• Cleaned_Dataset.csv – The combined CSV files of all scraped documents from DABI, e-LiS, o-bib and Springer.
• Data_Cleaning.ipynb – The Jupyter Notebook with python code for the analysis and cleaning of the original dataset.
• ger_train.csv – The German training set as CSV file.
• ger_validation.csv – The German validation set as CSV file.
• en_test.csv – The English test set as CSV file.
• en_train.csv – The English training set as CSV file.
• en_validation.csv – The English validation set as CSV file.
• splitting.py – The python code for splitting a dataset into train, test and validation set.
• DataSetTrans_de.csv – The final German dataset as a CSV file.
• DataSetTrans_en.csv – The final English dataset as a CSV file.
• translation.py – The python code for translating the cleaned dataset.

How To Cite?

Alinaghi, N., Giannopoulos, I., Kattenbeck, M., & Raubal, M. (2025). Decoding wayfinding: analyzing wayfinding processes in the outdoor environment. International Journal of Geographical Information Science, 1–31. https://doi.org/10.1080/13658816.2025.2473599

Link to the paper: https://www.tandfonline.com/doi/full/10.1080/13658816.2025.2473599

Folder Structure

The folder named “submission” contains the following:

1. “pythonProject”: This folder contains all the Python files and subfolders needed for analysis.
2. ijgis.yml: This file lists all the Python libraries and dependencies required to run the code.

Setting Up the Environment

1. Use the ijgis.yml file to create a Python project and environment. Ensure you activate the environment before running the code.
2. The pythonProject folder contains several .py files and subfolders, each with specific functionality as described below.

Subfolders

1. Data_4_IJGIS

• This folder contains the data used for the results reported in the paper.
• Note: The data analysis that we explain in this paper already begins with the synchronization and cleaning of the recorded raw data. The published data is already synchronized and cleaned. Both the cleaned files and the merged files with features extracted for them are given in this directory. If you want to perform the segmentation and feature extraction yourself, you should run the respective Python files yourself. If not, you can use the “merged_…csv” files as input for the training.

2. results_[DateTime] (e.g., results_20240906_15_00_13)

• This folder will be generated when you run the code and will store the output of each step.
• The current folder contains results created during code debugging for the submission.
• When you run the code, a new folder with fresh results will be generated.

Python Files

1. helper_functions.py

• Contains reusable functions used throughout the analysis.
• Each function includes a description of its purpose and the input parameters required.

2. create_sanity_plots.py

• Generates scatter plots like those in Figure 3 of the paper.
• Although the code has been run for all 309 trials, it can be used to check the sample data provided.
• Output: A .png file for each column of the raw gaze and IMU recordings, color-coded with logged events.
• Usage: Run this file to create visualizations similar to Figure 3.

3. overlapping_sliding_window_loop.py

• Implements overlapping sliding window segmentation and generates plots like those in Figure 4.
• Output:
  • Two new subfolders, “Gaze” and “IMU”, will be added to the Data_4_IJGIS folder.
  • Segmented files (default: 2–10 seconds with a 1-second step size) will be saved as .csv files.
  • A visualization of the segments, similar to Figure 4, will be automatically generated.

4. gaze_features.py & imu_features.py (Note: there has been an update to the IDT function implementation in the gaze_features.py on 19.03.2025.)

• These files compute features as explained in Tables 1 and 2 of the paper, respectively.
• They process the segmented recordings generated by the overlapping_sliding_window_loop.py.
• Usage: Just to know how the features are calculated, you can run this code after the segmentation with the sliding window and run these files to calculate the features from the segmented data.

5. training_prediction.py

• This file contains the main machine learning analysis of the paper. This file contains all the code for the training of the model, its evaluation, and its use for the inference of the “monitoring part”. It covers the following steps:

a. Data Preparation (corresponding to Section 5.1.1 of the paper)

• Prepares the data according to the research question (RQ) described in the paper. Since this data was collected with several RQs in mind, we remove parts of the data that are not related to the RQ of this paper.
• A function named plot_labels_comparison(df, save_path, x_label_freq=10, figsize=(15, 5)) in line 116 visualizes the data preparation results. As this visualization is not used in the paper, the line is commented out, but if you want to see visually what has been changed compared to the original data, you can comment out this line.

b. Training/Validation/Test Split

• Splits the data for machine learning experiments (an explanation can be found in Section 5.1.1. Preparation of data for training and inference of the paper).
• Make sure that you follow the instructions in the comments to the code exactly.
• Output: The split data is saved as .csv files in the results folder.

c. Machine and Deep Learning Experiments

This part contains three main code blocks:

iii. One for the XGboost code with correct hyperparameter tuning:
Please read the instructions for each block carefully to ensure that the code works smoothly. Regardless of which block you use, you will get the classification results (in the form of scores) for unseen data. The way we empirically test the confidence threshold of

• MLP Network (Commented Out): This code was used for classification with the MLP network, and the results shown in Table 3 are from this code. If you wish to use this model, please comment out the following blocks accordingly.
• XGBoost without Hyperparameter Tuning: If you want to run the code but do not want to spend time on the full training with hyperparameter tuning (as was done for the paper), just uncomment this part. This will give you a simple, untuned model with which you can achieve at least some results.
• XGBoost with Hyperparameter Tuning: If you want to train the model the way we trained it for the analysis reported in the paper, use this block (the plots in Figure 7 are from this block). We ran this block with different feature sets and different segmentation files and created a simple bar chart from the saved results, shown in Figure 6.

