Exploring County-Level Correlations in Cancer Rates and Trends

A Multivariate Ordinary Least Squares Regression Model

By Noah Rippner [source]

About this dataset

This dataset offers a unique opportunity to examine the pattern and trends of county-level cancer rates in the United States at the individual county level. Using data from cancer.gov and the US Census American Community Survey, this dataset allows us to gain insight into how age-adjusted death rate, average deaths per year, and recent trends vary between counties – along with other key metrics like average annual counts, met objectives of 45.5?, recent trends (2) in death rates, etc., captured within our deep multi-dimensional dataset. We are able to build linear regression models based on our data to determine correlations between variables that can help us better understand cancers prevalence levels across different counties over time - making it easier to target health initiatives and resources accurately when necessary or desired

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How to use the dataset

This kaggle dataset provides county-level datasets from the US Census American Community Survey and cancer.gov for exploring correlations between county-level cancer rates, trends, and mortality statistics. This dataset contains records from all U.S counties concerning the age-adjusted death rate, average deaths per year, recent trend (2) in death rates, average annual count of cases detected within 5 years, and whether or not an objective of 45.5 (1) was met in the county associated with each row in the table.

To use this dataset to its fullest potential you need to understand how to perform simple descriptive analytics which includes calculating summary statistics such as mean, median or other numerical values; summarizing categorical variables using frequency tables; creating data visualizations such as charts and histograms; applying linear regression or other machine learning techniques such as support vector machines (SVMs), random forests or neural networks etc.; differentiating between supervised vs unsupervised learning techniques etc.; reviewing diagnostics tests to evaluate your models; interpreting your findings; hypothesizing possible reasons and patterns discovered during exploration made through data visualizations ; Communicating and conveying results found via effective presentation slides/documents etc.. Having this understanding will enable you apply different methods of analysis on this data set accurately ad effectively.

Once these concepts are understood you are ready start exploring this data set by first importing it into your visualization software either tableau public/ desktop version/Qlikview / SAS Analytical suite/Python notebooks for building predictive models by loading specified packages based on usage like Scikit Learn if Python is used among others depending on what tool is used . Secondly a brief description of the entire table's column structure has been provided above . Statistical operations can be carried out with simple queries after proper knowledge of basic SQL commands is attained just like queries using sub sets can also be performed with good command over selecting columns while specifying conditions applicable along with sorting operations being done based on specific attributes as required leading up towards writing python codes needed when parsing specific portion of data desired grouping / aggregating different categories before performing any kind of predictions / models can also activated create post joining few tables possible , when ever necessary once again varying across tools being used Thereby diving deep into analyzing available features determined randomly thus creating correlation matrices figures showing distribution relationships using correlation & covariance matrixes , thus making evaluations deducing informative facts since revealing trends identified through corresponding scatter plots from a given metric gathered from appropriate fields!

Research Ideas

• Building a predictive cancer incidence model based on county-level demographic data to identify high-risk areas and target public health interventions.
• Analyzing correlations between age-adjusted death rate, average annual count, and recent trends in order to develop more effective policy initiatives for cancer prevention and healthcare access.
• Utilizing the dataset to construct a machine learning algorithm that can predict county-level mortality rates based on socio-economic factors such as poverty levels and educational attainment rates

Acknowledgements

If you use this dataset i...

The United States Cancer Statistics (USCS) online databases in WONDER provide cancer incidence and mortality data for the United States for the years since 1999, by year, state and metropolitan areas (MSA), age group, race, ethnicity, sex, childhood cancer classifications and cancer site. Report case counts, deaths, crude and age-adjusted incidence and death rates, and 95% confidence intervals for rates. The USCS data are the official federal statistics on cancer incidence from registries having high-quality data and cancer mortality statistics for 50 states and the District of Columbia. USCS are produced by the Centers for Disease Control and Prevention (CDC) and the National Cancer Institute (NCI), in collaboration with the North American Association of Central Cancer Registries (NAACCR). Mortality data are provided by the Centers for Disease Control and Prevention (CDC), National Center for Health Statistics (NCHS), National Vital Statistics System (NVSS).

