100+ datasets found
  1. n

    Coronavirus (Covid-19) Data in the United States

    • nytimes.com
    • openicpsr.org
    • +2more
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    New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://www.nytimes.com/interactive/2020/us/coronavirus-us-cases.html
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    Dataset provided by
    New York Times
    Description

    The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

    Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

    We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

    The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

  2. N

    Monthly Average of Cases

    • data.cityofnewyork.us
    application/rdfxml +5
    Updated Sep 28, 2025
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    Department of Health and Mental Hygiene (DOHMH) (2025). Monthly Average of Cases [Dataset]. https://data.cityofnewyork.us/Health/Monthly-Average-of-Cases/c9vu-5u38
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    json, application/rssxml, xml, csv, application/rdfxml, tsvAvailable download formats
    Dataset updated
    Sep 28, 2025
    Authors
    Department of Health and Mental Hygiene (DOHMH)
    Description

    Daily count of NYC residents who tested positive for SARS-CoV-2, who were hospitalized with COVID-19, and deaths among COVID-19 patients.

    Note that this dataset currently pulls from https://raw.githubusercontent.com/nychealth/coronavirus-data/master/case-hosp-death.csv on a daily basis.

  3. COVID-19 Case Surveillance Public Use Data

    • odgavaprod.ogopendata.com
    • catalog.midasnetwork.us
    • +5more
    csv, json, rdf, xsl
    Updated Feb 23, 2025
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    Centers for Disease Control and Prevention (2025). COVID-19 Case Surveillance Public Use Data [Dataset]. https://odgavaprod.ogopendata.com/dataset/covid-19-case-surveillance-public-use-data
    Explore at:
    rdf, json, csv, xslAvailable download formats
    Dataset updated
    Feb 23, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Description

    Note: Reporting of new COVID-19 Case Surveillance data will be discontinued July 1, 2024, to align with the process of removing SARS-CoV-2 infections (COVID-19 cases) from the list of nationally notifiable diseases. Although these data will continue to be publicly available, the dataset will no longer be updated.

    Authorizations to collect certain public health data expired at the end of the U.S. public health emergency declaration on May 11, 2023. The following jurisdictions discontinued COVID-19 case notifications to CDC: Iowa (11/8/21), Kansas (5/12/23), Kentucky (1/1/24), Louisiana (10/31/23), New Hampshire (5/23/23), and Oklahoma (5/2/23). Please note that these jurisdictions will not routinely send new case data after the dates indicated. As of 7/13/23, case notifications from Oregon will only include pediatric cases resulting in death.

    This case surveillance public use dataset has 12 elements for all COVID-19 cases shared with CDC and includes demographics, any exposure history, disease severity indicators and outcomes, presence of any underlying medical conditions and risk behaviors, and no geographic data.

    CDC has three COVID-19 case surveillance datasets:

    The following apply to all three datasets:

    Overview

    The COVID-19 case surveillance database includes individual-level data reported to U.S. states and aut

  4. weekly-united-states-covid-19-cases-and-deaths-by

    • huggingface.co
    Updated Feb 23, 2025
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    Department of Health and Human Services (2025). weekly-united-states-covid-19-cases-and-deaths-by [Dataset]. https://huggingface.co/datasets/HHS-Official/weekly-united-states-covid-19-cases-and-deaths-by
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    Dataset updated
    Feb 23, 2025
    Dataset provided by
    United States Department of Health and Human Serviceshttp://www.hhs.gov/
    Authors
    Department of Health and Human Services
    Area covered
    United States
    Description

    Weekly United States COVID-19 Cases and Deaths by State - ARCHIVED

      Description
    

    Reporting of new Aggregate Case and Death Count data was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. This dataset will receive a final update on June 1, 2023, to reconcile historical data through May 10, 2023, and will remain publicly available. Aggregate Data Collection Process Since the start of the COVID-19 pandemic, data have been… See the full description on the dataset page: https://huggingface.co/datasets/HHS-Official/weekly-united-states-covid-19-cases-and-deaths-by.

  5. United States COVID-19 Community Levels by County

    • odgavaprod.ogopendata.com
    • healthdata.gov
    • +1more
    csv, json, rdf, xsl
    Updated Feb 23, 2025
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    Centers for Disease Control and Prevention (2025). United States COVID-19 Community Levels by County [Dataset]. https://odgavaprod.ogopendata.com/dataset/united-states-covid-19-community-levels-by-county
    Explore at:
    json, rdf, csv, xslAvailable download formats
    Dataset updated
    Feb 23, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Area covered
    United States
    Description

    Reporting of Aggregate Case and Death Count data was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. Although these data will continue to be publicly available, this dataset will no longer be updated.

    This archived public use dataset has 11 data elements reflecting United States COVID-19 community levels for all available counties.

