The New York Times is releasing a series of data files with cumulative counts of coronavirus cases in the United States, at the state and county level, over time. We are compiling this time series data from state and local governments and health departments in an attempt to provide a complete record of the ongoing outbreak.

Since late January, The Times has tracked cases of coronavirus in real time as they were identified after testing. Because of the widespread shortage of testing, however, the data is necessarily limited in the picture it presents of the outbreak.

We have used this data to power our maps and reporting tracking the outbreak, and it is now being made available to the public in response to requests from researchers, scientists and government officials who would like access to the data to better understand the outbreak.

The data begins with the first reported coronavirus case in Washington State on Jan. 21, 2020. We will publish regular updates to the data in this repository.

Provisional deaths registration data for single year of age and average age of death (median and mean) of persons whose death involved coronavirus (COVID-19), England and Wales. Includes deaths due to COVID-19 and breakdowns by sex.

Updates

• Notice of data discontinuation: Since the start of the pandemic, AP has reported case and death counts from data provided by Johns Hopkins University. Johns Hopkins University has announced that they will stop their daily data collection efforts after March 10. As Johns Hopkins stops providing data, the AP will also stop collecting daily numbers for COVID cases and deaths. The HHS and CDC now collect and visualize key metrics for the pandemic. AP advises using those resources when reporting on the pandemic going forward.

  • CDC Weekly case and death counts (national and state level)
  • CDC County level cases and deaths
  • HHS New hospital admissions
  • CDC NowCast COVID variant proportions (national and regional level)

• April 9, 2020

  • The population estimate data for New York County, NY has been updated to include all five New York City counties (Kings County, Queens County, Bronx County, Richmond County and New York County). This has been done to match the Johns Hopkins COVID-19 data, which aggregates counts for the five New York City counties to New York County.

• April 20, 2020

  • Johns Hopkins death totals in the US now include confirmed and probable deaths in accordance with CDC guidelines as of April 14. One significant result of this change was an increase of more than 3,700 deaths in the New York City count. This change will likely result in increases for death counts elsewhere as well. The AP does not alter the Johns Hopkins source data, so probable deaths are included in this dataset as well.

• April 29, 2020

  • The AP is now providing timeseries data for counts of COVID-19 cases and deaths. The raw counts are provided here unaltered, along with a population column with Census ACS-5 estimates and calculated daily case and death rates per 100,000 people. Please read the updated caveats section for more information.

• September 1st, 2020

  • Johns Hopkins is now providing counts for the five New York City counties individually.

• February 12, 2021

  • The Ohio Department of Health recently announced that as many as 4,000 COVID-19 deaths may have been underreported through the state’s reporting system, and that the "daily reported death counts will be high for a two to three-day period."
  • Because deaths data will be anomalous for consecutive days, we have chosen to freeze Ohio's rolling average for daily deaths at the last valid measure until Johns Hopkins is able to back-distribute the data. The raw daily death counts, as reported by Johns Hopkins and including the backlogged death data, will still be present in the new_deaths column.

• February 16, 2021

  - Johns Hopkins has reconciled Ohio's historical deaths data with the state.

  Overview

The AP is using data collected by the Johns Hopkins University Center for Systems Science and Engineering as our source for outbreak caseloads and death counts for the United States and globally.

The Hopkins data is available at the county level in the United States. The AP has paired this data with population figures and county rural/urban designations, and has calculated caseload and death rates per 100,000 people. Be aware that caseloads may reflect the availability of tests -- and the ability to turn around test results quickly -- rather than actual disease spread or true infection rates.

This data is from the Hopkins dashboard that is updated regularly throughout the day. Like all organizations dealing with data, Hopkins is constantly refining and cleaning up their feed, so there may be brief moments where data does not appear correctly. At this link, you’ll find the Hopkins daily data reports, and a clean version of their feed.

The AP is updating this dataset hourly at 45 minutes past the hour.

To learn more about AP's data journalism capabilities for publishers, corporations and financial institutions, go here or email kromano@ap.org.

Queries

Use AP's queries to filter the data or to join to other datasets we've made available to help cover the coronavirus pandemic

• Filter cases by state here

• Rank states by their status as current hotspots. Calculates the 7-day rolling average of new cases per capita in each state: https://data.world/associatedpress/johns-hopkins-coronavirus-case-tracker/workspace/query?queryid=481e82a4-1b2f-41c2-9ea1-d91aa4b3b1ac

• Find recent hotspots within your state by running a query to calculate the 7-day rolling average of new cases by capita in each county: https://data.world/associatedpress/johns-hopkins-coronavirus-case-tracker/workspace/query?queryid=b566f1db-3231-40fe-8099-311909b7b687&showTemplatePreview=true

• Join county-level case data to an earlier dataset released by AP on local hospital capacity here. To find out more about the hospital capacity dataset, see the full details.

• Pull the 100 counties with the highest per-capita confirmed cases here

• Rank all the counties by the highest per-capita rate of new cases in the past 7 days here. Be aware that because this ranks per-capita caseloads, very small counties may rise to the very top, so take into account raw caseload figures as well.

Interactive

The AP has designed an interactive map to track COVID-19 cases reported by Johns Hopkins.

@(https://datawrapper.dwcdn.net/nRyaf/15/)

Interactive Embed Code

<iframe title="USA counties (2018) choropleth map Mapping COVID-19 cases by county" aria-describedby="" id="datawrapper-chart-nRyaf" src="https://datawrapper.dwcdn.net/nRyaf/10/" scrolling="no" frameborder="0" style="width: 0; min-width: 100% !important;" height="400"></iframe><script type="text/javascript">(function() {'use strict';window.addEventListener('message', function(event) {if (typeof event.data['datawrapper-height'] !== 'undefined') {for (var chartId in event.data['datawrapper-height']) {var iframe = document.getElementById('datawrapper-chart-' + chartId) || document.querySelector("iframe[src*='" + chartId + "']");if (!iframe) {continue;}iframe.style.height = event.data['datawrapper-height'][chartId] + 'px';}}});})();</script>

Caveats

• This data represents the number of cases and deaths reported by each state and has been collected by Johns Hopkins from a number of sources cited on their website.
• In some cases, deaths or cases of people who've crossed state lines -- either to receive treatment or because they became sick and couldn't return home while traveling -- are reported in a state they aren't currently in, because of state reporting rules.
• In some states, there are a number of cases not assigned to a specific county -- for those cases, the county name is "unassigned to a single county"
• This data should be credited to Johns Hopkins University's COVID-19 tracking project. The AP is simply making it available here for ease of use for reporters and members.
• Caseloads may reflect the availability of tests -- and the ability to turn around test results quickly -- rather than actual disease spread or true infection rates.
• Population estimates at the county level are drawn from 2014-18 5-year estimates from the American Community Survey.
• The Urban/Rural classification scheme is from the Center for Disease Control and Preventions's National Center for Health Statistics. It puts each county into one of six categories -- from Large Central Metro to Non-Core -- according to population and other characteristics. More details about the classifications can be found here.