Cancer Mortality & Incidence Rates: (Country LVL)

Investigating Cancer Trends over time

By Data Exercises [source]

About this dataset

This dataset is a comprehensive collection of data from county-level cancer mortality and incidence rates in the United States between 2000-2014. This data provides an unprecedented level of detail into cancer cases, deaths, and trends at a local level. The included columns include County, FIPS, age-adjusted death rate, average death rate per year, recent trend (2) in death rates, recent 5-year trend (2) in death rates and average annual count for each county. This dataset can be used to provide deep insight into the patterns and effects of cancer on communities as well as help inform policy decisions related to mitigating risk factors or increasing preventive measures such as screenings. With this comprehensive set of records from across the United States over 15 years, you will be able to make informed decisions regarding individual patient care or policy development within your own community!

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How to use the dataset

This dataset provides comprehensive US county-level cancer mortality and incidence rates from 2000 to 2014. It includes the mortality and incidence rate for each county, as well as whether the county met the objective of 45.5 deaths per 100,000 people. It also provides information on recent trends in death rates and average annual counts of cases over the five year period studied.

This dataset can be extremely useful to researchers looking to study trends in cancer death rates across counties. By using this data, researchers will be able to gain valuable insight into how different counties are performing in terms of providing treatment and prevention services for cancer patients and whether preventative measures and healthcare access are having an effect on reducing cancer mortality rates over time. This data can also be used to inform policy makers about counties needing more target prevention efforts or additional resources for providing better healthcare access within at risk communities.

When using this dataset, it is important to pay close attention to any qualitative columns such as “Recent Trend” or “Recent 5-Year Trend (2)” that may provide insights into long term changes that may not be readily apparent when using quantitative variables such as age-adjusted death rate or average deaths per year over shorter periods of time like one year or five years respectively. Additionally, when studying differences between different counties it is important to take note of any standard FIPS code differences that may indicate that data was collected by a different source with a difference methodology than what was used in other areas studied

Research Ideas

• Using this dataset, we can identify patterns in cancer mortality and incidence rates that are statistically significant to create treatment regimens or preventive measures specifically targeting those areas.
• This data can be useful for policymakers to target areas with elevated cancer mortality and incidence rates so they can allocate financial resources to these areas more efficiently.
• This dataset can be used to investigate which factors (such as pollution levels, access to medical care, genetic make up) may have an influence on the cancer mortality and incidence rates in different US counties

Acknowledgements

If you use this dataset in your research, please credit the original authors. Data Source

License

License: Dataset copyright by authors - You are free to: - Share - copy and redistribute the material in any medium or format for any purpose, even commercially. - Adapt - remix, transform, and build upon the material for any purpose, even commercially. - You must: - Give appropriate credit - Provide a link to the license, and indicate if changes were made. - ShareAlike - You must distribute your contributions under the same license as the original. - Keep intact - all notices that refer to this license, including copyright notices.

Columns

File: death .csv | Column name | Description | |:-------------------------------------------|:-------------------------------------------------------------------...

County Cancer Death Rates

County-level cancer death rates with related variables

By Noah Rippner [source]

About this dataset

This dataset provides comprehensive information on county-level cancer death and incidence rates, as well as various related variables. It includes data on age-adjusted death rates, average deaths per year, recent trends in cancer death rates, recent 5-year trends in death rates, and average annual counts of cancer deaths or incidence. The dataset also includes the federal information processing standards (FIPS) codes for each county.

Additionally, the dataset indicates whether each county met the objective of a targeted death rate of 45.5. The recent trend in cancer deaths or incidence is also captured for analysis purposes.

The purpose of the death.csv file within this dataset is to offer detailed information specifically concerning county-level cancer death rates and related variables. On the other hand, the incd.csv file contains data on county-level cancer incidence rates and additional relevant variables.

To provide more context and understanding about the included data points, there is a separate file named cancer_data_notes.csv. This file serves to provide informative notes and explanations regarding the various aspects of the cancer data used in this dataset.

Please note that this particular description provides an overview for a linear regression walkthrough using this dataset based on Python programming language. It highlights how to source and import the data properly before moving into data preparation steps such as exploratory analysis. The walkthrough further covers model selection and important model diagnostics measures.

