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The MIT-BIH Arrhythmia Database contains 48 half-hour excerpts of two-channel ambulatory ECG recordings, obtained from 47 subjects studied by the BIH Arrhythmia Laboratory between 1975 and 1979. Twenty-three recordings were chosen at random from a set of 4000 24-hour ambulatory ECG recordings collected from a mixed population of inpatients (about 60%) and outpatients (about 40%) at Boston's Beth Israel Hospital; the remaining 25 recordings were selected from the same set to include less common but clinically significant arrhythmias that would not be well-represented in a small random sample.
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Physikalisch-Technische Bundesanstalt (PTB), the National Metrology Institute of Germany, has provided this compilation of digitized ECGs for research, algorithmic benchmarking or teaching purposes to the users of PhysioNet. The ECGs were collected from healthy volunteers and patients with different heart diseases by Professor Michael Oeff, M.D.
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This database includes 25 long-term ECG recordings of human subjects with atrial fibrillation (mostly paroxysmal).
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The MIMIC-III Waveform Database contains 67,830 record sets for approximately 30,000 ICU patients. Almost all record sets include a waveform record containing digitized signals (typically including ECG, ABP, respiration, and PPG, and frequently other signals) and a “numerics” record containing time series of periodic measurements, each presenting a quasi-continuous recording of vital signs of a single patient throughout an ICU stay (typically a few days, but many are several weeks in duration). A subset of this database contains waveform and numerics records that have been matched and time-aligned with MIMIC-III Clinical Database records.
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This database includes 22 half-hour ECG recordings of subjects who experienced episodes of sustained ventricular tachycardia, ventricular flutter, and ventricular fibrillation.
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The 2017 PhysioNet/CinC Challenge aims to encourage the development of algorithms to classify, from a single short ECG lead recording (between 30 s and 60 s in length), whether the recording shows normal sinus rhythm, atrial fibrillation (AF), an alternative rhythm, or is too noisy to be classified.
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The data consist of 70 records, divided into a learning set of 35 records (a01 through a20, b01 through b05, and c01 through c10), and a test set of 35 records (x01 through x35), all of which may be downloaded from this page. Recordings vary in length from slightly less than 7 hours to nearly 10 hours each. Each recording includes a continuous digitized ECG signal, a set of apnea annotations (derived by human experts on the basis of simultaneously recorded respiration and related signals), and a set of machine-generated QRS annotations (in which all beats regardless of type have been labeled normal). In addition, eight recordings (a01 through a04, b01, and c01 through c03) are accompanied by four additional signals (Resp C and Resp A, chest and abdominal respiratory effort signals obtained using inductance plethysmography; Resp N, oronasal airflow measured using nasal thermistors; and SpO2, oxygen saturation).
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Electrocardiography (ECG) is a key diagnostic tool to assess the cardiac condition of a patient. Automatic ECG interpretation algorithms as diagnosis support systems promise large reliefs for the medical personnel - only on the basis of the number of ECGs that are routinely taken. However, the development of such algorithms requires large training datasets and clear benchmark procedures. In our opinion, both aspects are not covered satisfactorily by existing freely accessible ECG datasets.
The PTB-XL ECG dataset is a large dataset of 21799 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw waveform data was annotated by up to two cardiologists, who assigned potentially multiple ECG statements to each record. The in total 71 different ECG statements conform to the SCP-ECG standard and cover diagnostic, form, and rhythm statements. To ensure comparability of machine learning algorithms trained on the dataset, we provide recommended splits into training and test sets. In combination with the extensive annotation, this turns the dataset into a rich resource for the training and the evaluation of automatic ECG interpretation algorithms. The dataset is complemented by extensive metadata on demographics, infarction characteristics, likelihoods for diagnostic ECG statements as well as annotated signal properties.
https://www.gnu.org/licenses/gpl.htmlhttps://www.gnu.org/licenses/gpl.html
Effective processing and analysis of physiological data requires specialized software. We have developed a large collection of such software over the past thirty years, and much of it is contained within the WFDB (Waveform Database) Software Package. The WFDB Software Package comprises over 70 applications for signal processing and automated analysis. A comprehensive collection of documentation, including tutorials and reference manuals, is also included in the package. The package is written in highly portable C and can be used on all popular platforms, including GNU/Linux, MacOS, MS-Windows, and all versions of Unix. The package has also been ported to other popular languages, including Matlab and Python.
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This database consists of 75 annotated recordings extracted from 32 Holter records. Each record is 30 minutes long and contains 12 standard leads, each sampled at 257 Hz, with gains varying from 250 to 1100 analog-to-digital converter units per millivolt.