Johns Hopkins timeseries data - Johns Hopkins pulls data regularly to update their dashboard. Once a day, around 8pm EDT, Johns Hopkins adds the counts for all areas they cover to the timeseries file. These counts are snapshots of the latest cumulative counts provided by the source on that day. This can lead to inconsistencies if a source updates their historical data for accuracy, either increasing or decreasing the latest cumulative count. - Johns Hopkins periodically edits their historical timeseries data for accuracy. They provide a file documenting all errors in their timeseries files that they have identified and fixed here

Attribution

This data should be credited to Johns Hopkins University COVID-19 tracking project

NOTE: This dataset has been retired and marked as historical-only. This dataset is a companion to the COVID-19 Daily Cases and Deaths dataset (https://data.cityofchicago.org/d/naz8-j4nc). The major difference in this dataset is that the case, death, and hospitalization corresponding rates per 100,000 population are not those for the single date indicated. They are rolling averages for the seven-day period ending on that date. This rolling average is used to account for fluctuations that may occur in the data, such as fewer cases being reported on weekends, and small numbers. The intent is to give a more representative view of the ongoing COVID-19 experience, less affected by what is essentially noise in the data. All rates are per 100,000 population in the indicated group, or Chicago, as a whole, for “Total” columns. Only Chicago residents are included based on the home address as provided by the medical provider. Cases with a positive molecular (PCR) or antigen test are included in this dataset. Cases are counted based on the date the test specimen was collected. Deaths among cases are aggregated by day of death. Hospitalizations are reported by date of first hospital admission. Demographic data are based on what is reported by medical providers or collected by CDPH during follow-up investigation. Denominators are from the U.S. Census Bureau American Community Survey 1-year estimate for 2018 and can be seen in the Citywide, 2018 row of the Chicago Population Counts dataset (https://data.cityofchicago.org/d/85cm-7uqa). All data are provisional and subject to change. Information is updated as additional details are received and it is, in fact, very common for recent dates to be incomplete and to be updated as time goes on. At any given time, this dataset reflects cases and deaths currently known to CDPH. Numbers in this dataset may differ from other public sources due to definitions of COVID-19-related cases and deaths, sources used, how cases and deaths are associated to a specific date, and similar factors. Data Source: Illinois National Electronic Disease Surveillance System, Cook County Medical Examiner’s Office, U.S. Census Bureau American Community Survey

Understanding Global Excess Deaths During the COVID-19 Pandemic: Insights from The Economist Data

The COVID-19 pandemic has left an indelible mark on societies worldwide, not only through its direct impact on health but also through its ripple effects on various aspects of life. As we strive to comprehend the full extent of its toll, one crucial metric that emerges is excess deaths – a measure encompassing not only confirmed COVID-19 fatalities but also those indirectly caused by the pandemic. In this discourse, we delve into the comprehensive dataset provided by The Economist and processed by Our World in Data, shedding light on the central estimates and uncertainty intervals of global excess deaths.

The dataset, meticulously compiled and analyzed by The Economist, serves as a cornerstone for understanding the broader implications of the pandemic beyond official death counts. This invaluable resource, available for public scrutiny and further research, offers insights into the nuanced dynamics of excess mortality across different regions and timeframes.

Central to our exploration are the central estimates provided by The Economist, representing the best approximation of excess deaths attributable to the pandemic. These figures, derived through rigorous statistical methodologies, provide a foundational understanding of the pandemic's impact on mortality rates globally. By accounting for excess deaths beyond what would typically be expected, these estimates paint a clearer picture of the true toll of COVID-19.

Accompanying these central estimates are uncertainty intervals, reflecting the range within which the true value of excess deaths is likely to fall. As with any statistical analysis, uncertainties abound, stemming from various factors such as data collection methods, reporting inconsistencies, and the inherent complexity of modeling excess mortality. Acknowledging these uncertainties is paramount in interpreting the data accurately and avoiding overgeneralizations or misinterpretations.

Delving deeper into the dataset, it becomes evident that the magnitude of excess deaths varies significantly across different regions and time periods. Factors such as healthcare infrastructure, socio-economic disparities, and the stringency of public health measures exert profound influences on mortality outcomes. By dissecting these variations, policymakers and public health experts can glean invaluable insights to inform targeted interventions and mitigate future crises.

Moreover, the dataset underscores the interconnectedness of global health, highlighting how the impact of the pandemic transcends geographical boundaries. As nations grapple with containing the spread of the virus within their borders, the ripple effects of excess mortality reverberate across the international community. This interconnectedness underscores the importance of collective action and solidarity in addressing not only the immediate challenges posed by the pandemic but also the long-term ramifications on global health security.

It is essential to note that behind every data point lies a human story – a life lost, a family shattered, a community grieving. Amidst the statistical analyses and epidemiological models, it is imperative not to lose sight of the human dimension of the pandemic. Each excess death represents more than just a number; it embodies a profound loss and underscores the urgency of concerted efforts to prevent further tragedies.

In conclusion, the dataset provided by The Economist and processed by Our World in Data offers a comprehensive lens through which to understand the complexities of excess mortality during the COVID-19 pandemic. By interrogating the central estimates and uncertainty intervals, we gain critical insights into the multifaceted dimensions of the pandemic's impact on global mortality rates. Moving forward, leveraging these insights to inform evidence-based policies and interventions is paramount in mitigating the ongoing crisis and building resilient health systems for the future.

