In this course, you will learn to work within the free and open-source R environment with a specific focus on working with and analyzing geospatial data. We will cover a wide variety of data and spatial data analytics topics, and you will learn how to code in R along the way. The Introduction module provides more background info about the course and course set up. This course is designed for someone with some prior GIS knowledge. For example, you should know the basics of working with maps, map projections, and vector and raster data. You should be able to perform common spatial analysis tasks and make map layouts. If you do not have a GIS background, we would recommend checking out the West Virginia View GIScience class. We do not assume that you have any prior experience with R or with coding. So, don't worry if you haven't developed these skill sets yet. That is a major goal in this course. Background material will be provided using code examples, videos, and presentations. We have provided assignments to offer hands-on learning opportunities. Data links for the lecture modules are provided within each module while data for the assignments are linked to the assignment buttons below. Please see the sequencing document for our suggested order in which to work through the material. After completing this course you will be able to: prepare, manipulate, query, and generally work with data in R. perform data summarization, comparisons, and statistical tests. create quality graphs, map layouts, and interactive web maps to visualize data and findings. present your research, methods, results, and code as web pages to foster reproducible research. work with spatial data in R. analyze vector and raster geospatial data to answer a question with a spatial component. make spatial models and predictions using regression and machine learning. code in the R language at an intermediate level.

Data files for the examples in the book Geographic Data Science in R: Visualizing and Analyzing Environmental Change by Michael C. Wimberly.

This data repository hosts datasets that are used for students to practice spatial operations introduced in R-as-GIS lectures and workshops.

This dataset was created to be used in my Capstone Project for the Google Data Analytics Professional Certificate. Data was web scraped from the state websites to combine the GIS information like FIPS, latitude, longitude, and County Codes by both number and Mailing Number.

RStudio was used for this web scrape and join. For details on how it was done you can go to the following link for my Github repository.

Feel free to follow my Github or LinkedIn profile to see what I end up doing with this Dataset.

