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The various performance criteria applied in this analysis include the probability of reaching the ultimate target, the costs, elapsed times and system vulnerability resulting from any intrusion. This Excel file contains all the logical, probabilistic and statistical data entered by a user, and required for the evaluation of the criteria. It also reports the results of all the computations.
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Categorical scatterplots with R for biologists: a step-by-step guide
Benjamin Petre1, Aurore Coince2, Sophien Kamoun1
1 The Sainsbury Laboratory, Norwich, UK; 2 Earlham Institute, Norwich, UK
Weissgerber and colleagues (2015) recently stated that ‘as scientists, we urgently need to change our practices for presenting continuous data in small sample size studies’. They called for more scatterplot and boxplot representations in scientific papers, which ‘allow readers to critically evaluate continuous data’ (Weissgerber et al., 2015). In the Kamoun Lab at The Sainsbury Laboratory, we recently implemented a protocol to generate categorical scatterplots (Petre et al., 2016; Dagdas et al., 2016). Here we describe the three steps of this protocol: 1) formatting of the data set in a .csv file, 2) execution of the R script to generate the graph, and 3) export of the graph as a .pdf file.
Protocol
• Step 1: format the data set as a .csv file. Store the data in a three-column excel file as shown in Powerpoint slide. The first column ‘Replicate’ indicates the biological replicates. In the example, the month and year during which the replicate was performed is indicated. The second column ‘Condition’ indicates the conditions of the experiment (in the example, a wild type and two mutants called A and B). The third column ‘Value’ contains continuous values. Save the Excel file as a .csv file (File -> Save as -> in ‘File Format’, select .csv). This .csv file is the input file to import in R.
• Step 2: execute the R script (see Notes 1 and 2). Copy the script shown in Powerpoint slide and paste it in the R console. Execute the script. In the dialog box, select the input .csv file from step 1. The categorical scatterplot will appear in a separate window. Dots represent the values for each sample; colors indicate replicates. Boxplots are superimposed; black dots indicate outliers.
• Step 3: save the graph as a .pdf file. Shape the window at your convenience and save the graph as a .pdf file (File -> Save as). See Powerpoint slide for an example.
Notes
• Note 1: install the ggplot2 package. The R script requires the package ‘ggplot2’ to be installed. To install it, Packages & Data -> Package Installer -> enter ‘ggplot2’ in the Package Search space and click on ‘Get List’. Select ‘ggplot2’ in the Package column and click on ‘Install Selected’. Install all dependencies as well.
• Note 2: use a log scale for the y-axis. To use a log scale for the y-axis of the graph, use the command line below in place of command line #7 in the script.
replicates
graph + geom_boxplot(outlier.colour='black', colour='black') + geom_jitter(aes(col=Replicate)) + scale_y_log10() + theme_bw()
References
Dagdas YF, Belhaj K, Maqbool A, Chaparro-Garcia A, Pandey P, Petre B, et al. (2016) An effector of the Irish potato famine pathogen antagonizes a host autophagy cargo receptor. eLife 5:e10856.
Petre B, Saunders DGO, Sklenar J, Lorrain C, Krasileva KV, Win J, et al. (2016) Heterologous Expression Screens in Nicotiana benthamiana Identify a Candidate Effector of the Wheat Yellow Rust Pathogen that Associates with Processing Bodies. PLoS ONE 11(2):e0149035
Weissgerber TL, Milic NM, Winham SJ, Garovic VD (2015) Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm. PLoS Biol 13(4):e1002128
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This dataset provides a dynamic Excel model for prioritizing projects based on Feasibility, Impact, and Size.
It visualizes project data on a Bubble Chart that updates automatically when new projects are added.
Use this tool to make data-driven prioritization decisions by identifying which projects are most feasible and high-impact.
Organizations often struggle to compare multiple initiatives objectively.
