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29 datasets found

  1. Data from: GIAB Benchmarking of HG002 Assemblies from HPRC Year 1 Bakeoff

    • catalog.data.gov
    Updated Jul 29, 2022
  2. A

    Challenging Medically-Relevant Genes Benchmark Set

    • data.amerigeoss.org
    • data.nist.gov
    • +1more
    bin, gz, text, tsv
    Updated Aug 28, 2022

  3. Human genome assemblies enhanced by LOCLA

    • zenodo.org
    zip
    Updated Aug 29, 2023
  4. f

    lra-supplemental-HG002-SV.vcf.tar.gz

    • figshare.com
    application/x-gzip
    Updated Nov 15, 2020

  5. Assembly of human HG002 (GM24385) ONT Q20+ Simplex dataset generated by...

    • zenodo.org
    application/gzip
    Updated Nov 26, 2021
  6. d

    Data for: Nanopore R10.4.1 LSK114 HG002: subset of 20000 reads in BLOW5...

    • search.dataone.org
    Updated Nov 29, 2023
  7. o

    Garvan Institute Long Read Sequencing Benchmark Data

    • registry.opendata.aws
    Updated Jun 16, 2023

  8. The SV callsets of the HG002 human sample produced by cuteSV with multi...

    • zenodo.org
    vcf
    Updated May 3, 2020
  9. f

    HG002 Illumina PCR Free

    • figshare.com
    application/gzip
    Updated Jun 21, 2023
    + more versions

  10. HG002

    • figshare.com
    application/gzip
    Updated Dec 6, 2022

  11. PopDel identifies medium-size deletions jointly in tens of thousands of...

    • zenodo.org
    • explore.openaire.eu
    tar
    Updated Feb 1, 2021
    + more versions

  12. HG002 Ultima (2022)

    • figshare.com
    application/x-gzip
    Updated Apr 5, 2024
  13. g

    Supporting data for "xAtlas: Scalable small variant calling across...

    • gigadb.org
    Updated Nov 14, 2022
  14. f

    HG002 PacBio Hifi

    • figshare.com
    application/gzip
    Updated Jun 21, 2023

  15. Sample graphs and sequences for testing sequence-to-graph alignment

    • zenodo.org
    application/gzip, bin
    Updated Jun 6, 2022
    + more versions

  16. Oxford Nanopore Technologies Benchmark Datasets

    • registry.opendata.aws
    Updated Sep 29, 2020
  17. o

    Open Genomes Telomere-to-Telomere (T2T) Reference Realignment Project

    • omicsdi.org

  18. Sequencing Genome in a Bottle samples

    • zenodo.org
    bin
    Updated Sep 21, 2023
  19. f

    Heuristics used to determine HG002 genotypes.

    • figshare.com
    xls
    Updated May 31, 2023

  20. Minigraph pangenome graphs for HPRC year-1 samples

    • zenodo.org
    application/gzip, bin +1
    Updated Aug 12, 2022
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Tao Jiang; Tao Jiang (2020). The SV callsets of the HG002 human sample produced by cuteSV with multi long-read sequencing platforms. [Dataset]. http://doi.org/10.5281/zenodo.3783083
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The SV callsets of the HG002 human sample produced by cuteSV with multi long-read sequencing platforms.

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vcfAvailable download formats
Unique identifier
https://doi.org/10.5281/zenodo.3783083
Dataset updated
May 3, 2020
Dataset provided by
Zenodohttp://zenodo.org/
Authors
Tao Jiang; Tao Jiang
License

Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically

Description

The SV callsets of the HG002 human sample produced by cuteSV with multi long-read sequencing platforms.

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