Note: Please read the instructions for each block carefully to ensure that the code works smoothly. Regardless of which block you use, you will get the classification results (in the form of scores) for unseen data. The way we empirically calculated the confidence threshold of the model (explained in the paper in Section 5.2. Part II: Decoding surveillance by sequence analysis) is given in this block in lines 361 to 380.

d. Inference (Monitoring Part)

• Final inference is performed using the monitoring data. This step produces a .csv file containing inferred labels.
• Figure 8 in the paper is generated using this part of the code.

6. sequence_analysis.py

• Performs analysis on the inferred data, producing Figures 9 and 10 from the paper.
• This file reads the inferred data from the previous step and performs sequence analysis as described in Sections 5.2.1 and 5.2.2.

Licenses

The data is licensed under CC-BY, the code is licensed under MIT.

A collection of datasets and python scripts for extraction and analysis of isograms (and some palindromes and tautonyms) from corpus-based word-lists, specifically Google Ngram and the British National Corpus (BNC).Below follows a brief description, first, of the included datasets and, second, of the included scripts.1. DatasetsThe data from English Google Ngrams and the BNC is available in two formats: as a plain text CSV file and as a SQLite3 database.1.1 CSV formatThe CSV files for each dataset actually come in two parts: one labelled ".csv" and one ".totals". The ".csv" contains the actual extracted data, and the ".totals" file contains some basic summary statistics about the ".csv" dataset with the same name.The CSV files contain one row per data point, with the colums separated by a single tab stop. There are no labels at the top of the files. Each line has the following columns, in this order (the labels below are what I use in the database, which has an identical structure, see section below):

Label Data type Description

isogramy int The order of isogramy, e.g. "2" is a second order isogram

length int The length of the word in letters

word text The actual word/isogram in ASCII

source_pos text The Part of Speech tag from the original corpus

count int Token count (total number of occurences)

vol_count int Volume count (number of different sources which contain the word)

count_per_million int Token count per million words

vol_count_as_percent int Volume count as percentage of the total number of volumes

is_palindrome bool Whether the word is a palindrome (1) or not (0)

is_tautonym bool Whether the word is a tautonym (1) or not (0)

The ".totals" files have a slightly different format, with one row per data point, where the first column is the label and the second column is the associated value. The ".totals" files contain the following data:

Label

Data type

Description

!total_1grams

int

The total number of words in the corpus

!total_volumes

int

The total number of volumes (individual sources) in the corpus

!total_isograms

int

The total number of isograms found in the corpus (before compacting)

!total_palindromes

int

How many of the isograms found are palindromes

!total_tautonyms

int

How many of the isograms found are tautonyms

The CSV files are mainly useful for further automated data processing. For working with the data set directly (e.g. to do statistics or cross-check entries), I would recommend using the database format described below.1.2 SQLite database formatOn the other hand, the SQLite database combines the data from all four of the plain text files, and adds various useful combinations of the two datasets, namely:• Compacted versions of each dataset, where identical headwords are combined into a single entry.• A combined compacted dataset, combining and compacting the data from both Ngrams and the BNC.• An intersected dataset, which contains only those words which are found in both the Ngrams and the BNC dataset.The intersected dataset is by far the least noisy, but is missing some real isograms, too.The columns/layout of each of the tables in the database is identical to that described for the CSV/.totals files above.To get an idea of the various ways the database can be queried for various bits of data see the R script described below, which computes statistics based on the SQLite database.2. ScriptsThere are three scripts: one for tiding Ngram and BNC word lists and extracting isograms, one to create a neat SQLite database from the output, and one to compute some basic statistics from the data. The first script can be run using Python 3, the second script can be run using SQLite 3 from the command line, and the third script can be run in R/RStudio (R version 3).2.1 Source dataThe scripts were written to work with word lists from Google Ngram and the BNC, which can be obtained from http://storage.googleapis.com/books/ngrams/books/datasetsv2.html and [https://www.kilgarriff.co.uk/bnc-readme.html], (download all.al.gz).For Ngram the script expects the path to the directory containing the various files, for BNC the direct path to the *.gz file.2.2 Data preparationBefore processing proper, the word lists need to be tidied to exclude superfluous material and some of the most obvious noise. This will also bring them into a uniform format.Tidying and reformatting can be done by running one of the following commands:python isograms.py --ngrams --indir=INDIR --outfile=OUTFILEpython isograms.py --bnc --indir=INFILE --outfile=OUTFILEReplace INDIR/INFILE with the input directory or filename and OUTFILE with the filename for the tidied and reformatted output.2.3 Isogram ExtractionAfter preparing the data as above, isograms can be extracted from by running the following command on the reformatted and tidied files:python isograms.py --batch --infile=INFILE --outfile=OUTFILEHere INFILE should refer the the output from the previosu data cleaning process. Please note that the script will actually write two output files, one named OUTFILE with a word list of all the isograms and their associated frequency data, and one named "OUTFILE.totals" with very basic summary statistics.2.4 Creating a SQLite3 databaseThe output data from the above step can be easily collated into a SQLite3 database which allows for easy querying of the data directly for specific properties. The database can be created by following these steps:1. Make sure the files with the Ngrams and BNC data are named “ngrams-isograms.csv” and “bnc-isograms.csv” respectively. (The script assumes you have both of them, if you only want to load one, just create an empty file for the other one).2. Copy the “create-database.sql” script into the same directory as the two data files.3. On the command line, go to the directory where the files and the SQL script are. 4. Type: sqlite3 isograms.db 5. This will create a database called “isograms.db”.See the section 1 for a basic descript of the output data and how to work with the database.2.5 Statistical processingThe repository includes an R script (R version 3) named “statistics.r” that computes a number of statistics about the distribution of isograms by length, frequency, contextual diversity, etc. This can be used as a starting point for running your own stats. It uses RSQLite to access the SQLite database version of the data described above.

