Have you ever wanted to create your own maps, or integrate and visualize spatial datasets to examine changes in trends between locations and over time? Follow along with these training tutorials on QGIS, an open source geographic information system (GIS) and learn key concepts, procedures and skills for performing common GIS tasks – such as creating maps, as well as joining, overlaying and visualizing spatial datasets. These tutorials are geared towards new GIS users. We’ll start with foundational concepts, and build towards more advanced topics throughout – demonstrating how with a few relatively easy steps you can get quite a lot out of GIS. You can then extend these skills to datasets of thematic relevance to you in addressing tasks faced in your day-to-day work.

This is a link to the QGIS website where you can download open-source GIS software for viewing, analyzing and manipulating geodata like our downloadable shapefiles.

The Digital Geomorphic-GIS Map of Gulf Islands National Seashore (5-meter accuracy and 1-foot resolution 2006-2007 mapping), Mississippi and Florida is composed of GIS data layers and GIS tables, and is available in the following GRI-supported GIS data formats: 1.) a 10.1 file geodatabase (guis_geomorphology.gdb), a 2.) Open Geospatial Consortium (OGC) geopackage, and 3.) 2.2 KMZ/KML file for use in Google Earth, however, this format version of the map is limited in data layers presented and in access to GRI ancillary table information. The file geodatabase format is supported with a 1.) ArcGIS Pro map file (.mapx) file (guis_geomorphology.mapx) and individual Pro layer (.lyrx) files (for each GIS data layer), as well as with a 2.) 10.1 ArcMap (.mxd) map document (guis_geomorphology.mxd) and individual 10.1 layer (.lyr) files (for each GIS data layer). The OGC geopackage is supported with a QGIS project (.qgz) file. Upon request, the GIS data is also available in ESRI 10.1 shapefile format. Contact Stephanie O'Meara (see contact information below) to acquire the GIS data in these GIS data formats. In addition to the GIS data and supporting GIS files, three additional files comprise a GRI digital geologic-GIS dataset or map: 1.) A GIS readme file (guis_geology_gis_readme.pdf), 2.) the GRI ancillary map information document (.pdf) file (guis_geomorphology.pdf) which contains geologic unit descriptions, as well as other ancillary map information and graphics from the source map(s) used by the GRI in the production of the GRI digital geologic-GIS data for the park, and 3.) a user-friendly FAQ PDF version of the metadata (guis_geomorphology_metadata_faq.pdf). Please read the guis_geology_gis_readme.pdf for information pertaining to the proper extraction of the GIS data and other map files. Google Earth software is available for free at: https://www.google.com/earth/versions/. QGIS software is available for free at: https://www.qgis.org/en/site/. Users are encouraged to only use the Google Earth data for basic visualization, and to use the GIS data for any type of data analysis or investigation. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). For a complete listing of GRI products visit the GRI publications webpage: For a complete listing of GRI products visit the GRI publications webpage: https://www.nps.gov/subjects/geology/geologic-resources-inventory-products.htm. For more information about the Geologic Resources Inventory Program visit the GRI webpage: https://www.nps.gov/subjects/geology/gri,htm. At the bottom of that webpage is a "Contact Us" link if you need additional information. You may also directly contact the program coordinator, Jason Kenworthy (jason_kenworthy@nps.gov). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: U.S. Geological Survey. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (guis_geomorphology_metadata.txt or guis_geomorphology_metadata_faq.pdf). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:26,000 and United States National Map Accuracy Standards features are within (horizontally) 13.2 meters or 43.3 feet of their actual location as presented by this dataset. Users of this data should thus not assume the location of features is exactly where they are portrayed in Google Earth, ArcGIS, QGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: https://www.nps.gov/articles/gri-geodatabase-model.htm).

QGIS is a Free and Open Source Geographic Information System. This dataset contains all the information to get you started.

In this blog I’ll share the workflow and tools used in the GIS part of this analysis. To understand where crashes are occurring, first the dataset had to be mapped. The software of choice in this instance was ArcGIS, though most of the analysis could have been done using QGIS. Heat maps are all the rage, and if you want to make simple heat maps for free and you appreciate good documentation, I recommend the QGIS Heatmap plugin. There are also some great tools in the free open-source program GeoDa for spatial statistics.

QGIS 3 map of Eaton County, Michigan, USA with:ParcelsBuilding FootprintsSite Address PointsPolling PlacesCounty DistrictsControl CornersTownshipsSectionsGeopolitical AreasRoadsFlowlinesCounty DrainsWaterbodiesCountyAerial 2015 map service * The data in the map is stored in a geopackage called "geodata.gpkg" which should be kept in the same folder as the map "OpenData.qgz" in order to maintain the map's connectivity to the data sources. You will need the free GIS software QGIS installed to view this map. It's available at https://qgis.org

This dataset contains open vector data for railways, forests and power lines, as well an open digital elevation model (DEM) for a small area around a sample forest range in Europe (Germany, Upper Bavaria, Kochel Forest Range, some 70 km south of München, at the edge of Bavarian Alps). The purpose of this dataset is to provide a documented sample dataset in order to demonstrate geospatial preprocessing at FOSS4G2019 based on open data and software. This sample has been produced based on several existing open data sources (detailed below), therefore documenting the sources for obtaining some data needed for computations related to forest accessibility and wood harvesting. For example, they can be used with the open methodology and QGIS plugin Seilaplan for optimising the geometric layout cable roads or with additional open software for computing the forest accessibility for wood harvesting. The vector data (railways, forests and power lines) was extracted from OpenStreetMap (data copyrighted OpenStreetMap contributors and available from https://www.openstreetmap.org). The railways and forests were downloaded and extracted on 18.05.2019 using the open sources QGIS (https://www.qgis.org) with the QuickOSM plugin, while the power lines were downloaded a couple of days later on 23.05.2019.