A. SUMMARY This dataset shows San Francisco COVID-19 deaths by population characteristics. This data may not be immediately available for recently reported deaths. Data updates as more information becomes available. Because of this, death totals may increase or decrease.

Population characteristics are subgroups, or demographic cross-sections, like age, race, or gender. The City tracks how deaths have been distributed among different subgroups. This information can reveal trends and disparities among groups.

B. HOW THE DATASET IS CREATED As of January 1, 2023, COVID-19 deaths are defined as persons who had COVID-19 listed as a cause of death or a significant condition contributing to their death on their death certificate. This definition is in alignment with the California Department of Public Health and the national https://preparedness.cste.org/wp-content/uploads/2022/12/CSTE-Revised-Classification-of-COVID-19-associated-Deaths.Final_.11.22.22.pdf">Council of State and Territorial Epidemiologists. Death certificates are maintained by the California Department of Public Health.

Data on the population characteristics of COVID-19 deaths are from: *Case reports *Medical records *Electronic lab reports *Death certificates

Data are continually updated to maximize completeness of information and reporting on San Francisco COVID-19 deaths.

To protect resident privacy, we summarize COVID-19 data by only one population characteristic at a time. Data are not shown until cumulative citywide deaths reach five or more.

Data notes on select population characteristic types are listed below.

Race/ethnicity * We include all race/ethnicity categories that are collected for COVID-19 cases.

Gender * The City collects information on gender identity using these guidelines.

C. UPDATE PROCESS Updates automatically at 06:30 and 07:30 AM Pacific Time on Wednesday each week.

Dataset will not update on the business day following any federal holiday.

D. HOW TO USE THIS DATASET Population estimates are only available for age groups and race/ethnicity categories. San Francisco population estimates for race/ethnicity and age groups can be found in a dataset based on the San Francisco Population and Demographic Census dataset.These population estimates are from the 2018-2022 5-year American Community Survey (ACS).

This dataset includes several characteristic types. Filter the “Characteristic Type” column to explore a topic area. Then, the “Characteristic Group” column shows each group or category within that topic area and the number of cumulative deaths.

Cumulative deaths are the running total of all San Francisco COVID-19 deaths in that characteristic group up to the date listed.

To explore data on the total number of deaths, use the COVID-19 Deaths Over Time dataset.

E. CHANGE LOG

NOTE: This dataset has been retired and marked as historical-only.

Only Chicago residents are included based on the home ZIP Code as provided by the medical provider. If a ZIP was missing or was not valid, it is displayed as "Unknown".

Cases with a positive molecular (PCR) or antigen test are included in this dataset. Cases are counted based on the week the test specimen was collected. For privacy reasons, until a ZIP Code reaches five cumulative cases, both the weekly and cumulative case counts will be blank. Therefore, summing the “Cases - Weekly” column is not a reliable way to determine case totals. Deaths are those that have occurred among cases based on the week of death.

For tests, each test is counted once, based on the week the test specimen was collected. Tests performed prior to 3/1/2020 are not included. Test counts include multiple tests for the same person (a change made on 10/29/2020). PCR and antigen tests reported to Chicago Department of Public Health (CDPH) through electronic lab reporting are included. Electronic lab reporting has taken time to onboard and testing availability has shifted over time, so these counts are likely an underestimate of community infection.

The “Percent Tested Positive” columns are calculated by dividing the number of positive tests by the number of total tests . Because of the data limitations for the Tests columns, such as persons being tested multiple times as a requirement for employment, these percentages may vary in either direction from the actual disease prevalence in the ZIP Code.

NOTE: This dataset has been retired and marked as historical-only. Weekly rates of COVID-19 cases, hospitalizations, and deaths among people living in Chicago by vaccination status and age. Rates for fully vaccinated and unvaccinated begin the week ending April 3, 2021 when COVID-19 vaccines became widely available in Chicago. Rates for boosted begin the week ending October 23, 2021 after booster shots were recommended by the Centers for Disease Control and Prevention (CDC) for adults 65+ years old and adults in certain populations and high risk occupational and institutional settings who received Pfizer or Moderna for their primary series or anyone who received the Johnson & Johnson vaccine. Chicago residency is based on home address, as reported in the Illinois Comprehensive Automated Immunization Registry Exchange (I-CARE) and Illinois National Electronic Disease Surveillance System (I-NEDSS). Outcomes: • Cases: People with a positive molecular (PCR) or antigen COVID-19 test result from an FDA-authorized COVID-19 test that was reported into I-NEDSS. A person can become re-infected with SARS-CoV-2 over time and so may be counted more than once in this dataset. Cases are counted by week the test specimen was collected. • Hospitalizations: COVID-19 cases who are hospitalized due to a documented COVID-19 related illness or who are admitted for any reason within 14 days of a positive SARS-CoV-2 test. Hospitalizations are counted by week of hospital admission. • Deaths: COVID-19 cases who died from COVID-19-related health complications as determined by vital records or a public health investigation. Deaths are counted by week of death. Vaccination status: • Fully vaccinated: Completion of primary series of a U.S. Food and Drug Administration (FDA)-authorized or approved COVID-19 vaccine at least 14 days prior to a positive test (with no other positive tests in the previous 45 days). • Boosted: Fully vaccinated with an additional or booster dose of any FDA-authorized or approved COVID-19 vaccine received at least 14 days prior to a positive test (with no other positive tests in the previous 45 days). • Unvaccinated: No evidence of having received a dose of an FDA-authorized or approved vaccine prior to a positive test. CLARIFYING NOTE: Those who started but did not complete all recommended doses of an FDA-authorized or approved vaccine prior to a positive test (i.e., partially vaccinated) are excluded from this dataset. Incidence rates for fully vaccinated but not boosted people (Vaccinated columns) are calculated as total fully vaccinated but not boosted with outcome divided by cumulative fully vaccinated but not boosted at the end of each week. Incidence rates for boosted (Boosted columns) are calculated as total boosted with outcome divided by cumulative boosted at the end of each week. Incidence rates for unvaccinated (Unvaccinated columns) are calculated as total unvaccinated with outcome divided by total population minus cumulative boosted, fully, and partially vaccinated at the end of each week. All rates are multiplied by 100,000. Incidence rate ratios (IRRs) are calculated by dividing the weekly incidence rates among unvaccinated people by those among fully vaccinated but not boosted and boosted people. Overall age-adjusted incidence rates and IRRs are standardized using the 2000 U.S. Census standard population. Population totals are from U.S. Census Bureau American Community Survey 1-year estimates for 2019. All data are provisional and subject to change. Information is updated as additional details are received and it is, in fact, very common for recent dates to be incomplete and to be updated as time goes on. This dataset reflects data known to CDPH at the time when the dataset is updated each week. Numbers in this dataset may differ from other public sources due to when data are reported and how City of Chicago boundaries are defined. For all datasets related to COVID-19, see https://data.cityofchic