Reddit is a social news, content rating and discussion website. It's one of the most popular sites on the internet. Reddit has 52 million daily active users and approximately 430 million users who use it once a month. Reddit has different subreddits and here We'll use the r/AskScience Subreddit.

The dataset is extracted from the subreddit /r/AskScience from Reddit. The data was collected between 01-01-2016 and 20-05-2022. It contains 612,668 Datapoints and 25 Columns. The database contains a number of information about the questions asked on the subreddit, the description of the submission, the flair of the question, NSFW or SFW status, the year of the submission, and more. The data is extracted using python and Pushshift's API. A little bit of cleaning is done using NumPy and pandas as well. (see the descriptions of individual columns below).

The dataset contains the following columns and descriptions: author - Redditor Name author_fullname - Redditor Full name contest_mode - Contest mode [implement obscured scores and randomized sorting]. created_utc - Time the submission was created, represented in Unix Time. domain - Domain of submission. edited - If the post is edited or not. full_link - Link of the post on the subreddit. id - ID of the submission. is_self - Whether or not the submission is a self post (text-only). link_flair_css_class - CSS Class used to identify the flair. link_flair_text - Flair on the post or The link flair’s text content. locked - Whether or not the submission has been locked. num_comments - The number of comments on the submission. over_18 - Whether or not the submission has been marked as NSFW. permalink - A permalink for the submission. retrieved_on - time ingested. score - The number of upvotes for the submission. description - Description of the Submission. spoiler - Whether or not the submission has been marked as a spoiler. stickied - Whether or not the submission is stickied. thumbnail - Thumbnail of Submission. question - Question Asked in the Submission. url - The URL the submission links to, or the permalink if a self post. year - Year of the Submission. banned - Banned by the moderator or not.

This dataset can be used for Flair Prediction, NSFW Classification, and different Text Mining/NLP tasks. Exploratory Data Analysis can also be done to get the insights and see the trend and patterns over the years.

CodeParrot 🦜 Dataset Cleaned

  What is it?

A dataset of Python files from Github. This is the deduplicated version of the codeparrot.

  Processing

The original dataset contains a lot of duplicated and noisy data. Therefore, the dataset was cleaned with the following steps:

Deduplication Remove exact matches

Filtering Average line length < 100 Maximum line length < 1000 Alpha numeric characters fraction > 0.25 Remove auto-generated files (keyword search)

For… See the full description on the dataset page: https://huggingface.co/datasets/codeparrot/codeparrot-clean.

klib library enables us to quickly visualize missing data, perform data cleaning, visualize data distribution plot, visualize correlation plot and visualize categorical column values. klib is a Python library for importing, cleaning, analyzing and preprocessing data. Explanations on key functionalities can be found on Medium / TowardsDataScience in the examples section or on YouTube (Data Professor).

Original Github repo

https://raw.githubusercontent.com/akanz1/klib/main/examples/images/header.png" alt="klib Header">

Usage

!pip install klib

import klib
import pandas as pd

df = pd.DataFrame(data)

# klib.describe functions for visualizing datasets
- klib.cat_plot(df) # returns a visualization of the number and frequency of categorical features
- klib.corr_mat(df) # returns a color-encoded correlation matrix
- klib.corr_plot(df) # returns a color-encoded heatmap, ideal for correlations
- klib.dist_plot(df) # returns a distribution plot for every numeric feature
- klib.missingval_plot(df) # returns a figure containing information about missing values

Examples

Take a look at this starter notebook.

Further examples, as well as applications of the functions can be found here.

Contributing

Pull requests and ideas, especially for further functions are welcome. For major changes or feedback, please open an issue first to discuss what you would like to change. Take a look at this Github repo.

License

MIT

This upload includes the following files related to the Python analysis:

- Raw data as a XLSX table (brushing_v2.xlsx), i.e. results from R Script #1 (see https://doi.org/10.5281/zenodo.3632517)

- Python script of the whole analysis (BrushingDirt_Analysis.py)

- Jupyter notebook files of the analysis run on epLsar as an example (NotebookBrushingDirt_4Level.inpyb) and of a summary of the whole analysis (NotebookBrushingDirt_Overview_4LevelPlots.ipynb), and associated HTML output files (*.html).