Note: This LCMS CONUS Cause of Change image service has been deprecated. It has been replaced by the LCMS CONUS Annual Change image service, which provides updated and consolidated change data.Please refer to the new service here: https://usfs.maps.arcgis.com/home/item.html?id=085626ec50324e5e9ad6323c050ac84dThis product is part of the Landscape Change Monitoring System (LCMS) data suite. It shows LCMS change attribution classes for each year. See additional information about change in the Entity_and_Attribute_Information or Fields section below.LCMS is a remote sensing-based system for mapping and monitoring landscape change across the United States. Its objective is to develop a consistent approach using the latest technology and advancements in change detection to produce a "best available" map of landscape change. Because no algorithm performs best in all situations, LCMS uses an ensemble of models as predictors, which improves map accuracy across a range of ecosystems and change processes (Healey et al., 2018). The resulting suite of LCMS change, land cover, and land use maps offer a holistic depiction of landscape change across the United States over the past four decades.Predictor layers for the LCMS model include outputs from the LandTrendr and CCDC change detection algorithms and terrain information. These components are all accessed and processed using Google Earth Engine (Gorelick et al., 2017). To produce annual composites, the cFmask (Zhu and Woodcock, 2012), cloudScore, and TDOM (Chastain et al., 2019) cloud and cloud shadow masking methods are applied to Landsat Tier 1 and Sentinel 2a and 2b Level-1C top of atmosphere reflectance data. The annual medoid is then computed to summarize each year into a single composite. The composite time series is temporally segmented using LandTrendr (Kennedy et al., 2010; Kennedy et al., 2018; Cohen et al., 2018). All cloud and cloud shadow free values are also temporally segmented using the CCDC algorithm (Zhu and Woodcock, 2014). LandTrendr, CCDC and terrain predictors can be used as independent predictor variables in a Random Forest (Breiman, 2001) model. LandTrendr predictor variables include fitted values, pair-wise differences, segment duration, change magnitude, and slope. CCDC predictor variables include CCDC sine and cosine coefficients (first 3 harmonics), fitted values, and pairwise differences from the Julian Day of each pixel used in the annual composites and LandTrendr. Terrain predictor variables include elevation, slope, sine of aspect, cosine of aspect, and topographic position indices (Weiss, 2001) from the USGS 3D Elevation Program (3DEP) (U.S. Geological Survey, 2019). Reference data are collected using TimeSync, a web-based tool that helps analysts visualize and interpret the Landsat data record from 1984-present (Cohen et al., 2010).Outputs fall into three categories: change, land cover, and land use. Change relates specifically to vegetation cover and includes slow loss (not included for PRUSVI), fast loss (which also includes hydrologic changes such as inundation or desiccation), and gain. These values are predicted for each year of the time series and serve as the foundational products for LCMS. References: Breiman, L. (2001). Random Forests. In Machine Learning (Vol. 45, pp. 5-32). https://doi.org/10.1023/A:1010933404324Chastain, R., Housman, I., Goldstein, J., Finco, M., and Tenneson, K. (2019). Empirical cross sensor comparison of Sentinel-2A and 2B MSI, Landsat-8 OLI, and Landsat-7 ETM top of atmosphere spectral characteristics over the conterminous United States. In Remote Sensing of Environment (Vol. 221, pp. 274-285). https://doi.org/10.1016/j.rse.2018.11.012Cohen, W. B., Yang, Z., and Kennedy, R. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 2. TimeSync - Tools for calibration and validation. In Remote Sensing of Environment (Vol. 114, Issue 12, pp. 2911-2924). https://doi.org/10.1016/j.rse.2010.07.010Cohen, W. B., Yang, Z., Healey, S. P., Kennedy, R. E., and Gorelick, N. (2018). A LandTrendr multispectral ensemble for forest disturbance detection. In Remote Sensing of Environment (Vol. 205, pp. 131-140). https://doi.org/10.1016/j.rse.2017.11.015Foga, S., Scaramuzza, P.L., Guo, S., Zhu, Z., Dilley, R.D., Beckmann, T., Schmidt, G.L., Dwyer, J.L., Hughes, M.J., Laue, B. (2017). Cloud detection algorithm comparison and validation for operational Landsat data products. Remote Sensing of Environment, 194, 379-390. https://doi.org/10.1016/j.rse.2017.03.026Gorelick, N., Hancher, M., Dixon, M., Ilyushchenko, S., Thau, D., and Moore, R. (2017). Google Earth Engine: Planetary-scale geospatial analysis for everyone. In Remote Sensing of Environment (Vol. 202, pp. 18-27). https://doi.org/10.1016/j.rse.2017.06.031Healey, S. P., Cohen, W. B., Yang, Z., Kenneth Brewer, C., Brooks, E. B., Gorelick, N., Hernandez, A. J., Huang, C., Joseph Hughes, M., Kennedy, R. E., Loveland, T. R., Moisen, G. G., Schroeder, T. A., Stehman, S. V., Vogelmann, J. E., Woodcock, C. E., Yang, L., and Zhu, Z. (2018). Mapping forest change using stacked generalization: An ensemble approach. In Remote Sensing of Environment (Vol. 204, pp. 717-728). https://doi.org/10.1016/j.rse.2017.09.029Kennedy, R. E., Yang, Z., and Cohen, W. B. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 1. LandTrendr - Temporal segmentation algorithms. In Remote Sensing of Environment (Vol. 114, Issue 12, pp. 2897-2910). https://doi.org/10.1016/j.rse.2010.07.008Kennedy, R., Yang, Z., Gorelick, N., Braaten, J., Cavalcante, L., Cohen, W., and Healey, S. (2018). Implementation of the LandTrendr Algorithm on Google Earth Engine. In Remote Sensing (Vol. 10, Issue 5, p. 691). https://doi.org/10.3390/rs10050691Olofsson, P., Foody, G. M., Herold, M., Stehman, S. V., Woodcock, C. E., and Wulder, M. A. (2014). Good practices for estimating area and assessing accuracy of land change. In Remote Sensing of Environment (Vol. 148, pp. 42-57). https://doi.org/10.1016/j.rse.2014.02.015Pedregosa, F., Varoquaux, G., Gramfort, A., Michel, V., Thirion, B., Grisel, O., Blondel, M., Prettenhofer, P., Weiss, R., Dubourg, V., Vanderplas, J., Passos, A., Cournapeau, D., Brucher, M., Perrot, M. and Duchesnay, E. (2011). Scikit-learn: Machine Learning in Python. In Journal of Machine Learning Research (Vol. 12, pp. 2825-2830).Pengra, B. W., Stehman, S. V., Horton, J. A., Dockter, D. J., Schroeder, T. A., Yang, Z., Cohen, W. B., Healey, S. P., and Loveland, T. R. (2020). Quality control and assessment of interpreter consistency of annual land cover reference data in an operational national monitoring program. In Remote Sensing of Environment (Vol. 238, p. 111261). https://doi.org/10.1016/j.rse.2019.111261U.S. Geological Survey. (2019). USGS 3D Elevation Program Digital Elevation Model, accessed August 2022 at https://developers.google.com/earth-engine/datasets/catalog/USGS_3DEP_10mWeiss, A.D. (2001). Topographic position and landforms analysis Poster Presentation, ESRI Users Conference, San Diego, CAZhu, Z., and Woodcock, C. E. (2012). Object-based cloud and cloud shadow detection in Landsat imagery. In Remote Sensing of Environment (Vol. 118, pp. 83-94). https://doi.org/10.1016/j.rse.2011.10.028Zhu, Z., and Woodcock, C. E. (2014). Continuous change detection and classification of land cover using all available Landsat data. In Remote Sensing of Environment (Vol. 144, pp. 152-171). https://doi.org/10.1016/j.rse.2014.01.011This record was taken from the USDA Enterprise Data Inventory that feeds into the https://data.gov catalog. Data for this record includes the following resources: ISO-19139 metadata ArcGIS Hub Dataset ArcGIS GeoService For complete information, please visit https://data.gov.