In collaboration with the Public Health Agency of Canada (PHAC), this table provides Canadians and researchers with data to monitor only the confirmed cases of coronavirus (COVID-19) in Canada. This table will provide an aggregate summary of the data available in the publication 13-26-0003.

Detroit-specific ZIP code populations, along with their cumulative COVID case counts, deaths, and rates. Data provided by Detroit Health Department. The public-facing COVID Cases Dashboard is hosted at: detroitmi.gov/healthUPDATE* July 29 2021:The underlying calculation for disease date was updated to allow for individuals to appear on the curve in multiple locations if they experienced more than one case of COVID-19 that was at least 90 days apart.Geospatial information analysis was also improved and additional criterial for address clean up were implemented, which leads to more accurate case counts within Zip Codes. Some unverified addresses that may have appeared in previous Zip Code counts are now excluded.This change discourages direct comparison of dashboard visualizations and counts prior to the new calculation, and non-significant shifts in numbers will be noticed.Case numbers represent Detroit residents only. Some ZIP codes with very low case counts are excluded to protect privacy. Case counts are totals per ZIP code and are not adjusted for population. ZIP code totals are preliminary; addresses are updated as new information becomes available and counts are subject to change. Not all cases have an accurate location; only cases with a known ZIP code are represented. Where a ZIP code is split between cities, only the Detroit portion is shown (48203, 48211, 48212, 48236, 48239). The counts exclude cases among prisoners at the Wayne County Jail and known hospital or laboratory locations.ZIP_Code: The USPS ZIP postal code Clipped_ZIP_Population: The 2010 population of the ZIP code, clipped to include Detroit City residents only.ZIP_Case_Count: The current cumulative count of Confirmed COVID cases within the ZIP code, since the beginning of the pandemic. (Have a "Confimed" case status in MDSS)ZIP_Death_Count: The current cumulative count of Confirmed COVID cases within the ZIP code, since the beginning of the pandemic. (Have a "Confimed" case status in MDSS and are deceased)ZIP_Case_Rate: Rate of confirmed cases per 100 thousand residents in the ZIP code. For each zip, the rate was calculated by (C/P)*100000 C = the count of confirmed (MDSS case status = Confirmed) cases with a resident address in the ZIP code P = the population count of the ZIP codeZIP_Death_Rate: Rate of confirmed cases that were marked deceased, per 100 thousand residents in the ZIP code. For each zip, the rate was calculated by (D/P)*100000 D = the count of confirmed (MDSS case status = Confirmed) cases marked as deceased, with a resident address in the ZIP P = the population count of the ZIP code

Context

From World Health Organization - On 31 December 2019, WHO was alerted to several cases of pneumonia in Wuhan City, Hubei Province of China. The virus did not match any other known virus. This raised concern because when a virus is new, we do not know how it affects people.

So daily level information on the affected people can give some interesting insights when it is made available to the broader data science community.

The European CDC publishes daily statistics on the COVID-19 pandemic. Not just for Europe, but for the entire world. We rely on the ECDC as they collect and harmonize data from around the world which allows us to compare what is happening in different countries.

Content

This dataset has daily level information on the number of affected cases, deaths and recovery etc. from coronavirus. It also contains various other parameters like average life expectancy, population density, smocking population etc. which users can find useful in further prediction that they need to make.

The data is available from 31 Dec,2019.

Inspiration

Give people weekly data so that they can use it to make accurate predictions.

Florida COVID-19 Cases by County exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2020. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/ . https://doi.org/10.5038/USF-COVID-19-GISLive FDOH DataSource: https://services1.arcgis.com/CY1LXxl9zlJeBuRZ/arcgis/rest/services/Florida_COVID19_Cases/FeatureServerFor data 5/10/2020 or after: Archived data was exported directly from the live FDOH layer into the archive. For data prior to 5/10/2020: Data was exported by the University of South Florida - Digital Heritage and Humanities Collection using ArcGIS Pro Software. Data was then converted to shapefile and csv and uploaded into ArcGIS Online archive. Up until 3/25 the FDOH Cases by County layer was updated twice a day, archives are taken from the 11AM update.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from FDOH.Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results. All PUIs fit into one of three residency types: 1. Florida residents tested in Florida2. Non-Florida residents tested in Florida3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outside of Florida, and were not exposed/infectious in Florida.Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state. Total Cases: The total (sum) number of Persons Under Investigation (PUI) who tested positive for COVID-19 while in Florida, as well as Florida residents who tested positive or were exposed/contagious while outside of Florida, and out-of-state residents who were exposed, contagious and/or tested in Florida.Deaths: The Deaths by Day chart shows the total number of Florida residents with confirmed COVID-19 that died on each calendar day (12:00 AM - 11:59 PM). Caution should be used in interpreting recent trends, as deaths are added as they are reported to the Department. Death data often has significant delays in reporting, so data within the past two weeks will be updated frequently.Prefix guide: "PUI" = PUI: Persons under surveillance (any person for which we have data about)"T_ " = Testing: Testing information for all PUIs and cases."C_" = Cases only: Information about cases, which are those persons who have COVID-19 positive test results on file“W_” = Surveillance and syndromic dataKey Data about Testing:T_negative : Testing: Total negative persons tested for all Florida and non-Florida residents, including Florida residents tested outside of the state, and those tested at private facilities.T_positive : Testing: Total positive persons tested for all Florida and non-Florida resident types, including Florida residents tested outside of the state, and those tested at private facilities.PUILab_Yes : All persons tested with lab results on file, including negative, positive and inconclusive. This total does NOT include those who are waiting to be tested or have submitted tests to labs for which results are still pending.Key Data about Confirmed COVID-19 Positive Cases: CasesAll: Cases only: The sum total of all positive cases, including Florida residents in Florida, Florida residents outside Florida, and non-Florida residents in FloridaFLResDeaths: Deaths of Florida ResidentsC_Hosp_Yes : Cases (confirmed positive) with a hospital admission notedC_AgeRange Cases Only: Age range for all cases, regardless of residency typeC_AgeMedian: Cases Only: Median range for all cases, regardless of residency typeC_AllResTypes : Cases Only: Sum of COVID-19 positive Florida Residents; includes in and out of state Florida residents, but does not include out-of-state residents who were treated/tested/isolated in Florida. All questions regarding this dataset should be directed to the Florida Department of Health.