- Full samples of parameter values for each parameter (*.pkl)

- Energy plots of Hamiltonian Monte Carlo for each parameter, as PDF files (*_Energy.pdf)

- Contrast plots between each treatment (No_Is, Is_No, Is_Is) and the control (No_No) for each parameter (*_Contrasts.pdf)

- Trace plots for each parameter (*_Trace.pdf)

- Distribution of posteriors for each parameter (*_Posterior.pdf)

python scripts and functions needed to view and clean saccade data

US Census Bureau conducts American Census Survey 1 and 5 Yr surveys that record various demographics and provide public access through APIs. I have attempted to call the APIs through the python environment using the requests library, Clean, and organize the data in a usable format.

Data Ingestion and Cleaning:

ACS Subject data [2011-2019] was accessed using Python by following the below API Link: https://api.census.gov/data/2011/acs/acs1?get=group(B08301)&for=county:* The data was obtained in JSON format by calling the above API, then imported as Python Pandas Dataframe. The 84 variables returned have 21 Estimate values for various metrics, 21 pairs of respective Margin of Error, and respective Annotation values for Estimate and Margin of Error Values. This data was then undergone through various cleaning processes using Python, where excess variables were removed, and the column names were renamed. Web-Scraping was carried out to extract the variables' names and replace the codes in the column names in raw data.

The above step was carried out for multiple ACS/ACS-1 datasets spanning 2011-2019 and then merged into a single Python Pandas Dataframe. The columns were rearranged, and the "NAME" column was split into two columns, namely 'StateName' and 'CountyName.' The counties for which no data was available were also removed from the Dataframe. Once the Dataframe was ready, it was separated into two new dataframes for separating State and County Data and exported into '.csv' format

Data Source:

More information about the source of Data can be found at the URL below: US Census Bureau. (n.d.). About: Census Bureau API. Retrieved from Census.gov https://www.census.gov/data/developers/about.html

Final Word:

I hope this data helps you to create something beautiful, and awesome. I will be posting a lot more databases shortly, if I get more time from assignments, submissions, and Semester Projects 🧙🏼‍♂️. Good Luck.

Analyzing customers’ characteristics and giving the early warning of customer churn based on machine learning algorithms, can help enterprises provide targeted marketing strategies and personalized services, and save a lot of operating costs. Data cleaning, oversampling, data standardization and other preprocessing operations are done on 900,000 telecom customer personal characteristics and historical behavior data set based on Python language. Appropriate model parameters were selected to build BPNN (Back Propagation Neural Network). Random Forest (RF) and Adaboost, the two classic ensemble learning models were introduced, and the Adaboost dual-ensemble learning model with RF as the base learner was put forward. The four models and the other four classical machine learning models-decision tree, naive Bayes, K-Nearest Neighbor (KNN), Support Vector Machine (SVM) were utilized respectively to analyze the customer churn data. The results show that the four models have better performance in terms of recall rate, precision rate, F1 score and other indicators, and the RF-Adaboost dual-ensemble model has the best performance. Among them, the recall rates of BPNN, RF, Adaboost and RF-Adaboost dual-ensemble model on positive samples are respectively 79%, 90%, 89%,93%, the precision rates are 97%, 99%, 98%, 99%, and the F1 scores are 87%, 95%, 94%, 96%. The RF-Adaboost dual-ensemble model has the best performance, and the three indicators are 10%, 1%, and 6% higher than the reference. The prediction results of customer churn provide strong data support for telecom companies to adopt appropriate retention strategies for pre-churn customers and reduce customer churn.

Making Byzantine Computational Musicology FAIR - a working example This is the repository for the Making Byzantine Computational Musicology FAIR - a working example project. We have submitted a short paper for this. In this repository, there is a folder with the dataset, the data package schemas in YAML file, as well as the python code (main.py) for describing and validating the data. Upon acceptance of the paper, the accepted draft will also be uploaded.

Data set consisting of data joined for analyzing the SBIR/STTR program. Data consists of individual awards and agency-level observations. The R and python code required for pulling, cleaning, and creating useful data sets has been included. Allard_Get and Clean Data.R This file provides the code for getting, cleaning, and joining the numerous data sets that this project combined. This code is written in the R language and can be used in any R environment running R 3.5.1 or higher. If the other files in this Dataverse are downloaded to the working directory, then this Rcode will be able to replicate the original study without needing the user to update any file paths. Allard SBIR STTR WebScraper.py This is the code I deployed to multiple Amazon EC2 instances to scrape data o each individual award in my data set, including the contact info and DUNS data. Allard_Analysis_APPAM SBIR project Forthcoming Allard_Spatial Analysis Forthcoming Awards_SBIR_df.Rdata This unique data set consists of 89,330 observations spanning the years 1983 - 2018 and accounting for all eleven SBIR/STTR agencies. This data set consists of data collected from the Small Business Administration's Awards API and also unique data collected through web scraping by the author. Budget_SBIR_df.Rdata 246 observations for 20 agencies across 25 years of their budget-performance in the SBIR/STTR program. Data was collected from the Small Business Administration using the Annual Reports Dashboard, the Awards API, and an author-designed web crawler of the websites of awards. Solicit_SBIR-df.Rdata This data consists of observations of solicitations published by agencies for the SBIR program. This data was collected from the SBA Solicitations API. Primary Sources Small Business Administration. “Annual Reports Dashboard,” 2018. https://www.sbir.gov/awards/annual-reports. Small Business Administration. “SBIR Awards Data,” 2018. https://www.sbir.gov/api. Small Business Administration. “SBIR Solicit Data,” 2018. https://www.sbir.gov/api.

