6 datasets found
  1. DataSheet_1_Persistent but dysfunctional mucosal SARS-CoV-2-specific IgA and...

    • frontiersin.figshare.com
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    Updated Jun 13, 2023
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    Maria Julia Ruiz; Gabriel Siracusano; Andréa Cottignies-Calamarte; Daniela Tudor; Fernando Real; Aiwei Zhu; Claudia Pastori; Claude Capron; Arielle R. Rosenberg; Nigel Temperton; Diego Cantoni; Hanqing Liao; Nicola Ternette; Pierre Moine; Mathieu Godement; Guillaume Geri; Jean-Daniel Chiche; Djillali Annane; Elisabeth Cramer Bordé; Lucia Lopalco; Morgane Bomsel (2023). DataSheet_1_Persistent but dysfunctional mucosal SARS-CoV-2-specific IgA and low lung IL-1β associate with COVID-19 fatal outcome: A cross-sectional analysis.pdf [Dataset]. http://doi.org/10.3389/fimmu.2022.842468.s001
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    pdfAvailable download formats
    Dataset updated
    Jun 13, 2023
    Dataset provided by
    Frontiers Mediahttp://www.frontiersin.org/
    Authors
    Maria Julia Ruiz; Gabriel Siracusano; Andréa Cottignies-Calamarte; Daniela Tudor; Fernando Real; Aiwei Zhu; Claudia Pastori; Claude Capron; Arielle R. Rosenberg; Nigel Temperton; Diego Cantoni; Hanqing Liao; Nicola Ternette; Pierre Moine; Mathieu Godement; Guillaume Geri; Jean-Daniel Chiche; Djillali Annane; Elisabeth Cramer Bordé; Lucia Lopalco; Morgane Bomsel
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    The role of the mucosal pulmonary antibody response in coronavirus disease 2019 (COVID-19) outcome remains unclear. Here, we found that in bronchoalveolar lavage (BAL) samples from 48 patients with severe COVID-19-infected with the ancestral Wuhan virus, mucosal IgG and IgA specific for S1, receptor-binding domain (RBD), S2, and nucleocapsid protein (NP) emerged in BAL containing viruses early in infection and persist after virus elimination, with more IgA than IgG for all antigens tested. Furthermore, spike-IgA and spike-IgG immune complexes were detected in BAL, especially when the lung virus has been cleared. BAL IgG and IgA recognized the four main RBD variants. BAL neutralizing titers were higher early in COVID-19 when virus replicates in the lung than later in infection after viral clearance. Patients with fatal COVID-19, in contrast to survivors, developed higher levels of mucosal spike-specific IgA than IgG but lost neutralizing activities over time and had reduced IL-1β in the lung. Altogether, mucosal spike and NP-specific IgG and S1-specific IgA persisting after lung severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) clearance and low pulmonary IL-1β correlate with COVID-19 fatal outcome. Thus, mucosal SARS-CoV-2-specific antibodies may have adverse functions in addition to protective neutralization.HighlightsMucosal pulmonary antibody response in COVID-19 outcome remains unclear. We show that in severe COVID-19 patients, mucosal pulmonary non-neutralizing SARS-CoV-2 IgA persit after viral clearance in the lung. Furthermore, low lung IL-1β correlate with fatal COVID-19. Altogether, mucosal IgA may exert harmful functions beside protective neutralization.