Additional notes for vector data: Please note that OpenStreeMap data extracts such as forests, roads and railways (except power lines) can also be downloaded in a GIS friendly format (Shapefile) from http://download.geofabrik.de/ or using the QGIS built-in download function for OpenStreetMap data. The most efficient way to retrieve specific OSM tags (such as power=line) is to use the QuickOSM plugin for QGIS (using the Overpass API - https://wiki.openstreetmap.org/wiki/Overpass_API) or directly using overpass turbo (https://overpass-turbo.eu/). Finally, the digitised perimeter of the sample forest range is also made available for reproducibility purposes, although any perimeter or area can be digitised freely using the QGIS editing toolbar.

The DEM was originally adapted and modified also with QGIS (https://www.qgis.org) based on the elevation data available from two different sources, by reprojecting and downsampling datasets to 25m then selecting, for each individual raster cell, the elevation value that was closer to the average. These two different elevation sources are:

• Copernicus Land Monitoring Service - EU-DEM v.1.1 (TILE ID E40N20, downloaded from https://land.copernicus.eu/imagery-in-situ/eu-dem/eu-dem-v1.1; this original DEM was produced by the Copernicus Land Monitoring Service “with funding by the European Union” based on SRTM and ASTER GDEM)
• Digitales Geländemodell 50 m Gitterweite (https://opendata.bayern.de/detailansicht/datensatz/digitales-gelaendemodell-50-m-gitterweite/), produced by the Bayerische Vermessungsverwaltung – www.geodaten.bayern.de –and downloaded from http://www.geodaten.bayern.de/opendata/DGM50/dgm50_epsg4258.tif

This methodology was chosen as a way of performing a basic quality check, by comparing the EU-DEM v.1.1 derived from globally available DEM data (such as SRTM) with more authoritative data for the randomly selected region, since using authoritative data is preferred (if open and available). For other sample regions, where authoritative open data is not available, such comparisons cannot longer be performed.

Additional notes DEM: a very good DEM open data source for Germany is the open data set collected and resampled by Sonny (sonnyy7@gmail.com) and made available on the Austrian Open Data Portal http://data.opendataportal.at/dataset/dtm-germany. In order to simplify end-to-end reproducibility of the paper planned for FOSS4G2019, we use and distribute an adapted (reprojected and resampled to 25 meters) sample of the above mentioned dataset for the selected forest range.

This sample dataset is accompanied by software in Python, as a Jupiter Notebook that generates harmonized output rasters with the same extent from the input data. The extent is given by the polygon vector dataset (Perimeter). These output rasters, such as obstacles, aspect, slope, forest cover, can serve as input data for later computations related to forest accessibility and wood harvesting questions. The obstacles output is obtained by transforming line vector datasets (railway lines, high voltage power lines) to raster. Aspect and slope are both derived from the sample digital elevation model.

This dataset includes a series of R scripts required to carry out some of the practical exercises in the book “Land Use Cover Datasets and Validation Tools”, available in open access.

The scripts have been designed within the context of the R Processing Provider, a plugin that integrates the R processing environment into QGIS. For all the information about how to use these scripts in QGIS, please refer to Chapter 1 of the book referred to above.

The dataset includes 15 different scripts, which can implement the calculation of different metrics in QGIS:

• Change statistics such as absolute change, relative change and annual rate of change (Change_Statistics.rsx)
• Areal and spatial agreement metrics, either overall (Overall Areal Inconsistency.rsx, Overall Spatial Agreement.rsx, Overall Spatial Inconsistency.rsx) or per category (Individual Areal Inconsistency.rsx, Individual Spatial Agreement.rsx)
• The four components of change (gross gains, gross losses, net change and swap) proposed by Pontius Jr. (2004) (LUCCBudget.rsx)
• The intensity analysis proposed by Aldwaik and Pontius (2012) (Intensity_analysis.rsx)
• The Flow matrix proposed by Runfola and Pontius (2013) (Stable_change_flow_matrix.rsx, Flow_matrix_graf.rsx)
• Pearson and Spearman correlations (Correlation.rsx)
• The Receiver Operating Characteristic (ROC) (ROCAnalysis.rsx)
• The Goodness of Fit (GOF) calculated using the MapCurves method proposed by Hargrove et al. (2006) (MapCurves_raster.rsx, MapCurves_vector.rsx)
• The spatial distribution of overall, user and producer’s accuracies, obtained through Geographical Weighted Regression methods (Local accuracy assessment statistics.rsx).

Descriptions of all these methods can be found in different chapters of the aforementioned book.

The dataset also includes a readme file listing all the scripts provided, detailing their authors and the references on which their methods are based.