Part of the dissertation Pitch of Voiced Speech in the Short-Time Fourier Transform: Algorithms, Ground Truths, and Evaluation Methods.© 2020, Bastian Bechtold. All rights reserved. Estimating the fundamental frequency of speech remains an active area of research, with varied applications in speech recognition, speaker identification, and speech compression. A vast number of algorithms for estimatimating this quantity have been proposed over the years, and a number of speech and noise corpora have been developed for evaluating their performance. The present dataset contains estimated fundamental frequency tracks of 25 algorithms, six speech corpora, two noise corpora, at nine signal-to-noise ratios between -20 and 20 dB SNR, as well as an additional evaluation of synthetic harmonic tone complexes in white noise.The dataset also contains pre-calculated performance measures both novel and traditional, in reference to each speech corpus’ ground truth, the algorithms’ own clean-speech estimate, and our own consensus truth. It can thus serve as the basis for a comparison study, or to replicate existing studies from a larger dataset, or as a reference for developing new fundamental frequency estimation algorithms. All source code and data is available to download, and entirely reproducible, albeit requiring about one year of processor-time.Included Code and Data

ground truth data.zip is a JBOF dataset of fundamental frequency estimates and ground truths of all speech files in the following corpora:

CMU-ARCTIC (consensus truth) [1]FDA (corpus truth and consensus truth) [2]KEELE (corpus truth and consensus truth) [3]MOCHA-TIMIT (consensus truth) [4]PTDB-TUG (corpus truth and consensus truth) [5]TIMIT (consensus truth) [6]

noisy speech data.zip is a JBOF datasets of fundamental frequency estimates of speech files mixed with noise from the following corpora:NOISEX [7]QUT-NOISE [8]

synthetic speech data.zip is a JBOF dataset of fundamental frequency estimates of synthetic harmonic tone complexes in white noise.noisy_speech.pkl and synthetic_speech.pkl are pickled Pandas dataframes of performance metrics derived from the above data for the following list of fundamental frequency estimation algorithms:AUTOC [9]AMDF [10]BANA [11]CEP [12]CREPE [13]DIO [14]DNN [15]KALDI [16]MAPSMBSC [17]NLS [18]PEFAC [19]PRAAT [20]RAPT [21]SACC [22]SAFE [23]SHR [24]SIFT [25]SRH [26]STRAIGHT [27]SWIPE [28]YAAPT [29]YIN [30]

noisy speech evaluation.py and synthetic speech evaluation.py are Python programs to calculate the above Pandas dataframes from the above JBOF datasets. They calculate the following performance measures:Gross Pitch Error (GPE), the percentage of pitches where the estimated pitch deviates from the true pitch by more than 20%.Fine Pitch Error (FPE), the mean error of grossly correct estimates.High/Low Octave Pitch Error (OPE), the percentage pitches that are GPEs and happens to be at an integer multiple of the true pitch.Gross Remaining Error (GRE), the percentage of pitches that are GPEs but not OPEs.Fine Remaining Bias (FRB), the median error of GREs.True Positive Rate (TPR), the percentage of true positive voicing estimates.False Positive Rate (FPR), the percentage of false positive voicing estimates.False Negative Rate (FNR), the percentage of false negative voicing estimates.F₁, the harmonic mean of precision and recall of the voicing decision.

Pipfile is a pipenv-compatible pipfile for installing all prerequisites necessary for running the above Python programs.

The Python programs take about an hour to compute on a fast 2019 computer, and require at least 32 Gb of memory.References:

John Kominek and Alan W Black. CMU ARCTIC database for speech synthesis, 2003.Paul C Bagshaw, Steven Hiller, and Mervyn A Jack. Enhanced Pitch Tracking and the Processing of F0 Contours for Computer Aided Intonation Teaching. In EUROSPEECH, 1993.F Plante, Georg F Meyer, and William A Ainsworth. A Pitch Extraction Reference Database. In Fourth European Conference on Speech Communication and Technology, pages 837–840, Madrid, Spain, 1995.Alan Wrench. MOCHA MultiCHannel Articulatory database: English, November 1999.Gregor Pirker, Michael Wohlmayr, Stefan Petrik, and Franz Pernkopf. A Pitch Tracking Corpus with Evaluation on Multipitch Tracking Scenario. page 4, 2011.John S. Garofolo, Lori F. Lamel, William M. Fisher, Jonathan G. Fiscus, David S. Pallett, Nancy L. Dahlgren, and Victor Zue. TIMIT Acoustic-Phonetic Continuous Speech Corpus, 1993.Andrew Varga and Herman J.M. Steeneken. Assessment for automatic speech recognition: II. NOISEX-92: A database and an experiment to study the effect of additive noise on speech recog- nition systems. Speech Communication, 12(3):247–251, July 1993.David B. Dean, Sridha Sridharan, Robert J. Vogt, and Michael W. Mason. The QUT-NOISE-TIMIT corpus for the evaluation of voice activity detection algorithms. Proceedings of Interspeech 2010, 2010.Man Mohan Sondhi. New methods of pitch extraction. Audio and Electroacoustics, IEEE Transactions on, 16(2):262—266, 1968.Myron J. Ross, Harry L. Shaffer, Asaf Cohen, Richard Freudberg, and Harold J. Manley. Average magnitude difference function pitch extractor. Acoustics, Speech and Signal Processing, IEEE Transactions on, 22(5):353—362, 1974.Na Yang, He Ba, Weiyang Cai, Ilker Demirkol, and Wendi Heinzelman. BaNa: A Noise Resilient Fundamental Frequency Detection Algorithm for Speech and Music. IEEE/ACM Transactions on Audio, Speech, and Language Processing, 22(12):1833–1848, December 2014.Michael Noll. Cepstrum Pitch Determination. The Journal of the Acoustical Society of America, 41(2):293–309, 1967.Jong Wook Kim, Justin Salamon, Peter Li, and Juan Pablo Bello. CREPE: A Convolutional Representation for Pitch Estimation. arXiv:1802.06182 [cs, eess, stat], February 2018. arXiv: 1802.06182.Masanori Morise, Fumiya Yokomori, and Kenji Ozawa. WORLD: A Vocoder-Based High-Quality Speech Synthesis System for Real-Time Applications. IEICE Transactions on Information and Systems, E99.D(7):1877–1884, 2016.Kun Han and DeLiang Wang. Neural Network Based Pitch Tracking in Very Noisy Speech. IEEE/ACM Transactions on Audio, Speech, and Language Processing, 22(12):2158–2168, Decem- ber 2014.Pegah Ghahremani, Bagher BabaAli, Daniel Povey, Korbinian Riedhammer, Jan Trmal, and Sanjeev Khudanpur. A pitch extraction algorithm tuned for automatic speech recognition. In Acoustics, Speech and Signal Processing (ICASSP), 2014 IEEE International Conference on, pages 2494–2498. IEEE, 2014.Lee Ngee Tan and Abeer Alwan. Multi-band summary correlogram-based pitch detection for noisy speech. Speech Communication, 55(7-8):841–856, September 2013.Jesper Kjær Nielsen, Tobias Lindstrøm Jensen, Jesper Rindom Jensen, Mads Græsbøll Christensen, and Søren Holdt Jensen. Fast fundamental frequency estimation: Making a statistically efficient estimator computationally efficient. Signal Processing, 135:188–197, June 2017.Sira Gonzalez and Mike Brookes. PEFAC - A Pitch Estimation Algorithm Robust to High Levels of Noise. IEEE/ACM Transactions on Audio, Speech, and Language Processing, 22(2):518—530, February 2014.Paul Boersma. Accurate short-term analysis of the fundamental frequency and the harmonics-to-noise ratio of a sampled sound. In Proceedings of the institute of phonetic sciences, volume 17, page 97—110. Amsterdam, 1993.David Talkin. A robust algorithm for pitch tracking (RAPT). Speech coding and synthesis, 495:518, 1995.Byung Suk Lee and Daniel PW Ellis. Noise robust pitch tracking by subband autocorrelation classification. In Interspeech, pages 707–710, 2012.Wei Chu and Abeer Alwan. SAFE: a statistical algorithm for F0 estimation for both clean and noisy speech. In INTERSPEECH, pages 2590–2593, 2010.Xuejing Sun. Pitch determination and voice quality analysis using subharmonic-to-harmonic ratio. In Acoustics, Speech, and Signal Processing (ICASSP), 2002 IEEE International Conference on, volume 1, page I—333. IEEE, 2002.Markel. The SIFT algorithm for fundamental frequency estimation. IEEE Transactions on Audio and Electroacoustics, 20(5):367—377, December 1972.Thomas Drugman and Abeer Alwan. Joint Robust Voicing Detection and Pitch Estimation Based on Residual Harmonics. In Interspeech, page 1973—1976, 2011.Hideki Kawahara, Masanori Morise, Toru Takahashi, Ryuichi Nisimura, Toshio Irino, and Hideki Banno. TANDEM-STRAIGHT: A temporally stable power spectral representation for periodic signals and applications to interference-free spectrum, F0, and aperiodicity estimation. In Acous- tics, Speech and Signal Processing, 2008. ICASSP 2008. IEEE International Conference on, pages 3933–3936. IEEE, 2008.Arturo Camacho. SWIPE: A sawtooth waveform inspired pitch estimator for speech and music. PhD thesis, University of Florida, 2007.Kavita Kasi and Stephen A. Zahorian. Yet Another Algorithm for Pitch Tracking. In IEEE International Conference on Acoustics Speech and Signal Processing, pages I–361–I–364, Orlando, FL, USA, May 2002. IEEE.Alain de Cheveigné and Hideki Kawahara. YIN, a fundamental frequency estimator for speech and music. The Journal of the Acoustical Society of America, 111(4):1917, 2002.