  2. DataSheet_1_HCoV- and SARS-CoV-2 Cross-Reactive T Cells in CVID...

    • frontiersin.figshare.com
    • datasetcatalog.nlm.nih.gov
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    Updated Jun 6, 2023
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    Sophie Steiner; Franziska Sotzny; Sandra Bauer; Il-Kang Na; Michael Schmueck-Henneresse; Victor M. Corman; Tatjana Schwarz; Christian Drosten; Désirée J. Wendering; Uta Behrends; Hans-Dieter Volk; Carmen Scheibenbogen; Leif G. Hanitsch (2023). DataSheet_1_HCoV- and SARS-CoV-2 Cross-Reactive T Cells in CVID Patients.docx [Dataset]. http://doi.org/10.3389/fimmu.2020.607918.s001
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    docxAvailable download formats
    Dataset updated
    Jun 6, 2023
    Dataset provided by
    Frontiers Mediahttp://www.frontiersin.org/
    Authors
    Sophie Steiner; Franziska Sotzny; Sandra Bauer; Il-Kang Na; Michael Schmueck-Henneresse; Victor M. Corman; Tatjana Schwarz; Christian Drosten; Désirée J. Wendering; Uta Behrends; Hans-Dieter Volk; Carmen Scheibenbogen; Leif G. Hanitsch
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    The inability of patients with CVID to mount specific antibody responses to pathogens has raised concerns on the risk and severity of SARS-CoV-2 infection, but there might be a role for protective T cells in these patients. SARS-CoV-2 reactive T cells have been reported for SARS-CoV-2 unexposed healthy individuals. Until now, there is no data on T cell immunity to SARS-CoV-2 infection in CVID. This study aimed to evaluate reactive T cells to human endemic corona viruses (HCoV) and to study pre-existing SARS-CoV-2 reactive T cells in unexposed CVID patients. We evaluated SARS-CoV-2- and HCoV-229E and –OC43 reactive T cells in response to seven peptide pools, including spike and nucleocapsid (NCAP) proteins, in 11 unexposed CVID, 12 unexposed and 11 post COVID-19 healthy controls (HC). We further characterized reactive T cells by IFNγ, TNFα and IL-2 profiles. SARS-CoV-2 spike-reactive CD4+ T cells were detected in 7 of 11 unexposed CVID patients, albeit with fewer multifunctional (IFNγ/TNFα/IL-2) cells than unexposed HC. CVID patients had no SARS-CoV-2 NCAP reactive CD4+ T cells and less reactive CD8+ cells compared to unexposed HC. We observed a correlation between T cell reactivity against spike of SARS-CoV-2 and HCoVs in unexposed, but not post COVID-19 HC, suggesting cross-reactivity. T cell responses in post COVID-19 HC could be distinguished from unexposed HC by higher frequencies of triple-positive NCAP reactive CD4+ T cells. Taken together, SARS-CoV-2 reactive T cells are detectable in unexposed CVID patients albeit with lower recognition frequencies and polyfunctional potential. Frequencies of triple-functional reactive CD4+ cells might provide a marker to distinguish HCoV cross-reactive from SARS-CoV-2 specific T cell responses. Our data provides evidence, that anti-viral T cell immunity is not relevantly impaired in most CVID patients.

  3. Online restaurant delivery growth worldwide 2019-2020, by country

    • statista.com
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    Statista, Online restaurant delivery growth worldwide 2019-2020, by country [Dataset]. https://www.statista.com/statistics/1238955/digital-restaurant-food-delivery-growth-in-selected-countries-worldwide/
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    Dataset authored and provided by
    Statistahttp://statista.com/
    Area covered
    Worldwide
    Description

    Between 2019 and 2020, the coronavirus (COVID-19) pandemic led to a growth in the use of digital restaurant delivery services across ** countries worldwide. Digital delivery services are defined as meals or snacks ordered via mobile app, internet, or text message. In total, digital restaurant delivery increased ** percent globally, with the United States increasing the most at *** percent. Online restaurant delivery market worldwide In 2019, the market size of the global online food delivery sector reached ****** billion U.S. dollars. This figure was forecast to rise to as much as ****** billion by 2023. The sector became especially relevant during the coronavirus (COVID-19) pandemic, where social distancing and hygiene measures caused many restaurants to have to close their doors to the public. At the start of 2020, there was a dramatic decline in sit-down dining worldwide. However, this did not continue throughout the year, with the number of seated diners fluctuating depending on regulations and COVID-19 case numbers. Impact of COVID-19 on U.S. online food delivery The United States saw an increase in digital restaurant food orders between March 2020 and March 2021. Delivery orders increased by *** percent, while carry-out orders increased by *** percent. During that same year, the distribution of digital restaurant food orders was such that carry-out represented ** percent of all digital orders and delivery represented ** percent of all digital orders.