    The COVID-19 community levels were developed using a combination of three metrics — new COVID-19 admissions per 100,000 population in the past 7 days, the percent of staffed inpatient beds occupied by COVID-19 patients, and total new COVID-19 cases per 100,000 population in the past 7 days. The COVID-19 community level was determined by the higher of the new admissions and inpatient beds metrics, based on the current level of new cases per 100,000 population in the past 7 days. New COVID-19 admissions and the percent of staffed inpatient beds occupied represent the current potential for strain on the health system. Data on new cases acts as an early warning indicator of potential increases in health system strain in the event of a COVID-19 surge.

    Using these data, the COVID-19 community level was classified as low, medium, or high.

    COVID-19 Community Levels were used to help communities and individuals make decisions based on their local context and their unique needs. Community vaccination coverage and other local information, like early alerts from surveillance, such as through wastewater or the number of emergency department visits for COVID-19, when available, can also inform decision making for health officials and individuals.

    For the most accurate and up-to-date data for any county or state, visit the relevant health department website. COVID Data Tracker may display data that differ from state and local websites. This can be due to differences in how data were collected, how metrics were calculated, or the timing of web updates.

    Archived Data Notes:

    This dataset was renamed from "United States COVID-19 Community Levels by County as Originally Posted" to "United States COVID-19 Community Levels by County" on March 31, 2022.

    March 31, 2022: Column name for county population was changed to “county_population”. No change was made to the data points previous released.

    March 31, 2022: New column, “health_service_area_population”, was added to the dataset to denote the total population in the designated Health Service Area based on 2019 Census estimate.

    March 31, 2022: FIPS codes for territories American Samoa, Guam, Commonwealth of the Northern Mariana Islands, and United States Virgin Islands were re-formatted to 5-digit numeric for records released on 3/3/2022 to be consistent with other records in the dataset.

    March 31, 2022: Changes were made to the text fields in variables “county”, “state”, and “health_service_area” so the formats are consistent across releases.

    March 31, 2022: The “%” sign was removed from the text field in column “covid_inpatient_bed_utilization”. No change was made to the data. As indicated in the column description, values in this column represent the percentage of staffed inpatient beds occupied by COVID-19 patients (7-day average).

    March 31, 2022: Data values for columns, “county_population”, “health_service_area_number”, and “health_service_area” were backfilled for records released on 2/24/2022. These columns were added since the week of 3/3/2022, thus the values were previously missing for records released the week prior.

    April 7, 2022: Updates made to data released on 3/24/2022 for Guam, Commonwealth of the Northern Mariana Islands, and United States Virgin Islands to correct a data mapping error.

    April 21, 2022: COVID-19 Community Level (CCL) data released for counties in Nebraska for the week of April 21, 2022 have 3 counties identified in the high category and 37 in the medium category. CDC has been working with state officials t

  6. d

    Johns Hopkins COVID-19 Case Tracker

    • data.world
    csv, zip
    Updated Oct 3, 2025
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    The Associated Press (2025). Johns Hopkins COVID-19 Case Tracker [Dataset]. https://data.world/associatedpress/johns-hopkins-coronavirus-case-tracker
    Explore at:
    zip, csvAvailable download formats
    Dataset updated
    Oct 3, 2025
    Authors
    The Associated Press
    Time period covered
    Jan 22, 2020 - Mar 9, 2023
    Area covered
    Description

    Updates

    • Notice of data discontinuation: Since the start of the pandemic, AP has reported case and death counts from data provided by Johns Hopkins University. Johns Hopkins University has announced that they will stop their daily data collection efforts after March 10. As Johns Hopkins stops providing data, the AP will also stop collecting daily numbers for COVID cases and deaths. The HHS and CDC now collect and visualize key metrics for the pandemic. AP advises using those resources when reporting on the pandemic going forward.

    • April 9, 2020

      • The population estimate data for New York County, NY has been updated to include all five New York City counties (Kings County, Queens County, Bronx County, Richmond County and New York County). This has been done to match the Johns Hopkins COVID-19 data, which aggregates counts for the five New York City counties to New York County.
    • April 20, 2020

      • Johns Hopkins death totals in the US now include confirmed and probable deaths in accordance with CDC guidelines as of April 14. One significant result of this change was an increase of more than 3,700 deaths in the New York City count. This change will likely result in increases for death counts elsewhere as well. The AP does not alter the Johns Hopkins source data, so probable deaths are included in this dataset as well.
    • April 29, 2020

      • The AP is now providing timeseries data for counts of COVID-19 cases and deaths. The raw counts are provided here unaltered, along with a population column with Census ACS-5 estimates and calculated daily case and death rates per 100,000 people. Please read the updated caveats section for more information.
    • September 1st, 2020

      • Johns Hopkins is now providing counts for the five New York City counties individually.
    • February 12, 2021

      • The Ohio Department of Health recently announced that as many as 4,000 COVID-19 deaths may have been underreported through the state’s reporting system, and that the "daily reported death counts will be high for a two to three-day period."
      • Because deaths data will be anomalous for consecutive days, we have chosen to freeze Ohio's rolling average for daily deaths at the last valid measure until Johns Hopkins is able to back-distribute the data. The raw daily death counts, as reported by Johns Hopkins and including the backlogged death data, will still be present in the new_deaths column.
    • February 16, 2021

      - Johns Hopkins has reconciled Ohio's historical deaths data with the state.