This is the supplementary material accompanying the manuscript "Daily life in the Open Biologist’s second job, as a Data Curator", published in Wellcome Open Research.

It contains:

- Python_scripts.zip: Python scripts used for data cleaning and organization:

-add_headers.py: adds specified headers automatically to a list of csv files, creating new output files containing a "_with_headers" suffix.

-count_NaN_values.py: counts the total number of rows containing null values in a csv file and prints the location of null values in the (row, column) format.

-remove_rowsNaN_file.py: removes rows containing null values in a single csv file and saves the modified file with a "_dropNaN" suffix.

-remove_rowsNaN_list.py: removes rows containing null values in list of csv files and saves the modified files with a "_dropNaN" suffix.

- README_template.txt: a template for a README file to be used to describe and accompany a dataset.

- template_for_source_data_information.xlsx: a spreadsheet to help manuscript authors to keep track of data used for each figure (e.g., information about data location and links to dataset description).

- Supplementary_Figure_1.tif: Example of a dataset shared by us on Zenodo. The elements that make the dataset FAIR are indicated by the respective letters. Findability (F) is achieved by the dataset unique and persistent identifier (DOI), as well as by the related identifiers for the publication and dataset on GitHub. Additionally, the dataset is described with rich metadata, (e.g., keywords). Accessibility (A) is achieved by the ease of visualization and downloading using a standardised communications protocol (https). Also, the metadata are publicly accessible and licensed under the public domain. Interoperability (I) is achieved by the open formats used (CSV; R), and metadata are harvestable using the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH), a low-barrier mechanism for repository interoperability. Reusability (R) is achieved by the complete description of the data with metadata in README files and links to the related publication (which contains more detailed information, as well as links to protocols on protocols.io). The dataset has a clear and accessible data usage license (CC-BY 4.0).

About this webinar Programming is becoming more and more popular, with many researchers using programming to perform data cleaning, data manipulation, data analytics, as well as creating publication quality plots. Programming can be really beneficial for automating processes and workflows. In this webinar, we are exploring four of the most popular programming languages that are widely used in academia, namely Python, R, MATLAB, and Julia. Webinar Topics Why use Programming An overview of Python, R, MATLAB, and Julia Code comparison of the four programming languages Popularity and job opportunities Intersect’s comparison General guidelines on how to choose the best programming language for your research Licence Copyright © 2021 Intersect Australia Ltd. All rights reserved.

GovReport Summarization - 8192 tokens

ccdv/govreport-summarization with the changes of: data cleaned with the clean-text python package total tokens for each column computed and added in new columns according to the long-t5 tokenizer (done after cleaning)

  train info

RangeIndex: 8200 entries, 0 to 8199 Data columns (total 4 columns): # Column Non-Null Count Dtype

0 report 8200 non-null… See the full description on the dataset page: https://huggingface.co/datasets/pszemraj/govreport-summarization-8192.

This dataset and documentation contains detailed information of the iTEM Open Database, a harmonized transport data set of historical values, 1970 - present. It aims to create transparency through two key features:

• Open-Data: Assembling a comprehensive collection of publicly-available transportation data
• Open-Code: All code and documentation will be publicly accessible and open for modification and extension. https://github.com/transportenergy

The iTEM Open Database is comprised of individual datasets collected from public sources. Each dataset is downloaded, cleaned, and harmonised to the common region and technology definitions defined by the iTEM consortium https://transportenergy.org. For each dataset, we describe the name of the dataset, the web link to the original source, the web link to the cleaning script (in python), variables, and explain the data cleaning steps (which explains the data cleaning script in plain English).

Shall you find any problems with the dataset, please report the issues here https://github.com/transportenergy/database/issues.

These datasets contain cleaned data survey results from the October 2021-January 2022 survey titled "The Impact of COVID-19 on Technical Services Units". This data was gathered from a Qualtrics survey, which was anonymized to prevent Qualtrics from gathering identifiable information from respondents. These specific iterations of data reflect cleaning and standardization so that data can be analyzed using Python. Ultimately, the three files reflect the removal of survey begin/end times, other data auto-recorded by Qualtrics, blank rows, blank responses after question four (the first section of the survey), and non-United States responses. Note that State names for "What state is your library located in?" (Q36) were also standardized beginning in Impact_of_COVID_on_Tech_Services_Clean_3.csv to aid in data analysis. In this step, state abbreviations were spelled out and spelling errors were corrected.

Alinaghi, N., Giannopoulos, I., Kattenbeck, M., & Raubal, M. (2025). Decoding wayfinding: analyzing wayfinding processes in the outdoor environment. International Journal of Geographical Information Science, 1–31. https://doi.org/10.1080/13658816.2025.2473599 Link to the paper: https://www.tandfonline.com/doi/full/10.1080/13658816.2025.2473599 Folder Structure The folder named “submission” contains the following: “pythonProject”: This folder contains all the Python files and subfolders needed for analysis. ijgis.yml: This file lists all the Python libraries and dependencies required to run the code. Setting Up the Environment Use the ijgis.yml file to create a Python project and environment. Ensure you activate the environment before running the code. The pythonProject folder contains several .py files and subfolders, each with specific functionality as described below. Subfolders 1. Data_4_IJGIS This folder contains the data used for the results reported in the paper. Note: The data analysis that we explain in this paper already begins with the synchronization and cleaning of the recorded raw data. The published data is already synchronized and cleaned. Both the cleaned files and the merged files with features extracted for them are given in this directory. If you want to perform the segmentation and feature extraction yourself, you should run the respective Python files yourself. If not, you can use the “merged_…csv” files as input for the training.