This is a collection of all GPS- and computer-generated geospatial data specific to the Alpine Treeline Warming Experiment (ATWE), located on Niwot Ridge, Colorado, USA. The experiment ran between 2008 and 2016, and consisted of three sites spread across an elevation gradient. Geospatial data for all three experimental sites and cone/seed collection locations are included in this package. ––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––– Geospatial files include cone collection, experimental site, seed trap, and other GPS location/terrain data. File types include ESRI shapefiles, ESRI grid files or Arc/Info binary grids, TIFFs (.tif), and keyhole markup language (.kml) files. Trimble-imported data include plain text files (.txt), Trimble COR (CorelDRAW) files, and Trimble SSF (Standard Storage Format) files. Microsoft Excel (.xlsx) and comma-separated values (.csv) files corresponding to the attribute tables of many files within this package are also included. A complete list of files can be found in this document in the “Data File Organization” section in the included Data User's Guide. Maps are also included in this data package for reference and use. These maps are separated into two categories, 2021 maps and legacy maps, which were made in 2010. Each 2021 map has one copy in portable network graphics (.png) format, and the other in .pdf format. All legacy maps are in .pdf format. .png image files can be opened with any compatible programs, such as Preview (Mac OS) and Photos (Windows). All GIS files were imported into geopackages (.gpkg) using QGIS, and double-checked for compatibility and data/attribute integrity using ESRI ArcGIS Pro. Note that files packaged within geopackages will open in ArcGIS Pro with “main.” preceding each file name, and an extra column named “geom” defining geometry type in the attribute table. The contents of each geospatial file remain intact, unless otherwise stated in “niwot_geospatial_data_list_07012021.pdf/.xlsx”. This list of files can be found as an .xlsx and a .pdf in this archive. As an open-source file format, files within gpkgs (TIFF, shapefiles, ESRI grid or “Arc/Info Binary”) can be read using both QGIS and ArcGIS Pro, and any other geospatial softwares. Text and .csv files can be read using TextEdit/Notepad/any simple text-editing software; .csv’s can also be opened using Microsoft Excel and R. .kml files can be opened using Google Maps or Google Earth, and Trimble files are most compatible with Trimble’s GPS Pathfinder Office software. .xlsx files can be opened using Microsoft Excel. PDFs can be opened using Adobe Acrobat Reader, and any other compatible programs. A selection of original shapefiles within this archive were generated using ArcMap with associated FGDC-standardized metadata (xml file format). We are including these original files because they contain metadata only accessible using ESRI programs at this time, and so that the relationship between shapefiles and xml files is maintained. Individual xml files can be opened (without a GIS-specific program) using TextEdit or Notepad. Since ESRI’s compatibility with FGDC metadata has changed since the generation of these files, many shapefiles will require upgrading to be compatible with ESRI’s latest versions of geospatial software. These details are also noted in the “niwot_geospatial_data_list_07012021” file.

This dataset contains both large (A0) printable maps of the Torres Strait broken into six overlapping regions, based on a clear sky, clear water composite Sentinel 2 composite imagery and the imagery used to create these maps. These maps show satellite imagery of the region, overlaid with reef and island boundaries and names. Not all features are named, just the more prominent features. This also includes a vector map of Ashmore Reef and Boot Reef in Coral Sea as these were used in the same discussions that these maps were developed for. The map of Ashmore Reef includes the atoll platform, reef boundaries and depth polygons for 5 m and 10 m.

This dataset contains all working files used in the development of these maps. This includes all a copy of all the source datasets and all derived satellite image tiles and QGIS files used to create the maps. This includes cloud free Sentinel 2 composite imagery of the Torres Strait region with alpha blended edges to allow the creation of a smooth high resolution basemap of the region.

The base imagery is similar to the older base imagery dataset: Torres Strait clear sky, clear water Landsat 5 satellite composite (NERP TE 13.1 eAtlas, AIMS, source: NASA).

Most of the imagery in the composite imagery from 2017 - 2021.

Method: The Sentinel 2 basemap was produced by processing imagery from the World_AIMS_Marine-satellite-imagery dataset (not yet published) for the Torres Strait region. The TrueColour imagery for the scenes covering the mapped area were downloaded. Both the reference 1 imagery (R1) and reference 2 imagery (R2) was copied for processing. R1 imagery contains the lowest noise, most cloud free imagery, while R2 contains the next best set of imagery. Both R1 and R2 are typically composite images from multiple dates.

The R2 images were selectively blended using manually created masks with the R1 images. This was done to get the best combination of both images and typically resulted in a reduction in some of the cloud artefacts in the R1 images. The mask creation and previewing of the blending was performed in Photoshop. The created masks were saved in 01-data/R2-R1-masks. To help with the blending of neighbouring images a feathered alpha channel was added to the imagery. The processing of the merging (using the masks) and the creation of the feathered borders on the images was performed using a Python script (src/local/03-merge-R2-R1-images.py) using the Pillow library and GDAL. The neighbouring image blending mask was created by applying a blurring of the original hard image mask. This allowed neighbouring image tiles to merge together.

The imagery and reference datasets (reef boundaries, EEZ) were loaded into QGIS for the creation of the printable maps.

To optimise the matching of the resulting map slight brightness adjustments were applied to each scene tile to match its neighbours. This was done in the setup of each image in QGIS. This adjustment was imperfect as each tile was made from a different combinations of days (to remove clouds) resulting in each scene having a different tonal gradients across the scene then its neighbours. Additionally Sentinel 2 has slight stripes (at 13 degrees off the vertical) due to the swath of each sensor having a slight sensitivity difference. This effect was uncorrected in this imagery.

Single merged composite GeoTiff: The image tiles with alpha blended edges work well in QGIS, but not in ArcGIS Pro. To allow this imagery to be used across tools that don't support the alpha blending we merged and flattened the tiles into a single large GeoTiff with no alpha channel. This was done by rendering the map created in QGIS into a single large image. This was done in multiple steps to make the process manageable.

The rendered map was cut into twenty 1 x 1 degree georeferenced PNG images using the Atlas feature of QGIS. This process baked in the alpha blending across neighbouring Sentinel 2 scenes. The PNG images were then merged back into a large GeoTiff image using GDAL (via QGIS), removing the alpha channel. The brightness of the image was adjusted so that the darkest pixels in the image were 1, saving the value 0 for nodata masking and the boundary was clipped, using a polygon boundary, to trim off the outer feathering. The image was then optimised for performance by using internal tiling and adding overviews. A full breakdown of these steps is provided in the README.md in the 'Browse and download all data files' link.

The merged final image is available in export\TS_AIMS_Torres Strait-Sentinel-2_Composite.tif.

