The segment counts by social group and species or species group for the Waterfowl Breeding Population and Habitat Survey and associated segment effort information. Three data files are included with their associated metadata (html and xml formats). Segment counts are summed counts of waterfowl per segment and are separated into two files, described below, along with the effort table needed to analyze recent segment count information. wbphs_segment_counts_1955to1999_forDistribution.csv, which represents the period prior the collection of geolocated data. There is no associated effort file for these counts and segments with zero birds are included in the segment counts table, so effort can be inferred; there is no information to determine the proportion of each segment surveyed for this period and it must be presumed they were surveyed completely. Number of rows in table = 1,988,290. wbphs_segment_counts_forDistribution.csv, which contains positive segment records only, by species or species group beginning with 2000. wbphs_segment_effort_forDistribution.csv file is important for this segment counts file and can be used to infer zero value segments, by species or species group. Number of rows in table = 365,863. wbphs_segment_effort_forDistribution.csv. The segment survey effort and location from the Waterfowl Breeding Population and Habitat Survey beginning with 2000. If a segment was not flown, it is absent from the table for the corresponding year. Number of rows in table = 65,122. Also included here is a small R code file, createSingleSegmentCountTable.R, which can be run to format the 2000+ data to match the 1955-1999 format and combine the data over the two time periods. Please consult the metadata for an explanation of the fields and other information to understand the limitations of the data.
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This dataset is about book subjects. It has 3 rows and is filtered where the books is Learning R programming : become an efficient data scientist with R. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
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This dataset is about book publishers. It has 1 row and is filtered where the book publisher is R. Ralph. It features 5 columns: number of books published, authors, earliest publication date, and latest publication date.
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A collection of datasets and python scripts for extraction and analysis of isograms (and some palindromes and tautonyms) from corpus-based word-lists, specifically Google Ngram and the British National Corpus (BNC).Below follows a brief description, first, of the included datasets and, second, of the included scripts.1. DatasetsThe data from English Google Ngrams and the BNC is available in two formats: as a plain text CSV file and as a SQLite3 database.1.1 CSV formatThe CSV files for each dataset actually come in two parts: one labelled ".csv" and one ".totals". The ".csv" contains the actual extracted data, and the ".totals" file contains some basic summary statistics about the ".csv" dataset with the same name.The CSV files contain one row per data point, with the colums separated by a single tab stop. There are no labels at the top of the files. Each line has the following columns, in this order (the labels below are what I use in the database, which has an identical structure, see section below):
Label Data type Description
isogramy int The order of isogramy, e.g. "2" is a second order isogram
length int The length of the word in letters
word text The actual word/isogram in ASCII
source_pos text The Part of Speech tag from the original corpus
count int Token count (total number of occurences)
vol_count int Volume count (number of different sources which contain the word)
count_per_million int Token count per million words
vol_count_as_percent int Volume count as percentage of the total number of volumes
is_palindrome bool Whether the word is a palindrome (1) or not (0)
is_tautonym bool Whether the word is a tautonym (1) or not (0)
The ".totals" files have a slightly different format, with one row per data point, where the first column is the label and the second column is the associated value. The ".totals" files contain the following data:
Label
Data type
Description
!total_1grams
int
The total number of words in the corpus
!total_volumes
int
The total number of volumes (individual sources) in the corpus
!total_isograms
int
The total number of isograms found in the corpus (before compacting)
!total_palindromes
int
How many of the isograms found are palindromes
!total_tautonyms
int
How many of the isograms found are tautonyms