It's essential to bear in mind that this example serves as an initial attempt at creating a multivariate Ordinary Least Squares regression model using these datasets from various sources like cancer.gov along with US Census American Community Survey data. This baseline model allows easy comparisons with future iterations intended for improvements or refinements.

Important columns found within this extensively documented Kaggle dataset include County names along with their corresponding FIPS codes—a standardized coding system by Federal Information Processing Standards (FIPS). Moreover,Met Objective of 45.5? (1) column denotes whether a specific county achieved the targeted objective of a death rate of 45.5 or not.

Overall, this dataset aims to offer valuable insights into county-level cancer death and incidence rates across various regions, providing policymakers, researchers, and healthcare professionals with essential information for analysis and decision-making purposes

How to use the dataset

• Familiarize Yourself with the Columns:

  • County: The name of the county.
  • FIPS: The Federal Information Processing Standards code for the county.
  • Met Objective of 45.5? (1): Indicates whether the county met the objective of a death rate of 45.5 (Boolean).
  • Age-Adjusted Death Rate: The age-adjusted death rate for cancer in the county.
  • Average Deaths per Year: The average number of deaths per year due to cancer in the county.
  • Recent Trend (2): The recent trend in cancer death rates/incidence in the county.
  • Recent 5-Year Trend (2) in Death Rates: The recent 5-year trend in cancer death rates/incidence in the county.
  • Average Annual Count: The average annual count of cancer deaths/incidence in the county.

• Determine Counties Meeting Objective: Use this dataset to identify counties that have met or not met an objective death rate threshold of 45.5%. Look for entries where Met Objective of 45.5? (1) is marked as True or False.

• Analyze Age-Adjusted Death Rates: Study and compare age-adjusted death rates across different counties using Age-Adjusted Death Rate values provided as floats.

• Explore Average Deaths per Year: Examine and compare average annual counts and trends regarding deaths caused by cancer, using Average Deaths per Year as a reference point.

• Investigate Recent Trends: Assess recent trends related to cancer deaths or incidence by analyzing data under columns such as Recent Trend, Recent Trend (2), and Recent 5-Year Trend (2) in Death Rates. These columns provide information on how cancer death rates/incidence have changed over time.

• Compare Counties: Utilize this dataset to compare counties based on their cancer death rates and related variables. Identify counties with lower or higher average annual counts, age-adjusted death rates, or recent trends to analyze and understand the factors contributing ...

Decrease the cancer death rate from 185.7 per 100,000 in 2013 to 180.3 per 100,000 by 2019.

Cancer death rates by county, all races (includes Hispanic/Latino), all sexes, all ages, 2019-2023. Death data were provided by the National Vital Statistics System. Death rates (deaths per 100,000 population per year) are age-adjusted to the 2000 US standard population (20 age groups: <1, 1-4, 5-9, ... , 80-84, 85-89, 90+). Rates calculated using SEER*Stat. Population counts for denominators are based on Census populations as modified by the National Cancer Institute. The US Population Data File is used for mortality data. The Average Annual Percent Change is based onthe APCs calculated by the Joinpoint Regression Program (Version 4.9.0.0). Due to data availability issues, the time period used in the calculation of the joinpoint regression model may differ for selected counties. Counties with a (3) after their name may have their joinpoint regresssion model calculated using a different time period due to data availability issues.

This dataset contains data about lung cancer Mortality. This database is a comprehensive collection of patient information, specifically focused on individuals diagnosed with cancer. It is designed to facilitate the analysis of various factors that may influence cancer prognosis and treatment outcomes. The database includes a range of demographic, medical, and treatment-related variables, capturing essential details about each patient's condition and history.

Key components of the database include:

Demographic Information: Basic details about the patients such as age, gender, and country of residence. This helps in understanding the distribution of cancer cases across different populations and regions.

Medical History: Information about each patient’s medical background, including family history of cancer, smoking status, Body Mass Index (BMI), cholesterol levels, and the presence of other health conditions such as hypertension, asthma, cirrhosis, and other cancers. This section is crucial for identifying potential risk factors and comorbidities.