This script is written for use with RStudio and was used for the demonstration in the Data & Donuts R for Geospatial Analysis workshop

This seminar is an applied study of deep learning methods for extracting information from geospatial data, such as aerial imagery, multispectral imagery, digital terrain data, and other digital cartographic representations. We first provide an introduction and conceptualization of artificial neural networks (ANNs). Next, we explore appropriate loss and assessment metrics for different use cases followed by the tensor data model, which is central to applying deep learning methods. Convolutional neural networks (CNNs) are then conceptualized with scene classification use cases. Lastly, we explore semantic segmentation, object detection, and instance segmentation. The primary focus of this course is semantic segmenation for pixel-level classification. The associated GitHub repo provides a series of applied examples. We hope to continue to add examples as methods and technologies further develop. These examples make use of a vareity of datasets (e.g., SAT-6, topoDL, Inria, LandCover.ai, vfillDL, and wvlcDL). Please see the repo for links to the data and associated papers. All examples have associated videos that walk through the process, which are also linked to the repo. A variety of deep learning architectures are explored including UNet, UNet++, DeepLabv3+, and Mask R-CNN. Currenlty, two examples use ArcGIS Pro and require no coding. The remaining five examples require coding and make use of PyTorch, Python, and R within the RStudio IDE. It is assumed that you have prior knowledge of coding in the Python and R enviroinments. If you do not have experience coding, please take a look at our Open-Source GIScience and Open-Source Spatial Analytics (R) courses, which explore coding in Python and R, respectively. After completing this seminar you will be able to: explain how ANNs work including weights, bias, activation, and optimization. describe and explain different loss and assessment metrics and determine appropriate use cases. use the tensor data model to represent data as input for deep learning. explain how CNNs work including convolutional operations/layers, kernel size, stride, padding, max pooling, activation, and batch normalization. use PyTorch, Python, and R to prepare data, produce and assess scene classification models, and infer to new data. explain common semantic segmentation architectures and how these methods allow for pixel-level classification and how they are different from traditional CNNs. use PyTorch, Python, and R (or ArcGIS Pro) to prepare data, produce and assess semantic segmentation models, and infer to new data.

The linked bookdown contains the notes and most exercises for a course on data analysis techniques in hydrology using the programming language R. The material will be updated each time the course is taught. If new topics are added, the topics they replace will remain, in case they are useful to others.

I hope these materials can be a resource to those teaching themselves R for hydrologic analysis and/or for instructors who may want to use a lesson or two or the entire course. At the top of each chapter there is a link to a github repository. In each repository is the code that produces each chapter and a version where the code chunks within it are blank. These repositories are all template repositories, so you can easily copy them to your own github space by clicking Use This Template on the repo page.

In my class, I work through the each document, live coding with students following along.Typically I ask students to watch as I code and explain the chunk and then replicate it on their computer. Depending on the lesson, I will ask students to try some of the chunks before I show them the code as an in-class activity. Some chunks are explicitly designed for this purpose and are typically labeled a “challenge.”

Chapters called ACTIVITY are either homework or class-period-long in-class activities. The code chunks in these are therefore blank. If you would like a key for any of these, please just send me an email.

If you have questions, suggestions, or would like activity answer keys, etc. please email me at jpgannon at vt.edu

Finally, if you use this resource, please fill out the survey on the first page of the bookdown (https://forms.gle/6Zcntzvr1wZZUh6S7). This will help me get an idea of how people are using this resource, how I might improve it, and whether or not I should continue to update it.