  4. DataSheet_1_Pro- and Anti-Inflammatory Responses in Severe COVID-19-Induced...

    • frontiersin.figshare.com
    docx
    Updated Jun 4, 2023
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    Quirin Notz; Marc Schmalzing; Florian Wedekink; Tobias Schlesinger; Michael Gernert; Johannes Herrmann; Lena Sorger; Dirk Weismann; Benedikt Schmid; Magdalena Sitter; Nicolas Schlegel; Peter Kranke; Jörg Wischhusen; Patrick Meybohm; Christopher Lotz (2023). DataSheet_1_Pro- and Anti-Inflammatory Responses in Severe COVID-19-Induced Acute Respiratory Distress Syndrome—An Observational Pilot Study.docx [Dataset]. http://doi.org/10.3389/fimmu.2020.581338.s001
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    docxAvailable download formats
    Dataset updated
    Jun 4, 2023
    Dataset provided by
    Frontiers Mediahttp://www.frontiersin.org/
    Authors
    Quirin Notz; Marc Schmalzing; Florian Wedekink; Tobias Schlesinger; Michael Gernert; Johannes Herrmann; Lena Sorger; Dirk Weismann; Benedikt Schmid; Magdalena Sitter; Nicolas Schlegel; Peter Kranke; Jörg Wischhusen; Patrick Meybohm; Christopher Lotz
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    ObjectivesThe severity of Coronavirus Disease 2019 (COVID-19) is largely determined by the immune response. First studies indicate altered lymphocyte counts and function. However, interactions of pro- and anti-inflammatory mechanisms remain elusive. In the current study we characterized the immune responses in patients suffering from severe COVID-19-induced acute respiratory distress syndrome (ARDS).MethodsThis was a single-center retrospective study in patients admitted to the intensive care unit (ICU) with confirmed COVID-19 between March 14th and May 28th 2020 (n = 39). Longitudinal data were collected within routine clinical care, including flow-cytometry of lymphocyte subsets, cytokine analysis and growth differentiation factor 15 (GDF-15). Antibody responses against the receptor binding domain (RBD) of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Spike protein were analyzed.ResultsAll patients suffered from severe ARDS, 30.8% died. Interleukin (IL)-6 was massively elevated at every time-point. The anti-inflammatory cytokine IL-10 was concomitantly upregulated with IL-6. The cellular response was characterized by lymphocytopenia with low counts of CD8+ T cells, natural killer (NK) and naïve T helper cells. CD8+ T and NK cells recovered after 8 to 14 days. The B cell system was largely unimpeded. This coincided with a slight increase in anti-SARS-CoV-2-Spike-RBD immunoglobulin (Ig) G and a decrease in anti-SARS-CoV-2-Spike-RBD IgM. GDF-15 levels were elevated throughout ICU treatment.ConclusionsMassively elevated levels of IL-6 and a delayed cytotoxic immune defense characterized severe COVID-19-induced ARDS. The B cell response and antibody production were largely unimpeded. No obvious imbalance of pro- and anti-inflammatory mechanisms was observed, with elevated GDF-15 levels suggesting increased tissue resilience.

  5. Showed chemical structure and molecular docking of ingredients of EGYVIR...

    • figshare.com
    xls
    Updated Jun 7, 2023
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    Wael H. Roshdy; Helmy A. Rashed; Ahmed Kandeil; Ahmed Mostafa; Yassmin Moatasim; Omnia Kutkat; Noura M. Abo Shama; Mokhtar R. Gomaa; Ibrahim H. El-Sayed; Nancy M. El Guindy; Amal Naguib; Ghazi Kayali; Mohamed A. Ali (2023). Showed chemical structure and molecular docking of ingredients of EGYVIR with viral spike RBD, and cellular P50 subunit. [Dataset]. http://doi.org/10.1371/journal.pone.0241739.t002
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    Dataset updated
    Jun 7, 2023
    Dataset provided by
    PLOShttp://plos.org/
    Authors
    Wael H. Roshdy; Helmy A. Rashed; Ahmed Kandeil; Ahmed Mostafa; Yassmin Moatasim; Omnia Kutkat; Noura M. Abo Shama; Mokhtar R. Gomaa; Ibrahim H. El-Sayed; Nancy M. El Guindy; Amal Naguib; Ghazi Kayali; Mohamed A. Ali
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Showed chemical structure and molecular docking of ingredients of EGYVIR with viral spike RBD, and cellular P50 subunit.