      Overview

    The AP is using data collected by the Johns Hopkins University Center for Systems Science and Engineering as our source for outbreak caseloads and death counts for the United States and globally.

    The Hopkins data is available at the county level in the United States. The AP has paired this data with population figures and county rural/urban designations, and has calculated caseload and death rates per 100,000 people. Be aware that caseloads may reflect the availability of tests -- and the ability to turn around test results quickly -- rather than actual disease spread or true infection rates.

    This data is from the Hopkins dashboard that is updated regularly throughout the day. Like all organizations dealing with data, Hopkins is constantly refining and cleaning up their feed, so there may be brief moments where data does not appear correctly. At this link, you’ll find the Hopkins daily data reports, and a clean version of their feed.

    The AP is updating this dataset hourly at 45 minutes past the hour.

    To learn more about AP's data journalism capabilities for publishers, corporations and financial institutions, go here or email kromano@ap.org.

    Queries

    Use AP's queries to filter the data or to join to other datasets we've made available to help cover the coronavirus pandemic

    Interactive

    The AP has designed an interactive map to track COVID-19 cases reported by Johns Hopkins.

    @(https://datawrapper.dwcdn.net/nRyaf/15/)

    Interactive Embed Code

    <iframe title="USA counties (2018) choropleth map Mapping COVID-19 cases by county" aria-describedby="" id="datawrapper-chart-nRyaf" src="https://datawrapper.dwcdn.net/nRyaf/10/" scrolling="no" frameborder="0" style="width: 0; min-width: 100% !important;" height="400"></iframe><script type="text/javascript">(function() {'use strict';window.addEventListener('message', function(event) {if (typeof event.data['datawrapper-height'] !== 'undefined') {for (var chartId in event.data['datawrapper-height']) {var iframe = document.getElementById('datawrapper-chart-' + chartId) || document.querySelector("iframe[src*='" + chartId + "']");if (!iframe) {continue;}iframe.style.height = event.data['datawrapper-height'][chartId] + 'px';}}});})();</script>
    

    Caveats

    • This data represents the number of cases and deaths reported by each state and has been collected by Johns Hopkins from a number of sources cited on their website.
    • In some cases, deaths or cases of people who've crossed state lines -- either to receive treatment or because they became sick and couldn't return home while traveling -- are reported in a state they aren't currently in, because of state reporting rules.
    • In some states, there are a number of cases not assigned to a specific county -- for those cases, the county name is "unassigned to a single county"
    • This data should be credited to Johns Hopkins University's COVID-19 tracking project. The AP is simply making it available here for ease of use for reporters and members.
    • Caseloads may reflect the availability of tests -- and the ability to turn around test results quickly -- rather than actual disease spread or true infection rates.
    • Population estimates at the county level are drawn from 2014-18 5-year estimates from the American Community Survey.
    • The Urban/Rural classification scheme is from the Center for Disease Control and Preventions's National Center for Health Statistics. It puts each county into one of six categories -- from Large Central Metro to Non-Core -- according to population and other characteristics. More details about the classifications can be found here.

    Johns Hopkins timeseries data - Johns Hopkins pulls data regularly to update their dashboard. Once a day, around 8pm EDT, Johns Hopkins adds the counts for all areas they cover to the timeseries file. These counts are snapshots of the latest cumulative counts provided by the source on that day. This can lead to inconsistencies if a source updates their historical data for accuracy, either increasing or decreasing the latest cumulative count. - Johns Hopkins periodically edits their historical timeseries data for accuracy. They provide a file documenting all errors in their timeseries files that they have identified and fixed here

    Attribution

    This data should be credited to Johns Hopkins University COVID-19 tracking project

  7. Data from: COVID-19 Case Surveillance Public Use Data with Geography

    • odgavaprod.ogopendata.com
    • datahub.hhs.gov
    • +4more
    csv, json, rdf, xsl
    Updated Feb 23, 2025
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    Centers for Disease Control and Prevention (2025). COVID-19 Case Surveillance Public Use Data with Geography [Dataset]. https://odgavaprod.ogopendata.com/dataset/covid-19-case-surveillance-public-use-data-with-geography
    Explore at:
    rdf, xsl, json, csvAvailable download formats
    Dataset updated
    Feb 23, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Description

    Note: Reporting of new COVID-19 Case Surveillance data will be discontinued July 1, 2024, to align with the process of removing SARS-CoV-2 infections (COVID-19 cases) from the list of nationally notifiable diseases. Although these data will continue to be publicly available, the dataset will no longer be updated.