This matrix helps teams quickly determine which projects to pursue first by visualizing:
Example (partial data):
| Criteria | Project 1 | Project 2 | Project 3 | Project 4 | Project 5 | Project 6 | Project 7 | Project 8 |
|---|---|---|---|---|---|---|---|---|
| Feasibility | 7 | 9 | 5 | 2 | 7 | 2 | 6 | 8 |
| Impact | 8 | 4 | 4 | 6 | 6 | 7 | 7 | 7 |
| Size | 10 | 2 | 3 | 7 | 4 | 4 | 3 | 1 |
| Quadrant | Description | Action |
|---|---|---|
| High Feasibility / High Impact | Quick wins | Top Priority |
| High Impact / Low Feasibility | Valuable but risky | Plan carefully |
| Low Impact / High Feasibility | Easy but minor value | Optional |
| Low Impact / Low Feasibility | Low return | Defer or drop |
Project_Priority_Matrix.xlsx. You can use this for:
- Portfolio management
- Product or feature prioritization
- Strategy planning workshops
Project_Priority_Matrix.xlsxFree for personal and organizational use.
Attribution is appreciated if you share or adapt this file.
Author: [Asjad]
Contact: [m.asjad2000@gmail.com]
Compatible With: Microsoft Excel 2019+ / Office 365
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TwitterExcel spreadsheets by species (4 letter code is abbreviation for genus and species used in study, year 2010 or 2011 is year data collected, SH indicates data for Science Hub, date is date of file preparation). The data in a file are described in a read me file which is the first worksheet in each file. Each row in a species spreadsheet is for one plot (plant). The data themselves are in the data worksheet. One file includes a read me description of the column in the date set for chemical analysis. In this file one row is an herbicide treatment and sample for chemical analysis (if taken). This dataset is associated with the following publication: Olszyk , D., T. Pfleeger, T. Shiroyama, M. Blakely-Smith, E. Lee , and M. Plocher. Plant reproduction is altered by simulated herbicide drift toconstructed plant communities. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. Society of Environmental Toxicology and Chemistry, Pensacola, FL, USA, 36(10): 2799-2813, (2017).
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TwitterThis interactive sales dashboard is designed in Excel for B2C type of Businesses like Dmart, Walmart, Amazon, Shops & Supermarkets, etc. using Slicers, Pivot Tables & Pivot Chart.
The first column is the date of Selling. The second column is the product ID. The third column is quantity. The fourth column is sales types, like direct selling, are purchased by a wholesaler or ordered online. The fifth column is a mode of payment, which is online or in cash. You can update these two as per requirements. The last one is a discount percentage. if you want to offer any discount, you can add it here.
So, basically these are the four sheets mentioned above with different tasks.
However, a sales dashboard enables organizations to visualize their real-time sales data and boost productivity.
A dashboard is a very useful tool that brings together all the data in the forms of charts, graphs, statistics and many more visualizations which lead to data-driven and decision making.
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TwitterThis data set was derived from experimental and numerical studies of sediment transport and the topographic evolution of a coupled river and rive-plume system. Data files are Microsoft Excel format and include data and graphs of experimental topographic cross sections, centerline profiles and numerical model runs used to produce the figures in Chatanantavet and Lamb, 2014. Funding was provided by NSF grant(s): OCE12-33685.
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This data publication is part of the 'P³-Petrophysical Property Database' project, which was developed within the EC funded project IMAGE (Integrated Methods for Advanced Geothermal Exploration, EU grant agreement No. 608553) and consists of a scientific paper, a full report on the database, the database as excel and .csv files and additional tables for a hierarchical classification of the petrography and stratigraphy of the investigated rock samples (see related references). This publication here provides a hierarchical interlinked stratigraphic classification according to the chronostratigraphical units of the international chronostratigraphic chart of the IUGS v2016/04 (Cohen et al. 2013, updated) according to international standardisation. As addition to this IUGS chart, which is also documented in GeoSciML, stratigraphic IDs and parent IDs were included to define the direct relationships between the stratigraphic terms. The P³ database aims at providing easily accessible, peer-reviewed information on physical rock properties relevant for geothermal exploration and reservoir characterization in one single compilation. Collected data include hydraulic, thermophysical and mechanical properties and, in addition, electrical resistivity and magnetic susceptibility. Each measured value is complemented by relevant meta-information such as the corresponding sample location, petrographic description, chronostratigraphic age and, most important, original citation. The original stratigraphic and petrographic descriptions are transferred to standardized catalogues following a hierarchical structure ensuring intercomparability for statistical analysis, of which the stratigraphic catalogue is presented here. These chronostratigraphic units are compiled to ensure that formations of a certain age are connected to the corresponding stratigraphic epoch, period or erathem. Thus, the chronostratigraphic units are directly correlated to each other by their stratigraphic ID and stratigraphic parent ID and can thus be used for interlinked data assessment of the petrophysical properties of samples of an according stratigraphic unit.