Change Log: 2023-03-02: Eric Lawrey Created a merged version of the satellite imagery, with no alpha blending so that it can be used in ArcGIS Pro. It is now a single large GeoTiff image. The Google Earth Engine source code for the World_AIMS_Marine-satellite-imagery was included to improve the reproducibility and provenance of the dataset, along with a calculation of the distribution of image dates that went into the final composite image. A WMS service for the imagery was also setup and linked to from the metadata. A cross reference to the older Torres Strait clear sky clear water Landsat composite imagery was also added to the record.

22 Nov 2023: Eric Lawrey Added the data and maps for close up of Mer. - 01-data/TS_DNRM_Mer-aerial-imagery/ - preview/Torres-Strait-Mer-Map-Landscape-A0.jpeg - exports/Torres-Strait-Mer-Map-Landscape-A0.pdf Updated 02-Torres-Strait-regional-maps.qgz to include the layout for the new map.

Source datasets: Complete Great Barrier Reef (GBR) Island and Reef Feature boundaries including Torres Strait Version 1b (NESP TWQ 3.13, AIMS, TSRA, GBRMPA), https://eatlas.org.au/data/uuid/d2396b2c-68d4-4f4b-aab0-52f7bc4a81f5

Geoscience Australia (2014b), Seas and Submerged Lands Act 1973 - Australian Maritime Boundaries 2014a - Geodatabase [Dataset]. Canberra, Australia: Author. https://creativecommons.org/licenses/by/4.0/ [license]. Sourced on 12 July 2017, https://dx.doi.org/10.4225/25/5539DFE87D895

Basemap/AU_GA_AMB_2014a/Exclusive_Economic_Zone_AMB2014a_Limit.shp The original data was obtained from GA (Geoscience Australia, 2014a). The Geodatabase was loaded in ArcMap. The Exclusive_Economic_Zone_AMB2014a_Limit layer was loaded and exported as a shapefile. Since this file was small no clipping was applied to the data.

Geoscience Australia (2014a), Treaties - Australian Maritime Boundaries (AMB) 2014a [Dataset]. Canberra, Australia: Author. https://creativecommons.org/licenses/by/4.0/ [license]. Sourced on 12 July 2017, http://dx.doi.org/10.4225/25/5539E01878302 Basemap/AU_GA_Treaties-AMB_2014a/Papua_New_Guinea_TSPZ_AMB2014a_Limit.shp The original data was obtained from GA (Geoscience Australia, 2014b). The Geodatabase was loaded in ArcMap. The Papua_New_Guinea_TSPZ_AMB2014a_Limit layer was loaded and exported as a shapefile. Since this file was small no clipping was applied to the data.

AIMS Coral Sea Features (2022) - DRAFT This is a draft version of this dataset. The region for Ashmore and Boot reef was checked. The attributes in these datasets haven't been cleaned up. Note these files should not be considered finalised and are only suitable for maps around Ashmore Reef. Please source an updated version of this dataset for any other purpose. CS_AIMS_Coral-Sea-Features/CS_Names/Names.shp CS_AIMS_Coral-Sea-Features/CS_Platform_adj/CS_Platform.shp CS_AIMS_Coral-Sea-Features/CS_Reef_Boundaries_adj/CS_Reef_Boundaries.shp CS_AIMS_Coral-Sea-Features/CS_Depth/CS_AIMS_Coral-Sea-Features_Img_S2_R1_Depth5m_Coral-Sea.shp CS_AIMS_Coral-Sea-Features/CS_Depth/CS_AIMS_Coral-Sea-Features_Img_S2_R1_Depth10m_Coral-Sea.shp

Murray Island 20 Sept 2011 15cm SISP aerial imagery, Queensland Spatial Imagery Services Program, Department of Resources, Queensland This is the high resolution imagery used to create the map of Mer.

Marine satellite imagery (Sentinel 2 and Landsat 8) (AIMS), https://eatlas.org.au/data/uuid/5d67aa4d-a983-45d0-8cc1-187596fa9c0c - World_AIMS_Marine-satellite-imagery

Data Location: This dataset is filed in the eAtlas enduring data repository at: data\custodian\2020-2029-AIMS\TS_AIMS_Torres-Strait-Sentinel-2-regional-maps. On the eAtlas server it is stored at eAtlas GeoServer\data\2020-2029-AIMS.

This dataset shows the results of mapping the connectivity of key values (natural heritage, indigenous heritage, social and historic and economic) of the Great Barrier Reef with its neighbouring regions (Torres Strait, Coral Sea and Great Sandy Strait). The purpose of this mapping process was to identify values that need joint management across multiple regions. It contains a spreadsheet containing the connection information obtained from expert elicitation, all maps derived from this information and all GIS files needed to recreate these maps. This dataset contains the connection strength for 59 attributes of the values between 7 regions (GBR Far Northern, GBR Cairns-Cooktown, GBR Whitsunday-Townsville, GBR Mackay-Capricorn, Torres Strait, Coral Sea and Great Sandy Strait) based on expert opinion. Each connection is assessed based on its strength, mechanism and confidence. Where a connection was known to not exist between two regions then this was also explicitly recorded. A video tutorial on this dataset and its maps is available from https://vimeo.com/335053846.