Taiwan recorded 7917 Coronavirus Deaths since the epidemic began, according to the World Health Organization (WHO). In addition, Taiwan reported 4189929 Coronavirus Cases. This dataset includes a chart with historical data for Taiwan Coronavirus Deaths.

Florida COVID-19 Cases by County exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2020. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/ . https://doi.org/10.5038/USF-COVID-19-GISLive FDOH DataSource: https://services1.arcgis.com/CY1LXxl9zlJeBuRZ/arcgis/rest/services/Florida_COVID19_Cases/FeatureServerFor data 5/10/2020 or after: Archived data was exported directly from the live FDOH layer into the archive. For data prior to 5/10/2020: Data was exported by the University of South Florida - Digital Heritage and Humanities Collection using ArcGIS Pro Software. Data was then converted to shapefile and csv and uploaded into ArcGIS Online archive. Up until 3/25 the FDOH Cases by County layer was updated twice a day, archives are taken from the 11AM update.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from FDOH.Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results. All PUIs fit into one of three residency types: 1. Florida residents tested in Florida2. Non-Florida residents tested in Florida3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outside of Florida, and were not exposed/infectious in Florida.Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state. Total Cases: The total (sum) number of Persons Under Investigation (PUI) who tested positive for COVID-19 while in Florida, as well as Florida residents who tested positive or were exposed/contagious while outside of Florida, and out-of-state residents who were exposed, contagious and/or tested in Florida.Deaths: The Deaths by Day chart shows the total number of Florida residents with confirmed COVID-19 that died on each calendar day (12:00 AM - 11:59 PM). Caution should be used in interpreting recent trends, as deaths are added as they are reported to the Department. Death data often has significant delays in reporting, so data within the past two weeks will be updated frequently.Prefix guide: "PUI" = PUI: Persons under surveillance (any person for which we have data about)"T_ " = Testing: Testing information for all PUIs and cases."C_" = Cases only: Information about cases, which are those persons who have COVID-19 positive test results on file“W_” = Surveillance and syndromic dataKey Data about Testing:T_negative : Testing: Total negative persons tested for all Florida and non-Florida residents, including Florida residents tested outside of the state, and those tested at private facilities.T_positive : Testing: Total positive persons tested for all Florida and non-Florida resident types, including Florida residents tested outside of the state, and those tested at private facilities.PUILab_Yes : All persons tested with lab results on file, including negative, positive and inconclusive. This total does NOT include those who are waiting to be tested or have submitted tests to labs for which results are still pending.Key Data about Confirmed COVID-19 Positive Cases: CasesAll: Cases only: The sum total of all positive cases, including Florida residents in Florida, Florida residents outside Florida, and non-Florida residents in FloridaFLResDeaths: Deaths of Florida ResidentsC_Hosp_Yes : Cases (confirmed positive) with a hospital admission notedC_AgeRange Cases Only: Age range for all cases, regardless of residency typeC_AgeMedian: Cases Only: Median range for all cases, regardless of residency typeC_AllResTypes : Cases Only: Sum of COVID-19 positive Florida Residents; includes in and out of state Florida residents, but does not include out-of-state residents who were treated/tested/isolated in Florida. All questions regarding this dataset should be directed to the Florida Department of Health.

Context

A novel Coronavirus found its First case in December 2019, and after that, coronavirus cases are increasing with each subsequent day. As we all know, many people have lost their lives in the first wave of COVID-19, and the number of Deaths increased in the 2nd Wave of COVID-19.

COVID-19 is commonly mild and self-limiting, but in a considerable portion of patients the disease is severe and fatal. Determining which patients are at high risk of severe illness or mortality is essential for appropriate clinical decision-making.

Content

The data file contains information on demographics, comorbidities, admission laboratory values, admission medications, admission supplemental oxygen orders, discharge, and mortality. The data were derived from a healthcare surveillance software package (Clinical Looking Glass [CLG]; Streamline Health, Atlanta, Georgia) and review of the primary medical records. The data relate to COVID-19 patients admitted to a single healthcare system, over a specific period of time, and separated into the 1st 3 weeks of the pandemic and the 2nd 3 weeks of the pandemic. Some of the variables included in the dataset are: length of hospital stay (LOS), myocardial infraction (MI), peripheral vascular disease (PVD), congestive heart failure (CHF), cardiovascular disease (CVD), dementia (Dement), Chronic obstructive pulmonary disease (COPD), diabetes mellitus simple (DM simple), diabetes mellitus complicated (DM complicated), oxygen saturation (OsSats), mean arterial pressure, in mmHg (MAP), D-dimer, in mg/ml (Ddimer), platelets, in k per mm3 (Plts), international normalized ratio (INR), blood urea nitrogen, in mg/dL (BUN), alanine aminotransferase, in U/liter (AST), while blood cells, in per mm3 (WBC) and interleukin-6, in pg/ml (IL-6).

Acknowledgements

I would like to Thanks Scientific Reports for the study on Covid-19 patients.