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According to Cognitive Market Research, the global Graph Database market size was USD 7.3 billion in 2024 and will expand at a compound annual growth rate (CAGR) of 20.2% from 2024 to 2031. Market Dynamics of Graph Database Market
Key Drivers for Graph Database Market
Increasing demand for solutions with the capability to process low-latency queries-One of the main reasons the Graph Database market is extensively being used all over the globe, to the extent that numerous legacy database providers are endeavoring to assimilate graph database schemas into their main relational database infrastructures. Whereas, in theory, the strategy might save money, it might degrade and slow down the performance of queries run beside the database. A graph database is altering traditional brick-and-mortar trades into digital business powerhouses in terms of digital business activities.
Growing usage of graph database technology to drive the Graph Database market's expansion in the years ahead.
Key Restraints for Graph Database Market
Complex programming and standardization pose a serious threat to the Graph Database industry.
The market also faces significant difficulties related to low-cost clusters.
Introduction of the Graph Database Market
The graph database market has experienced significant growth due to the increasing need for efficient data management and complex relationship mapping in various industries. Unlike traditional relational databases, graph databases excel in handling interconnected data, making them ideal for applications such as social networks, fraud detection, recommendation engines, and supply chain management. Key drivers of this market include the rising adoption of big data analytics, advancements in artificial intelligence, and the proliferation of connected devices. Leading players, such as Neo4j, Amazon Web Services, and Microsoft, continue to innovate, offering scalable and robust graph database solutions. The growing demand for real-time, low-latency data processing capabilities further propels the market's expansion.
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This dataset contains in-air hand-written numbers and shapes data used in the paper:B. Alwaely and C. Abhayaratne, "Graph Spectral Domain Feature Learning With Application to in-Air Hand-Drawn Number and Shape Recognition," in IEEE Access, vol. 7, pp. 159661-159673, 2019, doi: 10.1109/ACCESS.2019.2950643.The dataset contains the following:-Readme.txt- InAirNumberShapeDataset.zip containing-Number Folder (With 2 sub folders for Matlab and Excel)-Shapes Folder (With 2 sub folders for Matlab and Excel)The datasets include the in-air drawn number and shape hand movement path captured by a Kinect sensor. The number sub dataset includes 500 instances per each number 0 to 9, resulting in a total of 5000 number data instances. Similarly, the shape sub dataset also includes 500 instances per each shape for 10 different arbitrary 2D shapes, resulting in a total of 5000 shape instances. The dataset provides X, Y, Z coordinates of the hand movement path data in Matlab (M-file) and Excel formats and their corresponding labels.This dataset creation has received The University of Sheffield ethics approval under application #023005 granted on 19/10/2018.
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These are Excel spreadsheets which include the experimental data from melt experiments along with the proposed source for the Vredenburg Granite magmas. From the spreadsheets the restite composition is determined. Peritectic assemblage entrainment models can be determined by making use of graph functions in the Excel spreadsheet
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Graph and download economic data for Dow Jones Industrial Average (DJIA) from 2015-12-02 to 2025-12-01 about stock market, average, industry, and USA.
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Graph and download economic data for Canadian Dollars to U.S. Dollar Spot Exchange Rate (EXCAUS) from Jan 1971 to Nov 2025 about Canada, exchange rate, currency, rate, and USA.
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The various performance criteria applied in this analysis include the probability of reaching the ultimate target, the costs, elapsed times and system vulnerability resulting from any intrusion. This Excel file contains all the logical, probabilistic and statistical data entered by a user, and required for the evaluation of the criteria. It also reports the results of all the computations.