The Digital Geomorphic-GIS Map of Gulf Islands National Seashore (5-meter accuracy and 1-foot resolution 2006-2007 mapping), Mississippi and Florida is composed of GIS data layers and GIS tables, and is available in the following GRI-supported GIS data formats: 1.) a 10.1 file geodatabase (guis_geomorphology.gdb), a 2.) Open Geospatial Consortium (OGC) geopackage, and 3.) 2.2 KMZ/KML file for use in Google Earth, however, this format version of the map is limited in data layers presented and in access to GRI ancillary table information. The file geodatabase format is supported with a 1.) ArcGIS Pro map file (.mapx) file (guis_geomorphology.mapx) and individual Pro layer (.lyrx) files (for each GIS data layer), as well as with a 2.) 10.1 ArcMap (.mxd) map document (guis_geomorphology.mxd) and individual 10.1 layer (.lyr) files (for each GIS data layer). The OGC geopackage is supported with a QGIS project (.qgz) file. Upon request, the GIS data is also available in ESRI 10.1 shapefile format. Contact Stephanie O'Meara (see contact information below) to acquire the GIS data in these GIS data formats. In addition to the GIS data and supporting GIS files, three additional files comprise a GRI digital geologic-GIS dataset or map: 1.) A GIS readme file (guis_geology_gis_readme.pdf), 2.) the GRI ancillary map information document (.pdf) file (guis_geomorphology.pdf) which contains geologic unit descriptions, as well as other ancillary map information and graphics from the source map(s) used by the GRI in the production of the GRI digital geologic-GIS data for the park, and 3.) a user-friendly FAQ PDF version of the metadata (guis_geomorphology_metadata_faq.pdf). Please read the guis_geology_gis_readme.pdf for information pertaining to the proper extraction of the GIS data and other map files. Google Earth software is available for free at: https://www.google.com/earth/versions/. QGIS software is available for free at: https://www.qgis.org/en/site/. Users are encouraged to only use the Google Earth data for basic visualization, and to use the GIS data for any type of data analysis or investigation. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). For a complete listing of GRI products visit the GRI publications webpage: For a complete listing of GRI products visit the GRI publications webpage: https://www.nps.gov/subjects/geology/geologic-resources-inventory-products.htm. For more information about the Geologic Resources Inventory Program visit the GRI webpage: https://www.nps.gov/subjects/geology/gri,htm. At the bottom of that webpage is a "Contact Us" link if you need additional information. You may also directly contact the program coordinator, Jason Kenworthy (jason_kenworthy@nps.gov). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: U.S. Geological Survey. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (guis_geomorphology_metadata.txt or guis_geomorphology_metadata_faq.pdf). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:26,000 and United States National Map Accuracy Standards features are within (horizontally) 13.2 meters or 43.3 feet of their actual location as presented by this dataset. Users of this data should thus not assume the location of features is exactly where they are portrayed in Google Earth, ArcGIS, QGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: https://www.nps.gov/articles/gri-geodatabase-model.htm).

This repository contains two datasets:

1. An update of metadata analysis with data published before 2021 resulting from the search equation "TS = (Technosol* AND (Organic carbon OR Organic matter)" in the Web of Science (WOS) database. Update from Allory 2022: https://doi.org/10.24396/ORDAR-60.

2. A database containing geospatial datasets (inputs and outputs), R scripts, and other FOSS software files used for the geospatial analysis of land reclamation potential through Technosols in Brazil.

ObjectivesXinjiang is one of the high TB burden provinces of China. A spatial analysis was conducted using geographical information system (GIS) technology to improve the understanding of geographic variation of the pulmonary TB occurrence in Xinjiang, its predictors, and to search for targeted interventions.MethodsNumbers of reported pulmonary TB cases were collected at county/district level from TB surveillance system database. Population data were extracted from Xinjiang Statistical Yearbook (2006~2014). Spatial autocorrelation (or dependency) was assessed using global Moran’s I statistic. Anselin’s local Moran’s I and local Getis-Ord statistics were used to detect local spatial clusters. Ordinary least squares (OLS) regression, spatial lag model (SLM) and geographically-weighted regression (GWR) models were used to explore the socio-demographic predictors of pulmonary TB incidence from global and local perspectives. SPSS17.0, ArcGIS10.2.2, and GeoDA software were used for data analysis.ResultsIncidence of sputum smear positive (SS+) TB and new SS+TB showed a declining trend from 2005 to 2013. Pulmonary TB incidence showed a declining trend from 2005 to 2010 and a rising trend since 2011 mainly caused by the rising trend of sputum smear negative (SS-) TB incidence (p

This resource collects teaching materials that are originally created for the in-person course 'GEOSC/GEOG 497 – Data Mining in Environmental Sciences' at Penn State University (co-taught by Tao Wen, Susan Brantley, and Alan Taylor) and then refined/revised by Tao Wen to be used in the online teaching module 'Data Science in Earth and Environmental Sciences' hosted on the NSF-sponsored HydroLearn platform.

This resource includes both R Notebooks and Python Jupyter Notebooks to teach the basics of R and Python coding, data analysis and data visualization, as well as building machine learning models in both programming languages by using authentic research data and questions. All of these R/Python scripts can be executed either on the CUAHSI JupyterHub or on your local machine.

This resource is shared under the CC-BY license. Please contact the creator Tao Wen at Syracuse University (twen08@syr.edu) for any questions you have about this resource. If you identify any errors in the files, please contact the creator.