Inspiration

This Dataset can help in predicting the Mortality Risk or Severe Covid-19 Patients in the Early Stages when they just get admitted into the hospital. By early prediction of Severe covid-19 patients it can help overburdened hospitals to arrange the resources like Oxygen cylinders and ICU beds accordingly which can save the life of patient.

Florida COVID-19 Cases by County exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2020. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/ . https://doi.org/10.5038/USF-COVID-19-GISLive FDOH DataSource: https://services1.arcgis.com/CY1LXxl9zlJeBuRZ/arcgis/rest/services/Florida_COVID19_Cases/FeatureServerFor data 5/10/2020 or after: Archived data was exported directly from the live FDOH layer into the archive. For data prior to 5/10/2020: Data was exported by the University of South Florida - Digital Heritage and Humanities Collection using ArcGIS Pro Software. Data was then converted to shapefile and csv and uploaded into ArcGIS Online archive. Up until 3/25 the FDOH Cases by County layer was updated twice a day, archives are taken from the 11AM update.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from FDOH.Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results. All PUIs fit into one of three residency types: 1. Florida residents tested in Florida2. Non-Florida residents tested in Florida3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outside of Florida, and were not exposed/infectious in Florida.Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state. Total Cases: The total (sum) number of Persons Under Investigation (PUI) who tested positive for COVID-19 while in Florida, as well as Florida residents who tested positive or were exposed/contagious while outside of Florida, and out-of-state residents who were exposed, contagious and/or tested in Florida.Deaths: The Deaths by Day chart shows the total number of Florida residents with confirmed COVID-19 that died on each calendar day (12:00 AM - 11:59 PM). Caution should be used in interpreting recent trends, as deaths are added as they are reported to the Department. Death data often has significant delays in reporting, so data within the past two weeks will be updated frequently.Prefix guide: "PUI" = PUI: Persons under surveillance (any person for which we have data about)"T_ " = Testing: Testing information for all PUIs and cases."C_" = Cases only: Information about cases, which are those persons who have COVID-19 positive test results on file“W_” = Surveillance and syndromic dataKey Data about Testing:T_negative : Testing: Total negative persons tested for all Florida and non-Florida residents, including Florida residents tested outside of the state, and those tested at private facilities.T_positive : Testing: Total positive persons tested for all Florida and non-Florida resident types, including Florida residents tested outside of the state, and those tested at private facilities.PUILab_Yes : All persons tested with lab results on file, including negative, positive and inconclusive. This total does NOT include those who are waiting to be tested or have submitted tests to labs for which results are still pending.Key Data about Confirmed COVID-19 Positive Cases: CasesAll: Cases only: The sum total of all positive cases, including Florida residents in Florida, Florida residents outside Florida, and non-Florida residents in FloridaFLResDeaths: Deaths of Florida ResidentsC_Hosp_Yes : Cases (confirmed positive) with a hospital admission notedC_AgeRange Cases Only: Age range for all cases, regardless of residency typeC_AgeMedian: Cases Only: Median range for all cases, regardless of residency typeC_AllResTypes : Cases Only: Sum of COVID-19 positive Florida Residents; includes in and out of state Florida residents, but does not include out-of-state residents who were treated/tested/isolated in Florida. All questions regarding this dataset should be directed to the Florida Department of Health.

Florida COVID-19 Cases by County exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2020. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/ . https://doi.org/10.5038/USF-COVID-19-GISLive FDOH DataSource: https://services1.arcgis.com/CY1LXxl9zlJeBuRZ/arcgis/rest/services/Florida_COVID19_Cases/FeatureServerFor data 5/10/2020 or after: Archived data was exported directly from the live FDOH layer into the archive. For data prior to 5/10/2020: Data was exported by the University of South Florida - Digital Heritage and Humanities Collection using ArcGIS Pro Software. Data was then converted to shapefile and csv and uploaded into ArcGIS Online archive. Up until 3/25 the FDOH Cases by County layer was updated twice a day, archives are taken from the 11AM update.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from FDOH.Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results. All PUIs fit into one of three residency types: 1. Florida residents tested in Florida2. Non-Florida residents tested in Florida3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outside of Florida, and were not exposed/infectious in Florida.Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state. Total Cases: The total (sum) number of Persons Under Investigation (PUI) who tested positive for COVID-19 while in Florida, as well as Florida residents who tested positive or were exposed/contagious while outside of Florida, and out-of-state residents who were exposed, contagious and/or tested in Florida.Deaths: The Deaths by Day chart shows the total number of Florida residents with confirmed COVID-19 that died on each calendar day (12:00 AM - 11:59 PM). Caution should be used in interpreting recent trends, as deaths are added as they are reported to the Department. Death data often has significant delays in reporting, so data within the past two weeks will be updated frequently.Prefix guide: "PUI" = PUI: Persons under surveillance (any person for which we have data about)"T_ " = Testing: Testing information for all PUIs and cases."C_" = Cases only: Information about cases, which are those persons who have COVID-19 positive test results on file“W_” = Surveillance and syndromic dataKey Data about Testing:T_negative : Testing: Total negative persons tested for all Florida and non-Florida residents, including Florida residents tested outside of the state, and those tested at private facilities.T_positive : Testing: Total positive persons tested for all Florida and non-Florida resident types, including Florida residents tested outside of the state, and those tested at private facilities.PUILab_Yes : All persons tested with lab results on file, including negative, positive and inconclusive. This total does NOT include those who are waiting to be tested or have submitted tests to labs for which results are still pending.Key Data about Confirmed COVID-19 Positive Cases: CasesAll: Cases only: The sum total of all positive cases, including Florida residents in Florida, Florida residents outside Florida, and non-Florida residents in FloridaFLResDeaths: Deaths of Florida ResidentsC_Hosp_Yes : Cases (confirmed positive) with a hospital admission notedC_AgeRange Cases Only: Age range for all cases, regardless of residency typeC_AgeMedian: Cases Only: Median range for all cases, regardless of residency typeC_AllResTypes : Cases Only: Sum of COVID-19 positive Florida Residents; includes in and out of state Florida residents, but does not include out-of-state residents who were treated/tested/isolated in Florida. All questions regarding this dataset should be directed to the Florida Department of Health.