    Authorizations to collect certain public health data expired at the end of the U.S. public health emergency declaration on May 11, 2023. The following jurisdictions discontinued COVID-19 case notifications to CDC: Iowa (11/8/21), Kansas (5/12/23), Kentucky (1/1/24), Louisiana (10/31/23), New Hampshire (5/23/23), and Oklahoma (5/2/23). Please note that these jurisdictions will not routinely send new case data after the dates indicated. As of 7/13/23, case notifications from Oregon will only include pediatric cases resulting in death.

    This case surveillance public use dataset has 19 elements for all COVID-19 cases shared with CDC and includes demographics, geography (county and state of residence), any exposure history, disease severity indicators and outcomes, and presence of any underlying medical conditions and risk behaviors.

    Currently, CDC provides the public with three versions of COVID-19 case surveillance line-listed data: this 19 data element dataset with geography, a 12 data element public use dataset, and a 33 data element restricted access dataset.

    The following apply to the public use datasets and the restricted access dataset:

    Overview

    The COVID-19 case surveillance database includes individual-level data reported to U.S. states and autonomous reporting entities, including New York City and the District of Columbia (D.C.), as well as U.S. territories and affiliates. On April 5, 2020, COVID-19 was added to the Nationally Notifiable Condition List and classified as “immediately notifiable, urgent (within 24 hours)” by a Council of State and Territorial Epidemiologists (CSTE) Interim Position Statement (<a href="https://cdn.ymaws.com/www.cste.org/resource/resmgr/ps/positionstatement2020/Interim-20-ID-01_COVID

  8. Weekly United States COVID-19 Cases and Deaths among Dialysis Patients -...

    • odgavaprod.ogopendata.com
    • healthdata.gov
    • +2more
    csv, json, rdf, xsl
    Updated Feb 23, 2025
    + more versions
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    Centers for Disease Control and Prevention (2025). Weekly United States COVID-19 Cases and Deaths among Dialysis Patients - ARCHIVED [Dataset]. https://odgavaprod.ogopendata.com/dataset/weekly-united-states-covid-19-cases-and-deaths-among-dialysis-patients-archived
    Explore at:
    xsl, csv, rdf, jsonAvailable download formats
    Dataset updated
    Feb 23, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Area covered
    United States
    Description

    Mandated reporting of Weekly Aggregate Case and Death Count data among dialysis patients and dialysis facility staff (healthcare personnel or HCP) in the United States was discontinued May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. This dataset will contain weekly aggregate data from January 1, 2021, through May 10, 2023, and will remain publicly available.

    This archived public use dataset contains reported COVID-19 case and death data per week for all states and territories, along with weekly totals for the entire United States, throughout the given timeframe.

  9. COVID-19 Time-Series Metrics by County and State (ARCHIVED)

    • data.chhs.ca.gov
    • data.ca.gov
    • +2more
    csv, xlsx, zip
    Updated Aug 28, 2024
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    California Department of Public Health (2024). COVID-19 Time-Series Metrics by County and State (ARCHIVED) [Dataset]. https://data.chhs.ca.gov/dataset/covid-19-time-series-metrics-by-county-and-state
    Explore at:
    csv(7729431), xlsx(7811), csv(4836928), xlsx(6471), csv(3313), xlsx(11305), csv(6223281), zipAvailable download formats
    Dataset updated
    Aug 28, 2024
    Dataset authored and provided by
    California Department of Public Healthhttps://www.cdph.ca.gov/
    Description

    Note: This COVID-19 data set is no longer being updated as of December 1, 2023. Access current COVID-19 data on the CDPH respiratory virus dashboard (https://www.cdph.ca.gov/Programs/CID/DCDC/Pages/Respiratory-Viruses/RespiratoryDashboard.aspx) or in open data format (https://data.chhs.ca.gov/dataset/respiratory-virus-dashboard-metrics).

    As of August 17, 2023, data is being updated each Friday.

    For death data after December 31, 2022, California uses Provisional Deaths from the Center for Disease Control and Prevention’s National Center for Health Statistics (NCHS) National Vital Statistics System (NVSS). Prior to January 1, 2023, death data was sourced from the COVID-19 registry. The change in data source occurred in July 2023 and was applied retroactively to all 2023 data to provide a consistent source of death data for the year of 2023.

    As of May 11, 2023, data on cases, deaths, and testing is being updated each Thursday. Metrics by report date have been removed, but previous versions of files with report date metrics are archived below.

    All metrics include people in state and federal prisons, US Immigration and Customs Enforcement facilities, US Marshal detention facilities, and Department of State Hospitals facilities. Members of California's tribal communities are also included.

    The "Total Tests" and "Positive Tests" columns show totals based on the collection date. There is a lag between when a specimen is collected and when it is reported in this dataset. As a result, the most recent dates on the table will temporarily show NONE in the "Total Tests" and "Positive Tests" columns. This should not be interpreted as no tests being conducted on these dates. Instead, these values will be updated with the number of tests conducted as data is received.