Methods:

The information for the connectivity maps was gathered from experts (~30) during a 3-day workshop in August 2017. Experts were provided with a template containing a map of Queensland and the neighbouring seas, with an overlay of the regions of interest to assess the connectivity. These were Torres Strait, GBR:Far North Queensland, GBR:Cairns to Cooktown, GBC: Townsville to Whitsundays, GBR: Mackay to Capricorn Bunkers and Great Sandy Strait (which includes Hervey bay). A range of reference maps showing locations of the values were provided, where this information could be obtained. As well as the map the template provided 7x7 table for filling in the connectivity strength and connection type between all combinations of these regions. The experts self-organised into groups to discuss and complete the template for each attribute to be mapped. Each expert was asked to estimate the strength of connection between each region as well as the connection mechanism and their confidence in the information. Due to the limited workshop time the experts were asked to focus on initially recording the connections between the GBR and its neighbouring regions and not to worry about the internal connections in the GBR, or long-distance connections along the Queensland coast. In the second half of the workshop the experts were asked to review the maps created and expand on the connections to include those internal to the GBR. After the workshop an initial set of maps were produced and reviewed by the project team and a range of issues were identified and resolved. Additional connectivity maps for some attributes were prepared after the workshop by the subject experts within the project team. The data gathered from these templates was translated into a spreadsheet, then processing into the graphic maps using QGIS to present the connectivity information. The following are the value attributes where their connectivity was mapped: Seagrass meadows: pan-regional species (e.g. Halophila spp. and Halodule spp.) Seagrass meadows: tropical/sub-tropical (Cymodocea serrulata, Syringodium isoetifolium) Seagrass meadows: tropical (Thalassia, Cymodocea, Thalassodendron, Enhalus, Rotundata) Seagrass meadows: Zostera muelleri Mangroves & saltmarsh Hard corals Crustose coralline algae Macroalgae Crown of thorns starfish larval flow Acropora larval flow Casuarina equisetifolia & Pandanus tectorius Argusia argentia Pisonia grandis: cay vegetation Inter-reef gardens (sponges + gorgonians) (Incomplete) Halimeda Upwellings Pelagic foraging seabirds Inshore and offshore foraging seabirds Migratory shorebirds Ornate rock lobster Yellowfin tuna Black marlin Spanish mackerel Tiger shark Grey nurse shark Humpback whales Dugongs Green turtles Hawksbill turtles Loggerhead turtles Flatback turtles Longfin & Shortfin Eels Red-spot king prawn Brown tiger prawn Eastern king prawns Great White Shark Sandfish (H. scabra) Black teatfish (H. whitmaei) Location of sea country Tangible cultural resources Location of place attachment Location of historic shipwrecks Location of places of social significance Location of commercial fishing activity Location of recreational use Location of tourism destinations Australian blacktip shark (C. tilstoni) Barramundi Common black tip shark (C. limbatus) Dogtooth tuna Grey mackerel Mud crab Coral trout (Plectropomus laevis) Coral trout (Plectropomus leopardus) Red throat emperor Reef manta Saucer scallop (Ylistrum balloti) Bull shark Grey reef shark

Limitations of the data:

The connectivity information in this dataset is only rough in nature, capturing the interconnections between 7 regions. The connectivity data is based on expert elicitation and so is limited by the knowledge of the experts that were available for the workshop. In most cases the experts had sufficient knowledge to create robust maps. There were however some cases where the knowledge of the participants was limited, or the available scientific knowledge on the topic was limited (particularly for the ‘inter-reefal gardens’ attribute) or the exact meaning of the value attribute was poorly understood or could not be agreed up on (particularly for the social and indigenous heritage maps). This information was noted with the maps. These connectivity maps should be considered as an initial assessment of the connections between each of the regions and should not be used as authoritative maps without consulting with additional sources of information. Each of the connectivity links between regions was recorded with a level of confidence, however these were self-reported, and each assessment was performed relatively quickly, with little time for reflection or review of all the available evidence. It is likely that in many cases the experts tended to have a bias to mark links with strong confidence. During subsequent revisions of some maps there were substantial corrections and adjustments even for connections with a strong confidence, indicating that there could be significant errors in the maps where the experts were not available for subsequent revisions. Each of the maps were reviewed by several project team members with broad general knowledge. Not all connection combinations were captured in this process due to the limited expert time available. A focus was made on capturing the connections between the GBR and its neighbouring regions. Where additional time was available the connections within 4 regions in the GBR was also captured. The connectivity maps only show connections between immediately neighbouring regions, not far connections such as between Torres Strait and Great Sandy Strait. In some cases the connection information for longer distances was recorded from the experts but not used in the mapping process. The coastline polygon and the region boundaries in the maps are not spatially accurate. They were simplified to make the maps more diagrammatic. This was done to reduce the chance of misinterpreting the connection arrows on the map as being spatially explicit.

Format:

This dataset is made up of a spreadsheet that contains all the connectivity information recorded from the expert elicitation and all the GIS files needed to recreate the generated maps.

original/GBR_NESP-TWQ-3-3-3_Seascape-connectivity_Master_v2018-09-05.xlsx: ‘Values connectivity’: This sheet contains the raw connectivity codes transcribed from the templates produced prepared by the subject experts. This is the master copy of the connection information. Subsequent sheets in the spreadsheet are derived using formulas from this table. 1-Vertical-data: This is a transformation of the ‘Values connectivity’ sheet so that each source and destination connection is represented as a single row. This also has the connection mechanism codes split into individual columns to allow easier processing in the map generation. This sheet pulls in the spatial information for the arrows on the maps (‘LinkGeom’ attribute) or crosses that represent no connections (‘NoLinkGeom’) using lookup tables from the ‘Arrow-Geom-LUT’ and ‘NoConnection-Geom-LUT’ sheets. 2.Point-extract: This contains all the ‘no connection’ points from the ‘Values connectivity’ dataset. This was saved as working/ GBR_NESP-TWQ-3-3-3_Seascape-connectivity_no-con-pt.csv and used by the QGIS maps to draw all the crosses on the maps. This table is created by copy and pasting (values only) the ‘1-Vertical-data’ sheet when the ‘NoLinkGeom’ attribute is used to filter out all line features, by unchecking blank rows in the ‘NoLinkGeom’ filter. 2.Line-extract: This contains all the ‘connections’ between regions from the ‘Values connectivity’ dataset. This was saved as working/GBR_NESP-TWQ-3-3-3_Seascape-connectivity_arrows.csv and used by the QGIS maps to draw all the arrows on the maps. This table is created by copy and pasting (values only) the ‘1-Vertical-data’ sheet when the ‘LinkGeom’ attribute is used to filter out all point features, by unchecking blank rows in the ‘LinkGeom’ filter. Map-Atlas-Settings: This contains the metadata for each of the maps generated by QGIS. This sheet was exported as working/GBR_NESP-TWQ-3-3-3_Seascape-connectivity_map-atlas-settings.csv and used by QGIS to drive its Atlas feature to generate one map per row of this table. The AttribID is used to enable and disable the appropriate connections on the map being generated. The WKT attribute (Well Known Text) determines the bounding box of the map to be generated and the other attributes are used to display text on the map. map-image-metadata: This table contains metadata descriptions for each of the value attribute maps. This metadata was exported as a CSV and saved into the final generated JPEG maps using the eAtlas Image Metadata Editor Application