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This database includes 12 half-hour ECG recordings and 3 half-hour recordings of noise typical in ambulatory ECG recordings. The noise recordings were made using physically active volunteers and standard ECG recorders, leads, and electrodes; the electrodes were placed on the limbs in positions in which the subjects’ ECGs were not visible.
https://github.com/MIT-LCP/license-and-dua/tree/master/draftshttps://github.com/MIT-LCP/license-and-dua/tree/master/drafts
Retrospectively collected medical data has the opportunity to improve patient care through knowledge discovery and algorithm development. Broad reuse of medical data is desirable for the greatest public good, but data sharing must be done in a manner which protects patient privacy. Here we present Medical Information Mart for Intensive Care (MIMIC)-IV, a large deidentified dataset of patients admitted to the emergency department or an intensive care unit at the Beth Israel Deaconess Medical Center in Boston, MA. MIMIC-IV contains data for over 65,000 patients admitted to an ICU and over 200,000 patients admitted to the emergency department. MIMIC-IV incorporates contemporary data and adopts a modular approach to data organization, highlighting data provenance and facilitating both individual and combined use of disparate data sources. MIMIC-IV is intended to carry on the success of MIMIC-III and support a broad set of applications within healthcare.
https://github.com/MIT-LCP/license-and-dua/tree/master/draftshttps://github.com/MIT-LCP/license-and-dua/tree/master/drafts
MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The database includes information such as demographics, vital sign measurements made at the bedside (~1 data point per hour), laboratory test results, procedures, medications, caregiver notes, imaging reports, and mortality (including post-hospital discharge).MIMIC supports a diverse range of analytic studies spanning epidemiology, clinical decision-rule improvement, and electronic tool development. It is notable for three factors: it is freely available to researchers worldwide; it encompasses a diverse and very large population of ICU patients; and it contains highly granular data, including vital signs, laboratory results, and medications.
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This database, collected at the Children’s Hospital Boston, consists of EEG recordings from pediatric subjects with intractable seizures. Subjects were monitored for up to several days following withdrawal of anti-seizure medication in order to characterize their seizures and assess their candidacy for surgical intervention. The recordings are grouped into 23 cases and were collected from 22 subjects (5 males, ages 3–22; and 17 females, ages 1.5–19).
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The files available here are not part of the AHA Database. The 0001.* and 0201.* files have been derived from a sample given to us in 1980 by the creators of the AHA Database. The original recording had been a candidate for inclusion in the database and was digitized and annotated using the same methods used for the AHA Database records. After the annotation process was complete, the recording was excluded from the AHA Database since it was found to contain ectopy of a higher grade than the class for which it had been chosen as a candidate.
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The electrocardiogram (ECG) is a non-invasive representation of the electrical activity of the heart from electrodes placed on the surface of the torso. The standard 12-lead ECG has been widely used to diagnose a variety of cardiac abnormalities such as cardiac arrhythmias, and predicts cardiovascular morbidity and mortality [1]. The early and correct diagnosis of cardiac abnormalities can increase the chances of successful treatments [2]. However, manual interpretation of the electrocardiogram is time-consuming, and requires skilled personnel with a high degree of training [3].
Automatic detection and classification of cardiac abnormalities can assist physicians in the diagnosis of the growing number of ECGs recorded. Over the last decade, there have been increasing numbers of attempts to stimulate 12-lead ECG classification. Many of these algorithms seem to have the potential for accurate identification of cardiac abnormalities. However, most of these methods have only been tested or developed in single, small, or relatively homogeneous datasets. The PhysioNet/Computing in Cardiology Challenge 2020 provides an opportunity to address this problem by providing data from a wide set of sources.
The MIMIC-IV-ECG module contains approximately 800,000 diagnostic electrocardiograms across nearly 160,000 unique patients. These diagnostic ECGs use 12 leads and are 10 seconds in length. They are sampled at 500 Hz. This subset contains all of the ECGs for patients who appear in the MIMIC-IV Clinical Database. When a cardiologist report is available for a given ECG, we provide the needed information to link the waveform to the report. The patients in MIMIC-IV-ECG have been matched against the MIMIC-IV Clinical Database, making it possible to link to information across the MIMIC-IV modules.
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The 2016 PhysioNet/CinC Challenge aims to encourage the development of algorithms to classify heart sound recordings collected from a variety of clinical or nonclinical (such as in-home visits) environments. The aim is to identify, from a single short recording (10-60s) from a single precordial location, whether the subject of the recording should be referred on for an expert diagnosis.
https://github.com/MIT-LCP/license-and-dua/tree/master/draftshttps://github.com/MIT-LCP/license-and-dua/tree/master/drafts
MIMIC-IV-ED is a large, freely available database of emergency department (ED) admissions at the Beth Israel Deaconess Medical Center between 2011 and 2019. The database contains ~425,000 ED stays. Vital signs, triage information, medication reconciliation, medication administration, and discharge diagnoses are available. All data are deidentified to comply with the Health Information Portability and Accountability Act (HIPAA) Safe Harbor provision. MIMIC-IV-ED is intended to support a diverse range of education initiatives and research studies.
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MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over 40,000 patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012 [1]. The MIMIC-III Clinical Database is available on PhysioNet (doi: 10.13026/C2XW26). Though deidentified, MIMIC-III contains detailed information regarding the care of real patients, and as such requires credentialing before access. To allow researchers to ascertain whether the database is suitable for their work, we have manually curated a demo subset, which contains information for 100 patients also present in the MIMIC-III Clinical Database. Notably, the demo dataset does not include free-text notes.
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The MIT-BIH Arrhythmia Database contains 48 half-hour excerpts of two-channel ambulatory ECG recordings, obtained from 47 subjects studied by the BIH Arrhythmia Laboratory between 1975 and 1979. Twenty-three recordings were chosen at random from a set of 4000 24-hour ambulatory ECG recordings collected from a mixed population of inpatients (about 60%) and outpatients (about 40%) at Boston's Beth Israel Hospital; the remaining 25 recordings were selected from the same set to include less common but clinically significant arrhythmias that would not be well-represented in a small random sample.