The CSV files are mainly useful for further automated data processing. For working with the data set directly (e.g. to do statistics or cross-check entries), I would recommend using the database format described below.1.2 SQLite database formatOn the other hand, the SQLite database combines the data from all four of the plain text files, and adds various useful combinations of the two datasets, namely:• Compacted versions of each dataset, where identical headwords are combined into a single entry.• A combined compacted dataset, combining and compacting the data from both Ngrams and the BNC.• An intersected dataset, which contains only those words which are found in both the Ngrams and the BNC dataset.The intersected dataset is by far the least noisy, but is missing some real isograms, too.The columns/layout of each of the tables in the database is identical to that described for the CSV/.totals files above.To get an idea of the various ways the database can be queried for various bits of data see the R script described below, which computes statistics based on the SQLite database.2. ScriptsThere are three scripts: one for tiding Ngram and BNC word lists and extracting isograms, one to create a neat SQLite database from the output, and one to compute some basic statistics from the data. The first script can be run using Python 3, the second script can be run using SQLite 3 from the command line, and the third script can be run in R/RStudio (R version 3).2.1 Source dataThe scripts were written to work with word lists from Google Ngram and the BNC, which can be obtained from http://storage.googleapis.com/books/ngrams/books/datasetsv2.html and [https://www.kilgarriff.co.uk/bnc-readme.html], (download all.al.gz).For Ngram the script expects the path to the directory containing the various files, for BNC the direct path to the *.gz file.2.2 Data preparationBefore processing proper, the word lists need to be tidied to exclude superfluous material and some of the most obvious noise. This will also bring them into a uniform format.Tidying and reformatting can be done by running one of the following commands:python isograms.py --ngrams --indir=INDIR --outfile=OUTFILEpython isograms.py --bnc --indir=INFILE --outfile=OUTFILEReplace INDIR/INFILE with the input directory or filename and OUTFILE with the filename for the tidied and reformatted output.2.3 Isogram ExtractionAfter preparing the data as above, isograms can be extracted from by running the following command on the reformatted and tidied files:python isograms.py --batch --infile=INFILE --outfile=OUTFILEHere INFILE should refer the the output from the previosu data cleaning process. Please note that the script will actually write two output files, one named OUTFILE with a word list of all the isograms and their associated frequency data, and one named "OUTFILE.totals" with very basic summary statistics.2.4 Creating a SQLite3 databaseThe output data from the above step can be easily collated into a SQLite3 database which allows for easy querying of the data directly for specific properties. The database can be created by following these steps:1. Make sure the files with the Ngrams and BNC data are named “ngrams-isograms.csv” and “bnc-isograms.csv” respectively. (The script assumes you have both of them, if you only want to load one, just create an empty file for the other one).2. Copy the “create-database.sql” script into the same directory as the two data files.3. On the command line, go to the directory where the files and the SQL script are. 4. Type: sqlite3 isograms.db 5. This will create a database called “isograms.db”.See the section 1 for a basic descript of the output data and how to work with the database.2.5 Statistical processingThe repository includes an R script (R version 3) named “statistics.r” that computes a number of statistics about the distribution of isograms by length, frequency, contextual diversity, etc. This can be used as a starting point for running your own stats. It uses RSQLite to access the SQLite database version of the data described above.
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Walking and running are mechanically and energetically different locomotion modes. For selecting one or another, speed is a parameter of paramount importance. Yet, both are likely controlled by similar low-dimensional neuronal networks that reflect in patterned muscle activations called muscle synergies. Here, we investigated how humans synergistically activate muscles during locomotion at different submaximal and maximal speeds. We analysed the duration and complexity (or irregularity) over time of motor primitives, the temporal components of muscle synergies. We found that the challenge imposed by controlling high-speed locomotion forces the central nervous system to produce muscle activation patterns that are wider and less complex relative to the duration of the gait cycle. The motor modules, or time-independent coefficients, were redistributed as locomotion speed changed. These outcomes show that robust locomotion control at challenging speeds is achieved by modulating the relative contribution of muscle activations and producing less complex and wider control signals, whereas slow speeds allow for more irregular control.
In this supplementary data set we made available: a) the metadata with anonymized participant information, b) the raw EMG, c) the touchdown and lift-off timings of the recorded limb, d) the filtered and time-normalized EMG, e) the muscle synergies extracted via NMF and f) the code to process the data, including the scripts to calculate the Higuchi's fractal dimension (HFD) of motor primitives. In total, 180 trials from 30 participants are included in the supplementary data set.