The Digital Geomorphic-GIS Map of Portsmouth Island, North Carolina (1:24,000 scale 2008 mapping) is composed of GIS data layers and GIS tables, and is available in the following GRI-supported GIS data formats: 1.) an ESRI file geodatabase (prti_geomorphology.gdb), and a 2.) Open Geospatial Consortium (OGC) geopackage. The file geodatabase format is supported with a 1.) ArcGIS Pro 3.X map file (.mapx) file (prti_geomorphology.mapx) and individual Pro 3.X layer (.lyrx) files (for each GIS data layer). Upon request, the GIS data is also available in ESRI shapefile format. Contact Stephanie O'Meara (see contact information below) to acquire the GIS data in these GIS data formats. In addition to the GIS data and supporting GIS files, three additional files comprise a GRI digital geologic-GIS dataset or map: 1.) a readme file (calo_geology_gis_readme.pdf), 2.) the GRI ancillary map information document (.pdf) file (calo_geomorphology.pdf) which contains geologic unit descriptions, as well as other ancillary map information and graphics from the source map(s) used by the GRI in the production of the GRI digital geologic-GIS data for the park, and 3.) a user-friendly FAQ PDF version of the metadata (prti_geomorphology_metadata_faq.pdf). Please read the calo_geology_gis_readme.pdf for information pertaining to the proper extraction of the GIS data and other map files. QGIS software is available for free at: https://www.qgis.org/en/site/. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). For a complete listing of GRI products visit the GRI publications webpage: https://www.nps.gov/subjects/geology/geologic-resources-inventory-products.htm. For more information about the Geologic Resources Inventory Program visit the GRI webpage: https://www.nps.gov/subjects/geology/gri.htm. At the bottom of that webpage is a "Contact Us" link if you need additional information. You may also directly contact the program coordinator, Jason Kenworthy (jason_kenworthy@nps.gov). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: North Carolina Geological Survey. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (prti_geomorphology_metadata.txt or prti_geomorphology_metadata_faq.pdf). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:24,000 and United States National Map Accuracy Standards features are within (horizontally) 12.2 meters or 40 feet of their actual location as presented by this dataset. Users of this data should thus not assume the location of features is exactly where they are portrayed in ArcGIS Pro, QGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: https://www.nps.gov/articles/gri-geodatabase-model.htm).

Detrital Zircon Age Files for Chapter 2

The Digital Geologic-GIS Map of Sagamore Hill National Historic Site and Vicinity, New York is composed of GIS data layers and GIS tables, and is available in the following GRI-supported GIS data formats: 1.) a 10.1 file geodatabase (sahi_geology.gdb), a 2.) Open Geospatial Consortium (OGC) geopackage, and 3.) 2.2 KMZ/KML file for use in Google Earth, however, this format version of the map is limited in data layers presented and in access to GRI ancillary table information. The file geodatabase format is supported with a 1.) ArcGIS Pro map file (.mapx) file (sahi_geology.mapx) and individual Pro layer (.lyrx) files (for each GIS data layer), as well as with a 2.) 10.1 ArcMap (.mxd) map document (sahi_geology.mxd) and individual 10.1 layer (.lyr) files (for each GIS data layer). The OGC geopackage is supported with a QGIS project (.qgz) file. Upon request, the GIS data is also available in ESRI 10.1 shapefile format. Contact Stephanie O'Meara (see contact information below) to acquire the GIS data in these GIS data formats. In addition to the GIS data and supporting GIS files, three additional files comprise a GRI digital geologic-GIS dataset or map: 1.) A GIS readme file (sahi_geology_gis_readme.pdf), 2.) the GRI ancillary map information document (.pdf) file (sahi_geology.pdf) which contains geologic unit descriptions, as well as other ancillary map information and graphics from the source map(s) used by the GRI in the production of the GRI digital geologic-GIS data for the park, and 3.) a user-friendly FAQ PDF version of the metadata (sahi_geology_metadata_faq.pdf). Please read the sahi_geology_gis_readme.pdf for information pertaining to the proper extraction of the GIS data and other map files. Google Earth software is available for free at: https://www.google.com/earth/versions/. QGIS software is available for free at: https://www.qgis.org/en/site/. Users are encouraged to only use the Google Earth data for basic visualization, and to use the GIS data for any type of data analysis or investigation. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). For a complete listing of GRI products visit the GRI publications webpage: For a complete listing of GRI products visit the GRI publications webpage: https://www.nps.gov/subjects/geology/geologic-resources-inventory-products.htm. For more information about the Geologic Resources Inventory Program visit the GRI webpage: https://www.nps.gov/subjects/geology/gri,htm. At the bottom of that webpage is a "Contact Us" link if you need additional information. You may also directly contact the program coordinator, Jason Kenworthy (jason_kenworthy@nps.gov). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: U.S. Geological Survey. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (sahi_geology_metadata.txt or sahi_geology_metadata_faq.pdf). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:62,500 and United States National Map Accuracy Standards features are within (horizontally) 31.8 meters or 104.2 feet of their actual _location as presented by this dataset. Users of this data should thus not assume the _location of features is exactly where they are portrayed in Google Earth, ArcGIS, QGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: https://www.nps.gov/articles/gri-geodatabase-model.htm).

