli; Claudia Roeoesli; Jan Aerni; Simon Amrein; Martin Lanz; Rupf Katja; Specker Martin; Robert Stegemann; Jan Aerni; Simon Amrein; Martin Lanz; Rupf Katja; Specker Martin; Robert Stegemann
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Time period covered
    Jan 1, 1920
    Area covered
    Switzerland, Grand Marais, Seeland
    Description

    The data sets include 10 scanned historical maps (Plan 1-9 and 11) from 1920 of the region of Grosses Moos in Switzerland. The maps have been drawn by different surveyors with the plane table principle in 1920 represented with a map including topographical information such as contour lines, water bodies and houses and other urban infrastructures. In addition, the original measurement points were marked with a grid of 20-30m spacing and additional points if needed. These individual points were digitized by first georeferencing the individual maps with QGIS and then digitising each single measurement point along with their respective recorded heights. 44319 points were digites in LV03 (Swiss coordinate system) with the corresponding height (stored in the file "HoehendatenPunktwolke_Ins_1920.geojson").

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Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg (2020). Supplementary material 6 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449 [Dataset]. http://doi.org/10.3897/rio.4.e32449.suppl6
Organization logo

Supplementary material 6 from: Seltmann K, Lafia S, Paul D, James S, Bloom D, Rios N, Ellis S, Farrell U, Utrup J, Yost M, Davis E, Emery R, Motz G, Kimmig J, Shirey V, Sandall E, Park D, Tyrrell C, Thackurdeen R, Collins M, O'Leary V, Prestridge H, Evelyn C, Nyberg B (2018) Georeferencing for Research Use (GRU): An integrated geospatial training paradigm for biocollections researchers and data providers. Research Ideas and Outcomes 4: e32449. https://doi.org/10.3897/rio.4.e32449

Explore at:
binAvailable download formats
Dataset updated
Jan 21, 2020
Dataset provided by
Zenodohttp://zenodo.org/
Authors
Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg; Katja Seltmann; Sara Lafia; Deborah Paul; Shelley James; David Bloom; Nelson Rios; Shari Ellis; Una Farrell; Jessica Utrup; Michael Yost; Edward Davis; Rob Emery; Gary Motz; Julien Kimmig; Vaughn Shirey; Emily Sandall; Daniel Park; Christopher Tyrrell; R. Sean Thackurdeen; Matthew Collins; Vincent O'Leary; Heather Prestridge; Christopher Evelyn; Ben Nyberg
License

CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
License information was derived automatically

Description

Summary of topics to be covered in an ideal workshop as identified by workshop applicants in the workshop call for participation. We incorporated as many as possible that also fit our scope.

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