Cancer Diagnosis: Detailed data about the cancer diagnosis itself, including the date of diagnosis and the stage of cancer at the time of diagnosis. This helps in tracking the progression and severity of the disease.

Treatment Details: Information regarding the type of treatment each patient received, the end date of the treatment, and the outcome (whether the patient survived or not). This is essential for evaluating the effectiveness of different treatment approaches.

The structure of the database allows for in-depth analysis and research, making it possible to identify patterns, correlations, and potential causal relationships between various factors and cancer outcomes. It is a valuable resource for medical researchers, epidemiologists, and healthcare providers aiming to improve cancer treatment and patient care.

id: A unique identifier for each patient in the dataset. age: The age of the patient at the time of diagnosis. gender: The gender of the patient (e.g., male, female). country: The country or region where the patient resides. diagnosis_date: The date on which the patient was diagnosed with lung cancer. cancer_stage: The stage of lung cancer at the time of diagnosis (e.g., Stage I, Stage II, Stage III, Stage IV). family_history: Indicates whether there is a family history of cancer (e.g., yes, no). smoking_status: The smoking status of the patient (e.g., current smoker, former smoker, never smoked, passive smoker). bmi: The Body Mass Index of the patient at the time of diagnosis. cholesterol_level: The cholesterol level of the patient (value). hypertension: Indicates whether the patient has hypertension (high blood pressure) (e.g., yes, no). asthma: Indicates whether the patient has asthma (e.g., yes, no). cirrhosis: Indicates whether the patient has cirrhosis of the liver (e.g., yes, no). other_cancer: Indicates whether the patient has had any other type of cancer in addition to the primary diagnosis (e.g., yes, no). treatment_type: The type of treatment the patient received (e.g., surgery, chemotherapy, radiation, combined). end_treatment_date: The date on which the patient completed their cancer treatment or died. survived: Indicates whether the patient survived (e.g., yes, no).

This dataset contains artificially generated data with as close a representation of reality as possible. This data is free to use without any licence required.

Good luck Gakusei!

This data shows premature deaths (Age under 75) from all Cancers, numbers and rates by gender, as 3-year moving-averages. Cancers are a major cause of premature deaths. Inequalities exist in cancer rates between the most deprived areas and the most affluent areas. Directly Age-Standardised Rates (DASR) are shown in the data (where numbers are sufficient) so that death rates can be directly compared between areas. The DASR calculation applies Age-specific rates to a Standard (European) population to cancel out possible effects on crude rates due to different age structures among populations, thus enabling direct comparisons of rates. A limitation on using mortalities as a proxy for prevalence of health conditions is that mortalities may give an incomplete view of health conditions in an area, as ill-health might not lead to premature death. Data source: Office for Health Improvement and Disparities (OHID), indicator ID 40501, E05a. This data is updated annually.

Cancer diagnoses and age-standardised incidence rates for all types of cancer by age and sex including breast, prostate, lung and colorectal cancer.

Number and rate of new cancer cases diagnosed annually from 1992 to the most recent diagnosis year available. Included are all invasive cancers and in situ bladder cancer with cases defined using the Surveillance, Epidemiology and End Results (SEER) Groups for Primary Site based on the World Health Organization International Classification of Diseases for Oncology, Third Edition (ICD-O-3). Random rounding of case counts to the nearest multiple of 5 is used to prevent inappropriate disclosure of health-related information.

This data shows premature deaths (Age under 75) from all Cancers, numbers and rates by gender, as 3-year moving-averages. Cancers are a major cause of premature deaths. Inequalities exist in cancer rates between the most deprived areas and the most affluent areas. Directly Age-Standardised Rates (DASR) are shown in the data (where numbers are sufficient) so that death rates can be directly compared between areas. The DASR calculation applies Age-specific rates to a Standard (European) population to cancel out possible effects on crude rates due to different age structures among populations, thus enabling direct comparisons of rates. A limitation on using mortalities as a proxy for prevalence of health conditions is that mortalities may give an incomplete view of health conditions in an area, as ill-health might not lead to premature death. Data source: Office for Health Improvement and Disparities (OHID), indicator ID 40501, E05a. This data is updated annually.