The data are derived from interpretation of seismic reflection profiles within the offshore Corinth Rift, Greece (the Gulf of Corinth) integrated with IODP scientific ocean drilling borehole data from IODP Expedition 381 (McNeill et al., 2019a, 2019b). The data include rift fault coordinate (location, geometry) information and slip rate and extension rate information for the major faults. Seismic reflection data were published in Taylor et al. (2011) and in Nixon et al. (2016). Preliminary fault interpretations and rate data, prior to IODP drilling, were published in Nixon et al. (2016). Details of datasets: The data can be viewed in GIS software (ArcGIS, QGIS) or the Excel and .dbf files can be used for viewing of rate data and import of fault coordinates into other software. The 4 folders are for different time periods with shape files for the N-Dipping and S-Dipping Faults in the offshore Corinth Rift and respective slip and extension (horizontal) rates. The shapefiles are digitised fault traces for the basement offsetting faults, picked from the Multichannel Seismic Data collected by the R/V Maurice Ewing. Fault traces are segmented and each segment has an average throw (vertical) rate (Tavg) in mm/yr. The rates for the segments are averages based on measurements at the ends of each segment. The major fault trace segments also have slip-rates (slip_rate) and extension-rates (ext_rate or extension_) in mm/yr. All rates as well as the names for major faults can be located in the attribute table of the shape files along with X- and Y-coordinates. The coordinate system is WGS84 UTM Zone 34N. The shape files can be loaded into a GIS (ArcGIS, QGIS etc.) allowing mapping and visualization of the fault traces and their activity rates. In addition, the attribute tables are .dbf files found within each folder. These have also been provided as .xlsx (Excel) files which include the fault coordinate information, and slip rates and extension rates along the major faults. References McNeill, L.C., Shillington, D.J., Carter, G.D.O., and the Expedition 381 Participants, 2019a. Corinth Active Rift Development. Proceedings of the International Ocean Discovery Program, 381: College Station, TX (International Ocean Discovery Program). McNeill, L.C., Shillington, D.J., et al., 2019b, High-resolution record reveals climate-driven environmental and sedimentary changes in an active rift, Scientific Reports, 9, 3116. Nixon, C.W., McNeill, L.C., Bull, J.M., Bell, R.E., Gawthorpe, R.L., Henstock, T.J., Christodoulou, D., Ford, M., Taylor, B., Sakellariou, S. et al., 2016. Rapid spatiotemporal variations in rift structure during development of the Corinth Rift, central Greece. Tectonics, 35, 1225–1248. Taylor, B., J. R. Weiss, A. M. Goodliffe, M. Sachpazi, M. Laigle, and A. Hirn (2011), The structures, stratigraphy and evolution of the Gulf of Corinth Rift, Greece, Geophys. J. Int., 185(3), 1189–1219.

The Digital Geomorphic-GIS Map of Cape Lookout National Seashore, North Carolina (1:10,000 scale 2008 mapping) is composed of GIS data layers and GIS tables, and is available in the following GRI-supported GIS data formats: 1.) an ESRI file geodatabase (calo_geomorphology.gdb), a 2.) Open Geospatial Consortium (OGC) geopackage, and 3.) 2.2 KMZ/KML file for use in Google Earth, however, this format version of the map is limited in data layers presented and in access to GRI ancillary table information. The file geodatabase format is supported with a 1.) ArcGIS Pro 3.X map file (.mapx) file (calo_geomorphology.mapx) and individual Pro 3.X layer (.lyrx) files (for each GIS data layer). The OGC geopackage is supported with a QGIS project (.qgz) file. Upon request, the GIS data is also available in ESRI shapefile format. Contact Stephanie O'Meara (see contact information below) to acquire the GIS data in these GIS data formats. In addition to the GIS data and supporting GIS files, three additional files comprise a GRI digital geologic-GIS dataset or map: 1.) a readme file (calo_geology_gis_readme.pdf), 2.) the GRI ancillary map information document (.pdf) file (calo_geomorphology.pdf) which contains geologic unit descriptions, as well as other ancillary map information and graphics from the source map(s) used by the GRI in the production of the GRI digital geologic-GIS data for the park, and 3.) a user-friendly FAQ PDF version of the metadata (calo_geomorphology_metadata_faq.pdf). Please read the calo_geology_gis_readme.pdf for information pertaining to the proper extraction of the GIS data and other map files. Google Earth software is available for free at: https://www.google.com/earth/versions/. QGIS software is available for free at: https://www.qgis.org/en/site/. Users are encouraged to only use the Google Earth data for basic visualization, and to use the GIS data for any type of data analysis or investigation. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). For a complete listing of GRI products visit the GRI publications webpage: https://www.nps.gov/subjects/geology/geologic-resources-inventory-products.htm. For more information about the Geologic Resources Inventory Program visit the GRI webpage: https://www.nps.gov/subjects/geology/gri.htm. At the bottom of that webpage is a "Contact Us" link if you need additional information. You may also directly contact the program coordinator, Jason Kenworthy (jason_kenworthy@nps.gov). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: East Carolina University. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (calo_geomorphology_metadata.txt or calo_geomorphology_metadata_faq.pdf). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:10,000 and United States National Map Accuracy Standards features are within (horizontally) 8.5 meters or 27.8 feet of their actual _location as presented by this dataset. Users of this data should thus not assume the _location of features is exactly where they are portrayed in Google Earth, ArcGIS Pro, QGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: https://www.nps.gov/articles/gri-geodatabase-model.htm).