This dataset reflects reported incidents of crime (with the exception of murders where data exists for each victim) that occurred in the City of Chicago from 2001 to present, minus the most recent seven days. Data is extracted from the Chicago Police Department's CLEAR (Citizen Law Enforcement Analysis and Reporting) system. In order to protect the privacy of crime victims, addresses are shown at the block level only and specific locations are not identified. Should you have questions about this dataset, you may contact the Research & Development Division of the Chicago Police Department at 312.745.6071 or RandD@chicagopolice.org. Disclaimer: These crimes may be based upon preliminary information supplied to the Police Department by the reporting parties that have not been verified. The preliminary crime classifications may be changed at a later date based upon additional investigation and there is always the possibility of mechanical or human error. Therefore, the Chicago Police Department does not guarantee (either expressed or implied) the accuracy, completeness, timeliness, or correct sequencing of the information and the information should not be used for comparison purposes over time. The Chicago Police Department will not be responsible for any error or omission, or for the use of, or the results obtained from the use of this information. All data visualizations on maps should be considered approximate and attempts to derive specific addresses are strictly prohibited. The Chicago Police Department is not responsible for the content of any off-site pages that are referenced by or that reference this web page other than an official City of Chicago or Chicago Police Department web page. The user specifically acknowledges that the Chicago Police Department is not responsible for any defamatory, offensive, misleading, or illegal conduct of other users, links, or third parties and that the risk of injury from the foregoing rests entirely with the user. The unauthorized use of the words "Chicago Police Department," "Chicago Police," or any colorable imitation of these words or the unauthorized use of the Chicago Police Department logo is unlawful. This web page does not, in any way, authorize such use. Data is updated daily Tuesday through Sunday. The dataset contains more than 65,000 records/rows of data and cannot be viewed in full in Microsoft Excel. Therefore, when downloading the file, select CSV from the Export menu. Open the file in an ASCII text editor, such as Wordpad, to view and search. To access a list of Chicago Police Department - Illinois Uniform Crime Reporting (IUCR) codes, go to http://data.cityofchicago.org/Public-Safety/Chicago-Police-Department-Illinois-Uniform-Crime-R/c7ck-438e

Metal Earth progress update by Feltrin, L., Mogashoa, L.L., Ali, S.H., Haugaard, R., Jørgensen, T., Sherlock, R., Gibson, H. at Laurentian University. Presented at Metal Earth advisory meeting in March 2019.

Overview and Inspiration

I wanted to make some geospatial visualizations to convey the current severity of COVID19 in different parts of the U.S..

I liked the NYTimes COVID dataset, but it was lacking information on county boundary shape data, population per county, new cases / deaths per day, and per capita calculations, and county demographics.

After a lot of work tracking down the different data sources I wanted and doing all of the data wrangling and joins in python, I wanted to open-source the final enriched data set in order to give others a head start in their COVID-19 related analytic, modeling, and visualization efforts.

This dataset is enriched with county shapes, county center point coordinates, 2019 census population estimates, county population densities, cases and deaths per capita, and calculated per day cases / deaths metrics. It contains daily data per county back to January, allowing for analyizng changes over time.

UPDATE: I have also included demographic information per county, including ages, races, and gender breakdown. This could help determine which counties are most susceptible to an outbreak.

How this data can be used

Geospatial analysis and visualization - Which counties are currently getting hit the hardest (per capita and totals)? - What patterns are there in the spread of the virus across counties? (network based spread simulations using county center lat / lons) -county population densities play a role in how quickly the virus spreads? -how does a specific county/state cases and deaths compare to other counties/states? Join with other county level datasets easily (with fips code column)

Content Details

See the column descriptions for more details on the dataset

Visualizations and Analysis Examples

COVID-19 U.S. Time-lapse: Confirmed Cases per County (per capita)

https://github.com/ringhilterra/enriched-covid19-data/blob/master/example_viz/covid-cases-final-04-06.gif?raw=true" alt="">-

Other Data Notes

• Please review nytimes README for detailed notes on Covid-19 data - https://github.com/nytimes/covid-19-data/
• The only update I made in regards to 'Geographic Exceptions', is that I took 'New York City' county provided in the Covid-19 data, which has all cases for 'for the five boroughs of New York City (New York, Kings, Queens, Bronx and Richmond counties) and replaced the missing FIPS for those rows with the 'New York County' fips code 36061. That way I could join to a geometry, and then I used the sum of those five boroughs population estimates for the 'New York City' estimate, which allowed me calculate 'per capita' metrics for 'New York City' entries in the Covid-19 dataset

Acknowledgements

• Special thanks to NYTimes for all of their hard work gathering and consolidating all of the U.S. COVID19 related data on daily basis. Their git repo https://github.com/nytimes/covid-19-data/
• Also, thanks to ykzeng for the county population density estimates: https://github.com/ykzeng/covid-19/tree/master/data-

This collection of gridded data layers provides the extent of inundation in May 2020 resulting from the cyclone Amphan in 39 coastal districts in India and Bangladesh.