  10. Preliminary 2024-2025 U.S. COVID-19 Burden Estimates

    • data.cdc.gov
    • healthdata.gov
    • +1more
    csv, xlsx, xml
    Updated Sep 26, 2025
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    Coronavirus and Other Respiratory Viruses Division (CORVD), National Center for Immunization and Respiratory Diseases (NCIRD). (2025). Preliminary 2024-2025 U.S. COVID-19 Burden Estimates [Dataset]. https://data.cdc.gov/Public-Health-Surveillance/Preliminary-2024-2025-U-S-COVID-19-Burden-Estimate/ahrf-yqdt
    Explore at:
    xlsx, csv, xmlAvailable download formats
    Dataset updated
    Sep 26, 2025
    Dataset provided by
    National Center for Immunization and Respiratory Diseases
    Authors
    Coronavirus and Other Respiratory Viruses Division (CORVD), National Center for Immunization and Respiratory Diseases (NCIRD).
    License

    https://www.usa.gov/government-workshttps://www.usa.gov/government-works

    Area covered
    United States
    Description

    This dataset represents preliminary estimates of cumulative U.S. COVID-19 disease burden for the 2024-2025 period, including illnesses, outpatient visits, hospitalizations, and deaths. The weekly COVID-19-associated burden estimates are preliminary and based on continuously collected surveillance data from patients hospitalized with laboratory-confirmed severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections. The data come from the Coronavirus Disease 2019 (COVID-19)-Associated Hospitalization Surveillance Network (COVID-NET), a surveillance platform that captures data from hospitals that serve about 10% of the U.S. population. Each week CDC estimates a range (i.e., lower estimate and an upper estimate) of COVID-19 -associated burden that have occurred since October 1, 2024.

    Note: Data are preliminary and subject to change as more data become available. Rates for recent COVID-19-associated hospital admissions are subject to reporting delays; as new data are received each week, previous rates are updated accordingly.

    References

    1. Reed C, Chaves SS, Daily Kirley P, et al. Estimating influenza disease burden from population-based surveillance data in the United States. PLoS One. 2015;10(3):e0118369. https://doi.org/10.1371/journal.pone.0118369 
    2. Rolfes, MA, Foppa, IM, Garg, S, et al. Annual estimates of the burden of seasonal influenza in the United States: A tool for strengthening influenza surveillance and preparedness. Influenza Other Respi Viruses. 2018; 12: 132– 137. https://doi.org/10.1111/irv.12486
    3. Tokars JI, Rolfes MA, Foppa IM, Reed C. An evaluation and update of methods for estimating the number of influenza cases averted by vaccination in the United States. Vaccine. 2018;36(48):7331-7337. doi:10.1016/j.vaccine.2018.10.026 
    4. Collier SA, Deng L, Adam EA, Benedict KM, Beshearse EM, Blackstock AJ, Bruce BB, Derado G, Edens C, Fullerton KE, Gargano JW, Geissler AL, Hall AJ, Havelaar AH, Hill VR, Hoekstra RM, Reddy SC, Scallan E, Stokes EK, Yoder JS, Beach MJ. Estimate of Burden and Direct Healthcare Cost of Infectious Waterborne Disease in the United States. Emerg Infect Dis. 2021 Jan;27(1):140-149. doi: 10.3201/eid2701.190676. PMID: 33350905; PMCID: PMC7774540.
    5. Reed C, Kim IK, Singleton JA,  et al. Estimated influenza illnesses and hospitalizations averted by vaccination–United States, 2013-14 influenza season. MMWR Morb Mortal Wkly Rep. 2014 Dec 12;63(49):1151-4. https://www.cdc.gov/mmwr/preview/mmwrhtml/mm6349a2.htm 
    6. Reed C, Angulo FJ, Swerdlow DL, et al. Estimates of the Prevalence of Pandemic (H1N1) 2009, United States, April–July 2009. Emerg Infect Dis. 2009;15(12):2004-2007. https://dx.doi.org/10.3201/eid1512.091413
    7. Devine O, Pham H, Gunnels B, et al. Extrapolating Sentinel Surveillance Information to Estimate National COVID-19 Hospital Admission Rates: A Bayesian Modeling Approach. Influenza and Other Respiratory Viruses. https://onlinelibrary.wiley.com/doi/10.1111/irv.70026. Volume18, Issue10. October 2024.
    8. https://www.cdc.gov/covid/php/covid-net/index.html">COVID-NET | COVID-19 | CDC 
    9. https://www.cdc.gov/covid/hcp/clinical-care/systematic-review-process.html 
    10. https://academic.oup.com/pnasnexus/article/1/3/pgac079/6604394?login=false">Excess natural-cause deaths in California by cause and setting: March 2020 through February 2021 | PNAS Nexus | Oxford Academic (oup.com)
    11. Kruschke, J. K. 2011. Doing Bayesian data analysis: a tutorial with R and BUGS. Elsevier, Amsterdam, Section 3.3.5.