  6. Principal-component analysis of inflammatory biomarkers in plasma from...

    • plos.figshare.com
    bin
    Updated Jun 21, 2023
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    Shayane Martins Rodrigues Gomes; Andréia Carolinne de Souza Brito; Wânia Ferraz Pereira Manfro; Marcelo Ribeiro-Alves; Roberto Stefan de Almeida Ribeiro; Mariana Soares da Cal; Vinicius da Cunha Lisboa; Daniel Paiva Barros de Abreu; Leda dos Reis Castilho; Luís Cristóvão de Moares Sobrino Porto; Thiago Thomáz Mafort; Agnaldo José Lopes; Silvia Amaral Gonçalves da Silva; Patrícia Maria Lourenço Dutra; Luciana Silva Rodrigues (2023). Principal-component analysis of inflammatory biomarkers in plasma from patients with COVID-19 and unexposed group. [Dataset]. http://doi.org/10.1371/journal.pone.0283983.t002
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    binAvailable download formats
    Dataset updated
    Jun 21, 2023
    Dataset provided by
    PLOShttp://plos.org/
    Authors
    Shayane Martins Rodrigues Gomes; Andréia Carolinne de Souza Brito; Wânia Ferraz Pereira Manfro; Marcelo Ribeiro-Alves; Roberto Stefan de Almeida Ribeiro; Mariana Soares da Cal; Vinicius da Cunha Lisboa; Daniel Paiva Barros de Abreu; Leda dos Reis Castilho; Luís Cristóvão de Moares Sobrino Porto; Thiago Thomáz Mafort; Agnaldo José Lopes; Silvia Amaral Gonçalves da Silva; Patrícia Maria Lourenço Dutra; Luciana Silva Rodrigues
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Principal-component analysis of inflammatory biomarkers in plasma from patients with COVID-19 and unexposed group.

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Maria Julia Ruiz; Gabriel Siracusano; Andréa Cottignies-Calamarte; Daniela Tudor; Fernando Real; Aiwei Zhu; Claudia Pastori; Claude Capron; Arielle R. Rosenberg; Nigel Temperton; Diego Cantoni; Hanqing Liao; Nicola Ternette; Pierre Moine; Mathieu Godement; Guillaume Geri; Jean-Daniel Chiche; Djillali Annane; Elisabeth Cramer Bordé; Lucia Lopalco; Morgane Bomsel (2023). DataSheet_1_Persistent but dysfunctional mucosal SARS-CoV-2-specific IgA and low lung IL-1β associate with COVID-19 fatal outcome: A cross-sectional analysis.pdf [Dataset]. http://doi.org/10.3389/fimmu.2022.842468.s001
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DataSheet_1_Persistent but dysfunctional mucosal SARS-CoV-2-specific IgA and low lung IL-1β associate with COVID-19 fatal outcome: A cross-sectional analysis.pdf

Related Article
Explore at:
pdfAvailable download formats
Dataset updated
Jun 13, 2023
Dataset provided by
Frontiers Mediahttp://www.frontiersin.org/
Authors
Maria Julia Ruiz; Gabriel Siracusano; Andréa Cottignies-Calamarte; Daniela Tudor; Fernando Real; Aiwei Zhu; Claudia Pastori; Claude Capron; Arielle R. Rosenberg; Nigel Temperton; Diego Cantoni; Hanqing Liao; Nicola Ternette; Pierre Moine; Mathieu Godement; Guillaume Geri; Jean-Daniel Chiche; Djillali Annane; Elisabeth Cramer Bordé; Lucia Lopalco; Morgane Bomsel
License

Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically

Description

The role of the mucosal pulmonary antibody response in coronavirus disease 2019 (COVID-19) outcome remains unclear. Here, we found that in bronchoalveolar lavage (BAL) samples from 48 patients with severe COVID-19-infected with the ancestral Wuhan virus, mucosal IgG and IgA specific for S1, receptor-binding domain (RBD), S2, and nucleocapsid protein (NP) emerged in BAL containing viruses early in infection and persist after virus elimination, with more IgA than IgG for all antigens tested. Furthermore, spike-IgA and spike-IgG immune complexes were detected in BAL, especially when the lung virus has been cleared. BAL IgG and IgA recognized the four main RBD variants. BAL neutralizing titers were higher early in COVID-19 when virus replicates in the lung than later in infection after viral clearance. Patients with fatal COVID-19, in contrast to survivors, developed higher levels of mucosal spike-specific IgA than IgG but lost neutralizing activities over time and had reduced IL-1β in the lung. Altogether, mucosal spike and NP-specific IgG and S1-specific IgA persisting after lung severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) clearance and low pulmonary IL-1β correlate with COVID-19 fatal outcome. Thus, mucosal SARS-CoV-2-specific antibodies may have adverse functions in addition to protective neutralization.HighlightsMucosal pulmonary antibody response in COVID-19 outcome remains unclear. We show that in severe COVID-19 patients, mucosal pulmonary non-neutralizing SARS-CoV-2 IgA persit after viral clearance in the lung. Furthermore, low lung IL-1β correlate with fatal COVID-19. Altogether, mucosal IgA may exert harmful functions beside protective neutralization.

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