Input data:

These geospatial data layers are derived from Sentinel-1 dual-polarization C-band Synthetic Aperture Radar (SAR) data for pre-Amphan (May 5-18, 2020) and post-Amphan (May 22-30, 2020) periods. We accessed ready-to-use SAR data on Google Earth Engine (GEE). These input data were preprocessed using Ground Range Detected (GRD) border-noise removal, thermal noise removal, radiometric calibration, and terrain correction, to derive backscatter coefficients (σ°) in decibels (dB). We used VH polarisation instead of VV, since the latter is known to be affected by windy conditions as compared to VH.

Methods:

We developed a binary water/non-water classification scheme for the pre- and post-Amphan images using the automated Otsu thresholding approach that finds optimum threshold values based on clusters found in the histograms of pixel values. This analysis resulted in eight images: four each for pre-Amphan and post-Amphan periods (one each for coastal districts of Odisha and West Bengal and two for Bangladesh for each period). The pixels in these images have two values: 0 for non-water and 1 for water.

We then used a decision rule to identify areas that changed from ‘non-water’ to ‘water’ after the cyclone. The decision rule generated the ‘inundation layer’ with the permanent water bodies such as river, lakes, oceans and aquaculture masked out. This analysis resulted in four images, each with pixels with a value of 1 for inundated regions.

Data set format:

The spatial resolution of all the derived datasets is 10m. These georeferenced datasets are distributed in GEOTIFF format, and are compatible with GIS and/or image processing software, such as R and ArcGIS. The GIS-ready raster files can be used directly in mapping and geospatial analysis.

Data set for download:

A. Three data layers for Odisha, India:

OD_pre_binary.tif

OD_post_binary.tif

OD_inundation.tif

These data layers cover 10 districts: Baleshwar, Bhadrak, Cuttack, Jagatsinghpur, Jajpur, Kendrapara, Keonjhar, Khordha, Mayurbhanj and Puri.

B. Three data layers for West Bengal, India:

WB_pre_binary.tif

WB_post_binary.tif

WB_inundation.tif

These data layers cover 9 districts: Barddhaman, East Midnapore, Haora, Hugli, Kolkata, Nadia, North 24 Parganas, South 24 Parganas, and West Midnapore.

C. Six data layers for Bangladesh – three each for lower (L) region and upper (U) region.

BNG_L_pre_binary.tif

BNG_L_post_binary.tif

BNG_L_inundation.tif

BNG_U_pre_binary.tif

BNG_U_post_binary.tif

BNG_U_inundation.tif

The data layers for the lower region cover 11 districts: Bagerhat, Barguna, Barisal, Bhola, Jhalokati, Khulna, Lakshmipur, Noakhali, Patuakhali, Pirojpur, and Satkhira.

The data layers for the upper region cover 9 districts: Chuadanga, Jessore, Jhenaidah, Kushtia, Meherpur, Naogaon, Natore, Pabna, and Rajshahi.

**THIS NEWER 2016 DIGITAL MAP REPLACES THE OLDER 2014 VERSION OF THE GRI GATE Geomorphological-GIS data. The Unpublished Digital Pre-Hurricane Sandy Geomorphological-GIS Map of the Gateway National Recreation Area: Sandy Hook, Jamaica Bay and Staten Island Units, New Jersey and New York is composed of GIS data layers and GIS tables in a 10.1 file geodatabase (gate_geomorphology.gdb), a 10.1 ArcMap (.MXD) map document (gate_geomorphology.mxd), individual 10.1 layer (.LYR) files for each GIS data layer, an ancillary map information (.PDF) document (gate_geomorphology.pdf) which contains source map unit descriptions, as well as other source map text, figures and tables, metadata in FGDC text (.TXT) and FAQ (.HTML) formats, and a GIS readme file (gate_gis_readme.pdf). Please read the gate_gis_readme.pdf for information pertaining to the proper extraction of the file geodatabase and other map files. To request GIS data in ESRI 10.1 shapefile format contact Stephanie O’Meara (stephanie.omeara@colostate.edu; see contact information below). The data is also available as a 2.2 KMZ/KML file for use in Google Earth, however, this format version of the map is limited in data layers presented and in access to GRI ancillary table information. Google Earth software is available for free at: http://www.google.com/earth/index.html. Users are encouraged to only use the Google Earth data for basic visualization, and to use the GIS data for any type of data analysis or investigation. The data were completed as a component of the Geologic Resources Inventory (GRI) program, a National Park Service (NPS) Inventory and Monitoring (I&M) Division funded program that is administered by the NPS Geologic Resources Division (GRD). Source geologic maps and data used to complete this GRI digital dataset were provided by the following: Rutgers University Institute of Marine and Coastal Sciences. Detailed information concerning the sources used and their contribution the GRI product are listed in the Source Citation section(s) of this metadata record (gate_metadata_faq.html; available at http://nrdata.nps.gov/geology/gri_data/gis/gate/gate_pre-sandy_metadata_faq.html). Users of this data are cautioned about the locational accuracy of features within this dataset. Based on the source map scale of 1:6,000 and United States National Map Accuracy Standards features are within (horizontally) 5.08 meters or 16.67 feet of their actual location as presented by this dataset. Users of this data should thus not assume the location of features is exactly where they are portrayed in Google Earth, ArcGIS or other software used to display this dataset. All GIS and ancillary tables were produced as per the NPS GRI Geology-GIS Geodatabase Data Model v. 2.3. (available at: http://science.nature.nps.gov/im/inventory/geology/GeologyGISDataModel.cfm). The GIS data projection is NAD83, UTM Zone 18N, however, for the KML/KMZ format the data is projected upon export to WGS84 Geographic, the native coordinate system used by Google Earth. The data is within the area of interest of Gateway National Recreation Area.