  11. Corona Virus Covid-19 US Counties

    • kaggle.com
    Updated Aug 22, 2022
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    Yasir Raza (2022). Corona Virus Covid-19 US Counties [Dataset]. https://www.kaggle.com/datasets/yasirabdaali/corona-virus-covid19-us-counties
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    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Aug 22, 2022
    Dataset provided by
    Kaggle
    Authors
    Yasir Raza
    License

    https://creativecommons.org/publicdomain/zero/1.0/https://creativecommons.org/publicdomain/zero/1.0/

    Area covered
    United States
    Description

    This dataset contains the covid-19 pandemic data of the years 2020, 2021 and 2022 of the United States. It has the following information; 1. The FIPS code 2. The State 3. City or Town 4. Date 5. Total Death 6. Total Confirmed Cases 7. The location (longitude and latitude)

  12. Weekly United States COVID-19 Cases and Deaths by County - ARCHIVED

    • data.virginia.gov
    • healthdata.gov
    • +1more
    csv, json, rdf, xsl
    Updated Jan 13, 2025
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    Centers for Disease Control and Prevention (2025). Weekly United States COVID-19 Cases and Deaths by County - ARCHIVED [Dataset]. https://data.virginia.gov/dataset/weekly-united-states-covid-19-cases-and-deaths-by-county-archived
    Explore at:
    xsl, csv, rdf, jsonAvailable download formats
    Dataset updated
    Jan 13, 2025
    Dataset provided by
    Centers for Disease Control and Preventionhttp://www.cdc.gov/
    Area covered
    United States
    Description

    Note: The cumulative case count for some counties (with small population) is higher than expected due to the inclusion of non-permanent residents in COVID-19 case counts.

    Reporting of Aggregate Case and Death Count data was discontinued on May 11, 2023, with the expiration of the COVID-19 public health emergency declaration. Although these data will continue to be publicly available, this dataset will no longer be updated.

    Aggregate Data Collection Process Since the beginning of the COVID-19 pandemic, data were reported through a robust process with the following steps:

    • Aggregate county-level counts were obtained indirectly, via automated overnight web collection, or directly, via a data submission process.
    • If more than one official county data source existed, CDC used a comprehensive data selection process comparing each official county data source to retrieve the highest case and death counts, unless otherwise specified by the state.
    • A CDC data team reviewed counts for congruency prior to integration. CDC routinely compiled these data and post the finalized information on COVID Data Tracker.
    • Cases and deaths are based on date of report and not on the date of symptom onset. CDC calculates rates in this data by using population estimates provided by the US Census Bureau Population Estimates Program (2019 Vintage).
    • COVID-19 aggregate case and death data were organized in a time series that includes cumulative number of cases and deaths as reported by a jurisdiction on a given date. New case and death counts were calculated as the week-to-week change in reported cumulative cases and deaths (i.e., newly reported cases and deaths = cumulative number of cases/deaths reported this week minus the cumulative total reported the week before.

    This process was collaborative, with CDC and jurisdictions working together to ensure the accuracy of COVID-19 case and death numbers. County counts provided the most up-to-date numbers on cases and deaths by report date. Throughout data collection, CDC retrospectively updated counts to correct known data quality issues. CDC also worked with jurisdictions after the end of the public health emergency declaration to finalize county data.

    • Source: The weekly archived dataset is based on county-level aggregate count data
    • Confirmed/Probable Cases/Death breakdown: Cumulative cases and deaths for each county are included. Total reported cases include probable and confirmed cases.
    • Time Series Frequency: The weekly archived dataset contains weekly time series data (i.e., one record per week per county)

    Important note: The counts reflected during a given time period in this dataset may not match the counts reflected for the same time period in the daily archived dataset noted above. Discrepancies may exist due to differences between county and state COVID-19 case surveillance and reconciliation efforts.

    The surveillance case definition for COVID-19, a nationally notifiable disease, was first described in a position statement from the Council for State and Territorial Epidemiologists, which was later revised. However, there is some variation in how jurisdictions implement these case classifications. More information on how CDC collects COVID-19 case surveillance data can be found at FAQ: COVID-19 Data and Surveillance.

    Confirmed and Probable Counts In this dataset, counts by jurisdiction are not displayed by confirmed or probable status. Instead, counts of confirmed and probable cases and deaths are included in the Total Cases and Total Deaths columns, when available. Not all jurisdictions report

  13. US counties COVID 19 dataset

    • kaggle.com
    zip
    Updated Dec 24, 2021
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    MyrnaMFL (2021). US counties COVID 19 dataset [Dataset]. http://doi.org/10.34740/kaggle/dsv/2966461
    Explore at:
    zip(23213106 bytes)Available download formats
    Dataset updated
    Dec 24, 2021
    Authors
    MyrnaMFL
    Area covered
    United States
    Description

    From the New York Times GITHUB source: CSV US counties "The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

    Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

    We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

    The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository. United States Data

    Data on cumulative coronavirus cases and deaths can be found in two files for states and counties.

    Each row of data reports cumulative counts based on our best reporting up to the moment we publish an update. We do our best to revise earlier entries in the data when we receive new information."

    The specific data here, is the data PER US COUNTY.