Florida COVID-19 Case Line data, exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu. Starting on 4/6/2021, the Florida Department of Health (FDOH) changed the way they provide COVID-19 caseline data. Beginning with this date the caseline data is being archived as two separate files, one for 2020 and one for 2021. The 2021 file will only include data from 1/1/2021 onward. In addition, FDOH has added two Object ID fields to their dataset. These caseline data are being preserved as they are provided by the FDOH, with a daily archive captured by the USF Libraries DHHC.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2021. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/. https://doi.org/10.5038/USF-COVID-19-GISLive FDOH Data Source: https://www.arcgis.com/home/item.html?id=7a0c74a551904761812dc6b8bd620ee1 or Direct Download at: https://open-fdoh.hub.arcgis.com/datasets/7a0c74a551904761812dc6b8bd620ee1_0.

Archives for this data layer begin on 5/11/2020. Archived data was exported directly from the live FDOH layer into the archive by the University of South Florida Libraries - Digital Heritage and Humanities Collection.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from the Florida Department of Health. This data table represents all laboratory-confirmed cases of COVID-19 in Florida tabulated from the previous day's totals by the Florida Department of Health. Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results.All PUIs fit into one of three residency types:1. Florida residents tested in Florida2. Non-Florida residents tested in Florida 3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outsideof Florida, and were not exposed/infectious in Florida. Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state.Table Guide for Records of Confirmed Positive Cases of COVID-19"County": The Florida county where the individual with COVID-19's case has been processed. "Jurisdiction" of the case:"FL resident" -- a resident of Florida"Non-FL resident" -- someone who resides outside of Florida "Travel_Related": Whether or not the positive case of COVID-19 is designated as related to recent travel by the individual. "No" -- Case designated as not being a risk related to recent travel"Unknown" -- Case designated where a travel-related designation has not yet been made."Yes" -- Case is designated as travel-related for a person who recently traveled overseas or to an area with community"Origin": Where the person likely contracted the virus before arriving / returning to Florida."EDvisit": Whether or not an individual who tested positive for coronavirus visited and was admitted to an Emergency Department related to health conditions surrounding COVID-19."No" -- Individual was not admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19"Unknown" -- It is unknown whether the individual was admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19"Yes" -- Individual was admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19“Hospitalized”: Whether or not a patient who receives a positive laboratory confirmed test for COVID-19 receives inpatient care at a hospital at any time during illness. These people may no longer be hospitalized. This information does not indicate that a COVID-19 positive person is currently hospitalized, only that they have been hospitalized for health conditions relating to COVID-19 at some point during their illness. "No" -- Individual was not admitted for inpatient care at a hospital at any time during illness "Unknown" -- It is unknown whether the individual was admitted for inpatient care at a hospital at any time during illness "Yes" -- Individual was admitted for inpatient care at a hospital at some point during the illness "Died": Whether or not the individual who tested positive for COVID-19 died as a result of health complications from the viral infection. "NA" -- Not applicable / resident has not died "Yes" -- Individual died of a health complication resulting from COVID-19 "Contact": Whether the person contracted COVID-19 from contact with current or previously confirmedcases."No" -- Case with no known contact with current or previously confirmed cases"Yes" -- Case with known contact with current or previously confirmed cases"Unknown" -- Case where contact with current or previous confirmedcases is not known or under investigation"Case_": The date the positive laboratory result was received in the Department of Health’s database system and became a “confirmed case.” This is not the date a person contracted the virus, became symptomatic, or was treated. Florida does not create a case or count suspected/probable cases in the case counts without a confirmed-positive lab result. "EventDate": When the individual reported likely first experiencing symptoms related to COVID-19. "ChartDate": Also the date the positive laboratory result for an individual was received in the Department ofHealth’s database system and became a recorded, “confirmed case” of COVID-19 in the state. Data definitions updated by the FDOH on 5/13/2020.

Florida COVID-19 Cases by County exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2020. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/ . https://doi.org/10.5038/USF-COVID-19-GISLive FDOH DataSource: https://services1.arcgis.com/CY1LXxl9zlJeBuRZ/arcgis/rest/services/Florida_COVID19_Cases/FeatureServerFor data 5/10/2020 or after: Archived data was exported directly from the live FDOH layer into the archive. For data prior to 5/10/2020: Data was exported by the University of South Florida - Digital Heritage and Humanities Collection using ArcGIS Pro Software. Data was then converted to shapefile and csv and uploaded into ArcGIS Online archive. Up until 3/25 the FDOH Cases by County layer was updated twice a day, archives are taken from the 11AM update.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from FDOH.Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results. All PUIs fit into one of three residency types: 1. Florida residents tested in Florida2. Non-Florida residents tested in Florida3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outside of Florida, and were not exposed/infectious in Florida.Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state. Total Cases: The total (sum) number of Persons Under Investigation (PUI) who tested positive for COVID-19 while in Florida, as well as Florida residents who tested positive or were exposed/contagious while outside of Florida, and out-of-state residents who were exposed, contagious and/or tested in Florida.Deaths: The Deaths by Day chart shows the total number of Florida residents with confirmed COVID-19 that died on each calendar day (12:00 AM - 11:59 PM). Caution should be used in interpreting recent trends, as deaths are added as they are reported to the Department. Death data often has significant delays in reporting, so data within the past two weeks will be updated frequently.Prefix guide: "PUI" = PUI: Persons under surveillance (any person for which we have data about)"T_ " = Testing: Testing information for all PUIs and cases."C_" = Cases only: Information about cases, which are those persons who have COVID-19 positive test results on file“W_” = Surveillance and syndromic dataKey Data about Testing:T_negative : Testing: Total negative persons tested for all Florida and non-Florida residents, including Florida residents tested outside of the state, and those tested at private facilities.T_positive : Testing: Total positive persons tested for all Florida and non-Florida resident types, including Florida residents tested outside of the state, and those tested at private facilities.PUILab_Yes : All persons tested with lab results on file, including negative, positive and inconclusive. This total does NOT include those who are waiting to be tested or have submitted tests to labs for which results are still pending.Key Data about Confirmed COVID-19 Positive Cases: CasesAll: Cases only: The sum total of all positive cases, including Florida residents in Florida, Florida residents outside Florida, and non-Florida residents in FloridaFLResDeaths: Deaths of Florida ResidentsC_Hosp_Yes : Cases (confirmed positive) with a hospital admission notedC_AgeRange Cases Only: Age range for all cases, regardless of residency typeC_AgeMedian: Cases Only: Median range for all cases, regardless of residency typeC_AllResTypes : Cases Only: Sum of COVID-19 positive Florida Residents; includes in and out of state Florida residents, but does not include out-of-state residents who were treated/tested/isolated in Florida. All questions regarding this dataset should be directed to the Florida Department of Health.