This document contains an annotated set of data quality checks that participants report they use when evaluating and cleaning datasets. These items outline how participants are judging if the data suits their purpose.

This product is part of the Landscape Change Monitoring System (LCMS) data suite. It shows LCMS modeled land use classes for each year. See additional information about land use in the Entity_and_Attribute_Information section below.LCMS is a remote sensing-based system for mapping and monitoring landscape change across the United States. Its objective is to develop a consistent approach using the latest technology and advancements in change detection to produce a "best available" map of landscape change. Because no algorithm performs best in all situations, LCMS uses an ensemble of models as predictors, which improves map accuracy across a range of ecosystems and change processes (Healey et al., 2018). The resulting suite of LCMS change, land cover, and land use maps offer a holistic depiction of landscape change across the United States over the past four decades.Predictor layers for the LCMS model include annual Landsat and Sentinel 2 composites, outputs from the LandTrendr and CCDC change detection algorithms, and terrain information. These components are all accessed and processed using Google Earth Engine (Gorelick et al., 2017). To produce annual composites, the cFmask (Zhu and Woodcock 2012), cloudScore, and TDOM (Chastain et al., 2019) cloud and cloud shadow masking methods are applied to Landsat Tier 1 and Sentinel 2a and 2b Level-1C top of atmosphere reflectance data. The annual medoid is then computed to summarize each year into a single composite. The composite time series is temporally segmented using LandTrendr (Kennedy et al., 2010; Kennedy et al., 2018; Cohen et al., 2018). All cloud and cloud shadow free values are also temporally segmented using the CCDC algorithm (Zhu and Woodcock, 2014). The raw composite values, LandTrendr fitted values, pair-wise differences, segment duration, change magnitude, and slope, and CCDC September 1 sine and cosine coefficients (first 3 harmonics), fitted values, and pairwise differences, along with elevation, slope, sine of aspect, cosine of aspect, and topographic position indices (Weiss, 2001) from the National Elevation Dataset (NED), are used as independent predictor variables in a Random Forest (Breiman, 2001) model. Reference data are collected using TimeSync, a web-based tool that helps analysts visualize and interpret the Landsat data record from 1984-present (Cohen et al., 2010).Outputs fall into three categories: change, land cover, and land use. Change relates specifically to vegetation cover and includes slow loss, fast loss (which also includes hydrologic changes such as inundation or desiccation), and gain. These values are predicted for each year of the Landsat time series and serve as the foundational products for LCMS.References:Breiman, L. (2001). Machine Learning (Vol. 45, Issue 3, pp. 261-277). https://doi.org/10.1023/a:1017934522171 Chastain, R., Housman, I., Goldstein, J., Finco, M., and Tenneson, K. (2019). Empirical cross sensor comparison of Sentinel-2A and 2B MSI, Landsat-8 OLI, and Landsat-7 ETM top of atmosphere spectral characteristics over the conterminous United States. In Remote Sensing of Environment (Vol. 221, pp. 274-285). https://doi.org/10.1016/j.rse.2018.11.012 Cohen, W. B., Yang, Z., and Kennedy, R. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 2. TimeSync - Tools for calibration and validation. In Remote Sensing of Environment (Vol. 114, Issue 12, pp. 2911-2924). https://doi.org/10.1016/j.rse.2010.07.010 Cohen, W. B., Yang, Z., Healey, S. P., Kennedy, R. E., and Gorelick, N. (2018). A LandTrendr multispectral ensemble for forest disturbance detection. In Remote Sensing of Environment (Vol. 205, pp. 131-140). https://doi.org/10.1016/j.rse.2017.11.015Gorelick, N., Hancher, M., Dixon, M., Ilyushchenko, S., Thau, D., and Moore, R. (2017). Google Earth Engine: Planetary-scale geospatial analysis for everyone. In Remote Sensing of Environment (Vol. 202, pp. 18-27). https://doi.org/10.1016/j.rse.2017.06.031 Healey, S. P., Cohen, W. B., Yang, Z., Kenneth Brewer, C., Brooks, E. B., Gorelick, N., Hernandez, A. J., Huang, C., Joseph Hughes, M., Kennedy, R. E., Loveland, T. R., Moisen, G. G., Schroeder, T. A., Stehman, S. V., Vogelmann, J. E., Woodcock, C. E., Yang, L., and Zhu, Z. (2018). Mapping forest change using stacked generalization: An ensemble approach. In Remote Sensing of Environment (Vol. 204, pp. 717-728). https://doi.org/10.1016/j.rse.2017.09.029Kennedy, R. E., Yang, Z., and Cohen, W. B. (2010). Detecting trends in forest disturbance and recovery using yearly Landsat time series: 1. LandTrendr - Temporal segmentation algorithms. In Remote Sensing of Environment (Vol. 114, Issue 12, pp. 2897-2910). https://doi.org/10.1016/j.rse.2010.07.008Kennedy, R., Yang, Z., Gorelick, N., Braaten, J., Cavalcante, L., Cohen, W., and Healey, S. (2018). Implementation of the LandTrendr Algorithm on Google Earth Engine. In Remote Sensing (Vol. 10, Issue 5, p. 691). https://doi.org/10.3390/rs10050691Weiss, A.D. (2001). Topographic position and landforms analysis Poster Presentation, ESRI Users Conference, San Diego, CAZhu, Z., and Woodcock, C. E. (2012). Object-based cloud and cloud shadow detection in Landsat imagery. In Remote Sensing of Environment (Vol. 118, pp. 83-94). https://doi.org/10.1016/j.rse.2011.10.028Zhu, Z., and Woodcock, C. E. (2014). Continuous change detection and classification of land cover using all available Landsat data. In Remote Sensing of Environment (Vol. 144, pp. 152-171). https://doi.org/10.1016/j.rse.2014.01.011This record was taken from the USDA Enterprise Data Inventory that feeds into the https://data.gov catalog. Data for this record includes the following resources: ISO-19139 metadata ArcGIS Hub Dataset ArcGIS GeoServiceFor complete information, please visit https://data.gov.