    The CSV link for counties is: https://raw.githubusercontent.com/nytimes/covid-19-data/master/us-counties.csv

  14. A

    The New York Times Coronavirus (Covid-19) Cases and Deaths in the United...

    • data.amerigeoss.org
    csv
    Updated Jun 5, 2025
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    UN Humanitarian Data Exchange (2025). The New York Times Coronavirus (Covid-19) Cases and Deaths in the United States [Dataset]. https://data.amerigeoss.org/km/dataset/nyt-covid-19-data
    Explore at:
    csvAvailable download formats
    Dataset updated
    Jun 5, 2025
    Dataset provided by
    UN Humanitarian Data Exchange
    Area covered
    United States
    Description

    The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

    Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

    We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

    The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

    United States Data

    Data on cumulative coronavirus cases and deaths can be found in two files for states and counties.

    Each row of data reports cumulative counts based on our best reporting up to the moment we publish an update. We do our best to revise earlier entries in the data when we receive new information.

    Both files contain FIPS codes, a standard geographic identifier, to make it easier for an analyst to combine this data with other data sets like a map file or population data.

    State-Level Data

    State-level data can be found in the us-states.csv file.

    date,state,fips,cases,deaths
    2020-01-21,Washington,53,1,0
    ...
    

    County-Level Data

    County-level data can be found in the us-counties.csv file.

    date,county,state,fips,cases,deaths
    2020-01-21,Snohomish,Washington,53061,1,0
    ...
    

    In some cases, the geographies where cases are reported do not map to standard county boundaries. See the list of geographic exceptions for more detail on these.

    Github Repository

    This dataset contains COVID-19 data for the United States of America made available by The New York Times on github at https://github.com/nytimes/covid-19-data

  15. T

    United States Coronavirus COVID-19 Deaths

    • tradingeconomics.com
    csv, excel, json, xml
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    TRADING ECONOMICS, United States Coronavirus COVID-19 Deaths [Dataset]. https://tradingeconomics.com/united-states/coronavirus-deaths
    Explore at:
    json, xml, csv, excelAvailable download formats
    Dataset authored and provided by
    TRADING ECONOMICS
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Time period covered
    Jan 22, 2020 - May 17, 2023
    Area covered
    United States
    Description

    United States recorded 1127152 Coronavirus Deaths since the epidemic began, according to the World Health Organization (WHO). In addition, United States reported 103436829 Coronavirus Cases. This dataset includes a chart with historical data for the United States Coronavirus Deaths.

  16. g

    Coronavirus COVID-19 Global Cases by the Center for Systems Science and...

    • github.com
    • systems.jhu.edu
    • +1more
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    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE), Coronavirus COVID-19 Global Cases by the Center for Systems Science and Engineering (CSSE) at Johns Hopkins University (JHU) [Dataset]. https://github.com/CSSEGISandData/COVID-19
    Explore at:
    Dataset provided by
    Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE)
    Area covered
    Global
    Description

    2019 Novel Coronavirus COVID-19 (2019-nCoV) Visual Dashboard and Map:
    https://www.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6

    • Confirmed Cases by Country/Region/Sovereignty
    • Confirmed Cases by Province/State/Dependency
    • Deaths
    • Recovered

    Downloadable data:
    https://github.com/CSSEGISandData/COVID-19

    Additional Information about the Visual Dashboard:
    https://systems.jhu.edu/research/public-health/ncov

  17. covid_us_states

    • redivis.com
    Updated Apr 1, 2020
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    Redivis Demo Organization (2020). covid_us_states [Dataset]. https://redivis.com/datasets/28ec-fsftysdhj
    Explore at:
    Dataset updated
    Apr 1, 2020
    Dataset provided by
    Redivis Inc.
    Authors
    Redivis Demo Organization
    Time period covered
    Jan 21, 2020 - Feb 16, 2021
    Area covered
    United States
    Description

    Cumulative cases and deaths by date, by US state

    The table covid_us_states is part of the dataset NYT COVID US Cases & Deaths, available at https://redivis.com/datasets/28ec-fsftysdhj. It contains 19319 rows across 5 variables.

  18. US COVID-19 Cases and Deaths by State Over Time

    • johnsnowlabs.com
    csv
    Updated Jan 20, 2021
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    John Snow Labs (2021). US COVID-19 Cases and Deaths by State Over Time [Dataset]. https://www.johnsnowlabs.com/marketplace/us-covid-19-cases-and-deaths-by-state-over-time/
    Explore at:
    csvAvailable download formats
    Dataset updated
    Jan 20, 2021
    Dataset authored and provided by
    John Snow Labs
    Time period covered
    2020 - 2022
    Area covered
    United States
    Description

    This dataset shows the United States COVID-19 cases and deaths by state over time. This dataset is provided by the CDC Case Task Force.