Florida COVID-19 Case Line data, exported from the Florida Department of Health GIS Layer on date seen in file name. Archived by the University of South Florida Libraries, Digital Heritage and Humanities Collections. Contact: LibraryGIS@usf.edu. Starting on 4/6/2021, the Florida Department of Health (FDOH) changed the way they provide COVID-19 caseline data. Beginning with this date the caseline data is being archived as two separate files, one for 2020 and one for 2021. The 2021 file will only include data from 1/1/2021 onward. In addition, FDOH has added two Object ID fields to their dataset. These caseline data are being preserved as they are provided by the FDOH, with a daily archive captured by the USF Libraries DHHC.Please Cite Our GIS HUB. If you are a researcher or other utilizing our Florida COVID-19 HUB as a tool or accessing and utilizing the data provided herein, please provide an acknowledgement of such in any publication or re-publication. The following citation is suggested: University of South Florida Libraries, Digital Heritage and Humanities Collections. 2021. Florida COVID-19 Hub. Available at https://covid19-usflibrary.hub.arcgis.com/. https://doi.org/10.5038/USF-COVID-19-GISLive FDOH Data Source: https://www.arcgis.com/home/item.html?id=7a0c74a551904761812dc6b8bd620ee1 or Direct Download at: https://open-fdoh.hub.arcgis.com/datasets/7a0c74a551904761812dc6b8bd620ee1_0.

Archives for this data layer begin on 5/11/2020. Archived data was exported directly from the live FDOH layer into the archive by the University of South Florida Libraries - Digital Heritage and Humanities Collection.For data definitions please visit the following box folder: https://usf.box.com/s/vfjwbczkj73ucj19yvwz53at6v6w614hData definition files names include the relative date they were published. The below information was taken from ancillary documents associated with the original layer from the Florida Department of Health. This data table represents all laboratory-confirmed cases of COVID-19 in Florida tabulated from the previous day's totals by the Florida Department of Health. Persons Under Investigation/Surveillance (PUI):Essentially, PUIs are any person who has been or is waiting to be tested. This includes: persons who are considered high-risk for COVID-19 due to recent travel, contact with a known case, exhibiting symptoms of COVID-19 as determined by a healthcare professional, or some combination thereof. PUI’s also include people who meet laboratory testing criteria based on symptoms and exposure, as well as confirmed cases with positive test results. PUIs include any person who is or was being tested, including those with negative and pending results.All PUIs fit into one of three residency types:1. Florida residents tested in Florida2. Non-Florida residents tested in Florida 3. Florida residents tested outside of Florida Florida Residents Tested Elsewhere: The total number of Florida residents with positive COVID-19 test results who were tested outsideof Florida, and were not exposed/infectious in Florida. Non-Florida Residents Tested in Florida: The total number of people with positive COVID-19 test results who were tested, exposed, and/or infectious while in Florida, but are legal residents of another state.Table Guide for Records of Confirmed Positive Cases of COVID-19"County": The Florida county where the individual with COVID-19's case has been processed. "Jurisdiction" of the case:"FL resident" -- a resident of Florida"Non-FL resident" -- someone who resides outside of Florida "Travel_Related": Whether or not the positive case of COVID-19 is designated as related to recent travel by the individual. "No" -- Case designated as not being a risk related to recent travel"Unknown" -- Case designated where a travel-related designation has not yet been made."Yes" -- Case is designated as travel-related for a person who recently traveled overseas or to an area with community"Origin": Where the person likely contracted the virus before arriving / returning to Florida."EDvisit": Whether or not an individual who tested positive for coronavirus visited and was admitted to an Emergency Department related to health conditions surrounding COVID-19."No" -- Individual was not admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19"Unknown" -- It is unknown whether the individual was admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19"Yes" -- Individual was admitted to an emergency department relating to health conditions surrounding the contraction of COVID-19“Hospitalized”: Whether or not a patient who receives a positive laboratory confirmed test for COVID-19 receives inpatient care at a hospital at any time during illness. These people may no longer be hospitalized. This information does not indicate that a COVID-19 positive person is currently hospitalized, only that they have been hospitalized for health conditions relating to COVID-19 at some point during their illness. "No" -- Individual was not admitted for inpatient care at a hospital at any time during illness "Unknown" -- It is unknown whether the individual was admitted for inpatient care at a hospital at any time during illness "Yes" -- Individual was admitted for inpatient care at a hospital at some point during the illness "Died": Whether or not the individual who tested positive for COVID-19 died as a result of health complications from the viral infection. "NA" -- Not applicable / resident has not died "Yes" -- Individual died of a health complication resulting from COVID-19 "Contact": Whether the person contracted COVID-19 from contact with current or previously confirmedcases."No" -- Case with no known contact with current or previously confirmed cases"Yes" -- Case with known contact with current or previously confirmed cases"Unknown" -- Case where contact with current or previous confirmedcases is not known or under investigation"Case_": The date the positive laboratory result was received in the Department of Health’s database system and became a “confirmed case.” This is not the date a person contracted the virus, became symptomatic, or was treated. Florida does not create a case or count suspected/probable cases in the case counts without a confirmed-positive lab result. "EventDate": When the individual reported likely first experiencing symptoms related to COVID-19. "ChartDate": Also the date the positive laboratory result for an individual was received in the Department ofHealth’s database system and became a recorded, “confirmed case” of COVID-19 in the state. Data definitions updated by the FDOH on 5/13/2020.