This dataset presents the mortality rate from cancer among individuals under the age of 75 within the Birmingham and Solihull area. It captures the number of deaths attributed to all cancers (classified under ICD-10 codes C00 to C97) and expresses this as a directly age-standardised rate per 100,000 population. The data is structured in quinary age bands and is available for both single-year and three-year rolling averages, providing a comprehensive view of premature cancer mortality trends in the region.

Rationale Reducing premature mortality from cancer is a key public health priority. This indicator helps track progress in lowering the number of cancer-related deaths among people under 75, supporting efforts to improve early diagnosis, treatment, and prevention strategies.

Numerator The numerator is the number of deaths from all cancers (ICD-10 codes C00 to C97) registered in the respective calendar years, for individuals aged under 75. These figures are aggregated into quinary age bands and sourced from the Death Register.

Denominator The denominator is the population of individuals under 75 years of age, also aggregated into quinary age bands. For single-year rates, the population for that year is used. For three-year rolling averages, the population-years are aggregated across the three years. The source of this data is the 2021 Census.

Caveats Data may not align exactly with published Office for National Statistics (ONS) figures due to differences in postcode lookup versions and the application of comparability ratios in Office for Health Improvement and Disparities (OHID) data. Users should be cautious when comparing this dataset with other national statistics.

External references Further information and related indicators can be found on the OHID Fingertips platform.

Localities ExplainedThis dataset contains data based on either the resident locality or registered locality of the patient, a distinction is made between resident locality and registered locality populations:Resident Locality refers to individuals who live within the defined geographic boundaries of the locality. These boundaries are aligned with official administrative areas such as wards and Lower Layer Super Output Areas (LSOAs).Registered Locality refers to individuals who are registered with GP practices that are assigned to a locality based on the Primary Care Network (PCN) they belong to. These assignments are approximate—PCNs are mapped to a locality based on the location of most of their GP surgeries. As a result, locality-registered patients may live outside the locality, sometimes even in different towns or cities.This distinction is important because some health indicators are only available at GP practice level, without information on where patients actually reside. In such cases, data is attributed to the locality based on GP registration, not residential address.

Click here to explore more from the Birmingham and Solihull Integrated Care Partnerships Outcome Framework.

In the following maps, the U.S. states are divided into groups based on the rates at which people developed or died from cancer in 2013, the most recent year for which incidence data are available.

The rates are the numbers out of 100,000 people who developed or died from cancer each year.

Incidence Rates by State The number of people who get cancer is called cancer incidence. In the United States, the rate of getting cancer varies from state to state.

*Rates are per 100,000 and are age-adjusted to the 2000 U.S. standard population.

‡Rates are not shown if the state did not meet USCS publication criteria or if the state did not submit data to CDC.

†Source: U.S. Cancer Statistics Working Group. United States Cancer Statistics: 1999–2013 Incidence and Mortality Web-based Report. Atlanta (GA): Department of Health and Human Services, Centers for Disease Control and Prevention, and National Cancer Institute; 2016. Available at: http://www.cdc.gov/uscs.

Death Rates by State Rates of dying from cancer also vary from state to state.

*Rates are per 100,000 and are age-adjusted to the 2000 U.S. standard population.

†Source: U.S. Cancer Statistics Working Group. United States Cancer Statistics: 1999–2013 Incidence and Mortality Web-based Report. Atlanta (GA): Department of Health and Human Services, Centers for Disease Control and Prevention, and National Cancer Institute; 2016. Available at: http://www.cdc.gov/uscs.

Source: https://www.cdc.gov/cancer/dcpc/data/state.htm

Mortality Rates for Lake County, Illinois. Explanation of field attributes: Average Age of Death – The average age at which a people in the given zip code die. Cancer Deaths – Cancer deaths refers to individuals who have died of cancer as the underlying cause. This is a rate per 100,000. Heart Disease Related Deaths – Heart Disease Related Deaths refers to individuals who have died of heart disease as the underlying cause. This is a rate per 100,000. COPD Related Deaths – COPD Related Deaths refers to individuals who have died of chronic obstructive pulmonary disease (COPD) as the underlying cause. This is a rate per 100,000.