  19. d

    ARCHIVED: COVID-19 Cases and Deaths Summarized by Geography

    • catalog.data.gov
    Updated Mar 29, 2025
    + more versions
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    data.sfgov.org (2025). ARCHIVED: COVID-19 Cases and Deaths Summarized by Geography [Dataset]. https://catalog.data.gov/dataset/covid-19-cases-and-deaths-summarized-by-geography
    Explore at:
    Dataset updated
    Mar 29, 2025
    Dataset provided by
    data.sfgov.org
    Description

    A. SUMMARY Medical provider confirmed COVID-19 cases and confirmed COVID-19 related deaths in San Francisco, CA aggregated by several different geographic areas and normalized by 2016-2020 American Community Survey (ACS) 5-year estimates for population data to calculate rate per 10,000 residents. On September 12, 2021, a new case definition of COVID-19 was introduced that includes criteria for enumerating new infections after previous probable or confirmed infections (also known as reinfections). A reinfection is defined as a confirmed positive PCR lab test more than 90 days after a positive PCR or antigen test. The first reinfection case was identified on December 7, 2021. Cases and deaths are both mapped to the residence of the individual, not to where they were infected or died. For example, if one was infected in San Francisco at work but lives in the East Bay, those are not counted as SF Cases or if one dies in Zuckerberg San Francisco General but is from another county, that is also not counted in this dataset. Dataset is cumulative and covers cases going back to 3/2/2020 when testing began. Geographic areas summarized are: 1. Analysis Neighborhoods 2. Census Tracts 3. Census Zip Code Tabulation Areas B. HOW THE DATASET IS CREATED Addresses from medical data are geocoded by the San Francisco Department of Public Health (SFDPH). Those addresses are spatially joined to the geographic areas. Counts are generated based on the number of address points that match each geographic area. The 2016-2020 American Community Survey (ACS) population estimates provided by the Census are used to create a rate which is equal to ([count] / [acs_population]) * 10000) representing the number of cases per 10,000 residents. C. UPDATE PROCESS Geographic analysis is scripted by SFDPH staff and synced to this dataset daily at 7:30 Pacific Time. D. HOW TO USE THIS DATASET San Francisco population estimates for geographic regions can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS). Privacy rules in effect To protect privacy, certain rules are in effect: 1. Case counts greater than 0 and less than 10 are dropped - these will be null (blank) values 2. Death counts greater than 0 and less than 10 are dropped - these will be null (blank) values 3. Cases and deaths dropped altogether for areas where acs_population < 1000 Rate suppression in effect where counts lower than 20 Rates are not calculated unless the case count is greater than or equal to 20. Rates are generally unstable at small numbers, so we avoid calculating them directly. We advise you to apply the same approach as this is best practice in epidemiology. A note on Census ZIP Code Tabulation Areas (ZCTAs) ZIP Code Tabulation Areas are special boundaries created by the U.S. Census based on ZIP Codes developed by the USPS. They are not, however, the same thing. ZCTAs are areal representations of routes. Read how the Census develops ZCTAs on their website. Row included for Citywide case counts, incidence rate, and deaths A single row is included that has the Citywide case counts and incidence rate. This can be used for comparisons. Citywide will capture all cases regardless of address quality. While some cases cannot be mapped to sub-areas like Census Tracts, ongo

  20. Covid-19 USA States Cleaned Historical and Current

    • kaggle.com
    Updated Oct 19, 2020
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    bioinfoacademy (2020). Covid-19 USA States Cleaned Historical and Current [Dataset]. https://www.kaggle.com/datasets/bioinfoacademy/covid19-usa-states-cleaned-historical-and-current/suggestions
    Explore at:
    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Oct 19, 2020
    Dataset provided by
    Kaggle
    Authors
    bioinfoacademy
    License

    http://www.gnu.org/licenses/old-licenses/gpl-2.0.en.htmlhttp://www.gnu.org/licenses/old-licenses/gpl-2.0.en.html

    Area covered
    United States
    Description

    Context

    CDC data is more clean, but incomplete as weekend data are not available. JHU data has several inconsistencies. Several Kaggle Covid-19 datasets dont have the complete historical information for US, starting Jan 21. Several Kaggle Covid-19 datasets does not have info for all the US territories.

    Content

    For dates until March 10, 2020, the US State-by-state Covid-19 confirmed cases data was obtained from the last available CNN report For dates from March 10 to March 17, 2020, the US State-by-state Covid-19 confirmed cases data was extracted from JHU data For dates from March 18 2020, the US State-by-state Covid-19 confirmed cases data is extracted from CDC For dates after March 20, 2020, weekend case numbers are obtained from the last available CNN report For dates after July 25, 2020, data are extracted from daily JHU data update

    Acknowledgements

    CDC CNN JHU

    Inspiration

    Lets beat the Covid-19 and save some lives.

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Close
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New York Times, Coronavirus (Covid-19) Data in the United States [Dataset]. https://www.nytimes.com/interactive/2020/us/coronavirus-us-cases.html

Coronavirus (Covid-19) Data in the United States

Explore at:
Dataset provided by
New York Times
Description

The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

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