AbstractLocating faults can be challenging in urban environments and low-strain rate regions, where anthropogenic and surface processes between earthquakes erode surface expressions of faulting. Concealed fault detection is critical for hazard assessment and mitigation, as earthquakes on unidentified faults can have serious consequences. Common geophysical methods for identifying subsurface faults are challenging to implement in urban areas due to, for example, difficulties associated with permitting and anthropogenic noise. However, urban development can provide rich resources for identifying concealed faults, such as geotechnical boreholes and high-resolution LiDAR topography. The Tāmaki Makaurau Auckland area of Aotearoa/New Zealand is the country’s most populated region in a relatively tectonically stable setting, where intense urbanisation and Quaternary volcanics mask potential faults. We developed a new methodology and workflow to identify and assess the reliability of concealed structures in Auckland, using borehole, geophysical and outcrop data. From a database of >8,200 boreholes, we identify 46 post-Miocene structures, including ten likely and 25 possible faults. We also provide a new QGIS database of borehole and fault data to enable future refinement of our interpretations. This work shows how data associated with urbanisation can be leveraged to complement traditional methods of identifying concealed faults.

A continuous dataset of Land Surface Temperature (LST) is vital for climatological and environmental studies. LST can be regarded as a combination of seasonal mean temperature (climatology) and daily anomaly, which is attributed mainly to the synoptic-scale atmospheric circulation (weather). To reproduce LST in cloudy pixels, time series (2002-2019) of cloud-free 1km MODIS Aqua LST images were generated and the pixel-based seasonality (climatology) was calculated using temporal Fourier analysis. To add the anomaly, we used the NCEP Climate Forecast System Version 2 (CFSv2) model, which provides air surface temperature under both cloudy and clear sky conditions. The combination of the two sources of data enables the estimation of LST in cloudy pixels.

Data structure

The dataset consists of geo-located continuous LST (Day, Night and Daily) which calculates LST values of cloudy pixels. The spatial domain of the data is the Eastern Mediterranean, at the resolution of the MYD11A1 product (~1 Km). Data are stored in GeoTIFF format as signed 16-bit integers using a scale factor of 0.02, with one file per day, each defined by 4 dimensions (Night LST Cont., Day LST Cont., Daily Average LST Cont., QA). The QA band stores information about the presence of cloud in the original pixel. If in both original files, Day LST and Night LST there was NoData due to clouds, then the QA value is 0. QA value of 1 indicates NoData at original Day LST, 2 indicates NoData at Night LST and 3 indicates valid data at both, day and night. File names follow this naming convention: LST_ 

This is the organizing QGIS project file 'HistoricWaterpowerBritain', whose supporting files are under 'Files' in Data S1. This QGIS project supports Jonell, T.N., Jones, P., Lucas, A., Naylor, S., 2024, Limited waterpower contributed to rise of steam power in British ‘Cottonopolis’: Proceedings of the National Academy of Sciences Nexus, doi: 10.1093/pnasnexus/pgae251

ArcGIS and QGIS map packages, with ESRI shapefiles for the DSM2 Model Grid. These are not finalized products. Locations in these shapefiles are approximate.

Monitoring Stations - shapefile with approximate locations of monitoring stations.

DSM2 v8.2.0, calibrated version:

• dsm2_8_2_grid_map_calibrated.mpkx - ArcGIS Pro map package containing all layers and symbology for the calibrated grid map.
• dsm2_8_2_grid_map_calibrated.mpk - ArcGIS Desktop map package containing all layers and symbology for the calibrated grid map.
• dsm2_8_2_0_calibrated_grid_map_qgis.zip - QGIS map package containing all layers and symbology for the calibrated grid map.
• dsm2_8_2_0_calibrated_gridmap_shapefiles.zip - A zip file containing all the shapefiles used in the above map packages:
• dsm2_8_2_0_calibrated_channels_centerlines - channel centerlines, follwing the path of CSDP centerlines
• dsm2_8_2_0_calibrated_network_channels - channels represented by straight line segments which are connected the upstream and downstream nodes
• dsm2_8_2_0_calibrated_nodes - DSM2 nodes
• dsm2_8_2_0_calibrated_dcd_only_nodes - Nodes that are only used by DCD
• dsm2_8_2_0_calibrated_and_dcd_nodes - Nodes that are shared by DSM2 and DCD
• dsm2_8_2_0_calibrated_and_smcd_nodes - Nodes that are shared by DSM2 and SMCD
• dsm2_8_2_0_calibrated_gates_actual_loc - The approximate actual locations of each gate in DSM2
• dsm2_8_2_0_calibrated_gates_grid_loc - The locations of each gate in the DSM2 model grid
• dsm2_8_2_0_calibrated_reservoirs - The approximate locations of the reservoirs in DSM2
• dsm2_8_2_0_calibrated_reservoir_connections - Lines showing connections from reservoirs to nodes in DSM2

DSM2 v8.2.1, historical version:

• DSM2 v8.2.1, historical version grid map release notes (PDF), updated 7/12/2022
• DSM2 v8.2.1, historical version grid map, single zoom level (PDF)
• DSM2 v8.2.1, historical version grid map, multiple zoom levels (PDF) - PDF grid map designed to be printed on 3 foot wide plotter paper.
• DSM2 v8.2.1, historical version map package for ArcGIS Desktop: A map package for ArcGIS Desktop containing the grid map layers with symbology.
• DSM2 v8.2.1, historical version grid map shapefiles (zip): A zip file containing the shapefiles used in the grid map.

Change Log

7/12/2022: The document "DSM2 v8.2.1, historical version grid map release notes (PDF)" was corrected by removing section 4.4, which incorrectly stated that the grid included channels 710-714, representing the Toe Drain, and that the Yolo Flyway restoration area was included.