General Information

1. Title of Dataset

Hyperreal Talk (Polish clear web message board) messages data.

1. Data Collectors

Haitao Shi (The University of Edinburgh, UK); Leszek Świeca (Kazimierz Wielki University in Bydgoszcz, Poland).

1. Funding Information

The dataset is part of the research supported by the Polish National Science Centre (Narodowe Centrum Nauki) grant 2021/43/B/HS6/00710.

Project title: “Rhizomatic networks, circulation of meanings and contents, and offline contexts of online drug trade” (2022-2025; PLN 956 620; funding institution: Polish National Science Centre [NCN], call: OPUS 22; Principal Investigator: Piotr Siuda [Kazimierz Wielki University in Bydgoszcz, Poland]).

Data Collection Context

1. Data Source

Polish clear web message board called Hyperreal Talk (https://hyperreal.info/talk/).

1. Purpose

This dataset was developed within the abovementioned project. The project delves into internet dynamics within disruptive activities, specifically focusing on the online drug trade in Poland. It aims to (1) examine the utilization of the open internet, including social media, in the drug trade; (2) delineate the role of darknet environments in narcotics distribution; and (3) uncover the intricate flow of drug trade-related content and its meanings between the open web and the darknet, and how these meanings are shaped within the so-called drug subculture.

The Hyperreal Talk forum emerges as a pivotal online space on the Polish internet, serving as a hub for discussions and the exchange of knowledge and experiences concerning drug use. It plays a crucial role in investigating the narratives and discourses that shape the drug subculture and the broader societal perceptions of drug consumption. The dataset has been instrumental in conducting analyses pertinent to the earlier project goals.

1. Collection Method

The dataset was compiled using the Scrapy framework, a web crawling and scraping library for Python. This tool facilitated systematic content extraction from the targeted message board.

1. Collection Date

The data was collected in two periods, i.e., in September 2023 and November 2023.

Data Content

1. Data Description

The dataset comprises all messages posted on the Polish-language Hyperreal Talk message board from its inception until November 2023. These messages include the initial posts that start each thread and the subsequent posts (replies) within those threads. The dataset is organized into two directories: “hyperreal” and “hyperreal_hidden.” The “hyperreal” directory contains accessible posts without needing to log in to Hyperreal Talk, while the “hyperreal_hidden” directory holds posts that can only be viewed by logged-in users. For each directory, a .txt file has been prepared detailing the structure of the message board folders from which the posts were extracted. The dataset includes 6,248,842 posts.

1. Data Cleaning, Processing, and Anonymization

The data has been cleaned and processed using regular expressions in Python. Additionally, all personal information was removed through regular expressions. The data has been hashed to exclude all identifiers related to instant messaging apps and email addresses. Furthermore, all usernames appearing in messages have been eliminated.

1. File Formats and Variables/Fields

The dataset consists of the following files:

Zipped .txt files (hyperreal.zip) containing messages that are visible without logging into Hyperreal Talk. These files are organized into individual directories that mirror the folder structure found on the Hyperreal Talk message board.

Zipped .txt files (hyperreal_hidden.zip) containing messages that are visible only after logging into Hyperreal Talk. Similar to the first type, these files are organized into directories corresponding to the website’s folder structure.

A .csv file that lists all the messages, including file names and the content of each post.

Accessibility and Usage

1. Access Conditions

The data can be accessed without any restrictions.

1. Related Documentation

Attached are .txt files detailing the tree of folders for “hyperreal.zip” and “hyperreal_hidden.zip.”

Documentation on the Python regular expressions used for scraping, cleaning, processing, and anonymizing the data can be found on GitHub at the following URLs:

https://github.com/LeszekSwieca/Project_2021-43-B-HS6-00710

https://github.com/HaitaoShi/Scrapy_hyperreal"

Ethical Considerations

1. Ethics Statement

A set of data handling policies aimed at ensuring safety and ethics has been outlined in the following paper:

Harviainen, J.T., Haasio, A., Ruokolainen, T., Hassan, L., Siuda, P., Hamari, J. (2021). Information Protection in Dark Web Drug Markets Research [in:] Proceedings of the 54th Hawaii International Conference on System Sciences, HICSS 2021, Grand Hyatt Kauai, Hawaii, USA, 4-8 January 2021, Maui, Hawaii, (ed.) Tung X. Bui, Honolulu, HI, pp. 4673-4680.

The primary safeguard was the early-stage hashing of usernames and identifiers from the messages, utilizing automated systems for irreversible hashing. Recognizing that scraping and automatic name removal might not catch all identifiers, the data underwent manual review to ensure compliance with research ethics and thorough anonymization.