Users can access data about cancer statistics in the United States including but not limited to searches by type of cancer and race, sex, ethnicity, age at diagnosis, and age at death. Background Surveillance Epidemiology and End Results (SEER) database’s mission is to provide information on cancer statistics to help reduce the burden of disease in the U.S. population. The SEER database is a project to the National Cancer Institute. The SEER database collects information on incidence, prevalence, and survival from specific geographic areas representing 28 percent of the United States population. User functionality Users can access a variety of reso urces. Cancer Stat Fact Sheets allow users to look at summaries of statistics by major cancer type. Cancer Statistic Reviews are available from 1975-2008 in table format. Users are also able to build their own tables and graphs using Fast Stats. The Cancer Query system provides more flexibility and a larger set of cancer statistics than F ast Stats but requires more input from the user. State Cancer Profiles include dynamic maps and graphs enabling the investigation of cancer trends at the county, state, and national levels. SEER research data files and SEER*Stat software are available to download through your Internet connection (SEER*Stat’s client-server mode) or via discs shipped directly to you. A signed data agreement form is required to access the SEER data Data Notes Data is available in different formats depending on which type of data is accessed. Some data is available in table, PDF, and html formats. Detailed information about the data is available under “Data Documentation and Variable Recodes”.

The interannual variability of SMR for a given administrative unit might be large under small populations. Indeed, being the SMR a rate standardized over the population size, the expected mortality (i.e., Em) in small populations will result low (say 10-2) and in turn, according to eq. (1), even a few deaths (say 1 or 2) in a year could yield a relatively high SMR as shown in Figure 3. For this reason, we recommend avoiding using single-year estimates and using the average SMR and/or lower 90% or 95% confidence intervals.

Commentary, charts and tables present information on cancer cases and deaths in the UK. This publication has been discontinued as a result of the ONS Consultation on Statistical Products 2013. The last edition published was in December 2012. Source agency: Office for National Statistics Designation: National Statistics Language: English Alternative title: Cancer incidence and mortality

Lung Cancer Deaths reports the number, crude rate, and age-adjusted mortality rate (AAMR) of deaths due to lung cancer. Dimensions Year;Measure Type;Variable Full Description Lung cancer forms in tissues of the lung, usually in the cells lining air passages. Deaths with ICD-10 code C34 as the underlying cause of death are recorded as lung cancer deaths. Data are reported annually.

Medical Service Study Areas (MSSAs)As defined by California's Office of Statewide Health Planning and Development (OSHPD) in 2013, "MSSAs are sub-city and sub-county geographical units used to organize and display population, demographic and physician data" (Source). Each census tract in CA is assigned to a given MSSA. The most recent MSSA dataset (2014) was used. Spatial data are available via OSHPD at the California Open Data Portal. This information may be useful in studying health equity.Age-Adjusted Incidence Rate (AAIR)Age-adjustment is a statistical method that allows comparisons of incidence rates to be made between populations with different age distributions. This is important since the incidence of most cancers increases with age. An age-adjusted cancer incidence (or death) rate is defined as the number of new cancers (or deaths) per 100,000 population that would occur in a certain period of time if that population had a 'standard' age distribution. In the California Health Maps, incidence rates are age-adjusted using the U.S. 2000 Standard Population.Cancer incidence ratesIncidence rates were calculated using case counts from the California Cancer Registry. Population data from 2010 Census and SEER 2015 census tract estimates by race/origin (controlling to Vintage 2015) were used to estimate population denominators. Yearly SEER 2015 census tract estimates by race/origin (controlling to Vintage 2015) were used to estimate population denominators for 5-year incidence rates (2013-2017)According to California Department of Public Health guidelines, cancer incidence rates cannot be reported if based on <15 cancer cases and/or a population <10,000 to ensure confidentiality and stable statistical rates.Spatial extent: CaliforniaSpatial Unit: MSSACreated: n/aUpdated: n/aSource: California Health MapsContact Email: gbacr@ucsf.eduSource Link: https://www.californiahealthmaps.org/?areatype=mssa&address=&sex=Both&site=AllSite&race=&year=05yr&overlays=none&choropleth=Obesity

Number of Cancer New Cases and Registered Deaths by Ten Leading Cancer Disease Group by Sex 2022