This is a collection of all GPS- and computer-generated geospatial data specific to the Alpine Treeline Warming Experiment (ATWE), located on Niwot Ridge, Colorado, USA. The experiment ran between 2008 and 2016, and consisted of three sites spread across an elevation gradient. Geospatial data for all three experimental sites and cone/seed collection locations are included in this package. ––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––––– Geospatial files include cone collection, experimental site, seed trap, and other GPS location/terrain data. File types include ESRI shapefiles, ESRI grid files or Arc/Info binary grids, TIFFs (.tif), and keyhole markup language (.kml) files. Trimble-imported data include plain text files (.txt), Trimble COR (CorelDRAW) files, and Trimble SSF (Standard Storage Format) files. Microsoft Excel (.xlsx) and comma-separated values (.csv) files corresponding to the attribute tables of many files within this package are also included. A complete list of files can be found in this document in the “Data File Organization” section in the included Data User's Guide. Maps are also included in this data package for reference and use. These maps are separated into two categories, 2021 maps and legacy maps, which were made in 2010. Each 2021 map has one copy in portable network graphics (.png) format, and the other in .pdf format. All legacy maps are in .pdf format. .png image files can be opened with any compatible programs, such as Preview (Mac OS) and Photos (Windows). All GIS files were imported into geopackages (.gpkg) using QGIS, and double-checked for compatibility and data/attribute integrity using ESRI ArcGIS Pro. Note that files packaged within geopackages will open in ArcGIS Pro with “main.” preceding each file name, and an extra column named “geom” defining geometry type in the attribute table. The contents of each geospatial file remain intact, unless otherwise stated in “niwot_geospatial_data_list_07012021.pdf/.xlsx”. This list of files can be found as an .xlsx and a .pdf in this archive. As an open-source file format, files within gpkgs (TIFF, shapefiles, ESRI grid or “Arc/Info Binary”) can be read using both QGIS and ArcGIS Pro, and any other geospatial softwares. Text and .csv files can be read using TextEdit/Notepad/any simple text-editing software; .csv’s can also be opened using Microsoft Excel and R. .kml files can be opened using Google Maps or Google Earth, and Trimble files are most compatible with Trimble’s GPS Pathfinder Office software. .xlsx files can be opened using Microsoft Excel. PDFs can be opened using Adobe Acrobat Reader, and any other compatible programs. A selection of original shapefiles within this archive were generated using ArcMap with associated FGDC-standardized metadata (xml file format). We are including these original files because they contain metadata only accessible using ESRI programs at this time, and so that the relationship between shapefiles and xml files is maintained. Individual xml files can be opened (without a GIS-specific program) using TextEdit or Notepad. Since ESRI’s compatibility with FGDC metadata has changed since the generation of these files, many shapefiles will require upgrading to be compatible with ESRI’s latest versions of geospatial software. These details are also noted in the “niwot_geospatial_data_list_07012021” file.