The file “metadata.dat” is available in ASCII and RData format and contains:
Code: the participant’s code
Group: the experimental group in which the participant was involved (G1 = walking and submaximal running; G2 = submaximal and maximal running)
Sex: the participant’s sex (M or F)
Speeds: the type of locomotion (W for walking or R for running) and speed at which the recordings were conducted in 10*[m/s]
Age: the participant’s age in years
Height: the participant’s height in [cm]
Mass: the participant’s body mass in [kg]
PB: 100 m-personal best time (for G2).
The "RAW_DATA.RData" R list consists of elements of S3 class "EMG", each of which is a human locomotion trial containing cycle segmentation timings and raw electromyographic (EMG) data from 13 muscles of the right-side leg. Cycle times are structured as data frames containing two columns that correspond to touchdown (first column) and lift-off (second column). Raw EMG data sets are also structured as data frames with one row for each recorded data point and 14 columns. The first column contains the incremental time in seconds. The remaining 13 columns contain the raw EMG data, named with the following muscle abbreviations: ME = gluteus medius, MA = gluteus maximus, FL = tensor fasciæ latæ, RF = rectus femoris, VM = vastus medialis, VL = vastus lateralis, ST = semitendinosus, BF = biceps femoris, TA = tibialis anterior, PL = peroneus longus, GM = gastrocnemius medialis, GL = gastrocnemius lateralis, SO = soleus. Please note that the following trials include less than 30 gait cycles (the actual number shown between parentheses): P16_R_83 (20), P16_R_95 (25), P17_R_28 (28), P17_R_83 (24), P17_R_95 (13), P18_R_95 (23), P19_R_95 (18), P20_R_28 (25), P20_R_42 (27), P20_R_95 (25), P22_R_28 (23), P23_R_28(29), P24_R_28 (28), P24_R_42 (29), P25_R_28 (29), P25_R_95 (28), P26_R_28 (29), P26_R_95 (28), P27_R_28 (28), P27_R_42 (29), P27_R_95 (24), P28_R_28 (29), P29_R_95 (17). All the other trials consist of 30 gait cycles. Trials are named like “P20_R_20,” where the characters “P20” indicate the participant number (in this example the 20th), the character “R” indicate the locomotion type (W=walking, R=running), and the numbers “20” indicate the locomotion speed in 10*m/s (in this case the speed is 2.0 m/s). The filtered and time-normalized emg data is named, following the same rules, like “FILT_EMG_P03_R_30”.
Old versions not compatible with the R package musclesyneRgies
The files containing the gait cycle breakdown are available in RData format, in the file named “CYCLE_TIMES.RData”. The files are structured as data frames with as many rows as the available number of gait cycles and two columns. The first column named “touchdown” contains the touchdown incremental times in seconds. The second column named “stance” contains the duration of each stance phase of the right foot in seconds. Each trial is saved as an element of a single R list. Trials are named like “CYCLE_TIMES_P20_R_20,” where the characters “CYCLE_TIMES” indicate that the trial contains the gait cycle breakdown times, the characters “P20” indicate the participant number (in this example the 20th), the character “R” indicate the locomotion type (W=walking, R=running), and the numbers “20” indicate the locomotion speed in 10*m/s (in this case the speed is 2.0 m/s). Please note that the following trials include less than 30 gait cycles (the actual number shown between parentheses): P16_R_83 (20), P16_R_95 (25), P17_R_28 (28), P17_R_83 (24), P17_R_95 (13), P18_R_95 (23), P19_R_95 (18), P20_R_28 (25), P20_R_42 (27), P20_R_95 (25), P22_R_28 (23), P23_R_28(29), P24_R_28 (28), P24_R_42 (29), P25_R_28 (29), P25_R_95 (28), P26_R_28 (29), P26_R_95 (28), P27_R_28 (28), P27_R_42 (29), P27_R_95 (24), P28_R_28 (29), P29_R_95 (17).
The files containing the raw, filtered and the normalized EMG data are available in RData format, in the files named “RAW_EMG.RData” and “FILT_EMG.RData”. The raw EMG files are structured as data frames with as many rows as the amount of recorded data points and 13 columns. The first column named “time” contains the incremental time in seconds. The remaining 12 columns contain the raw EMG data, named with muscle abbreviations that follow those reported above. Each trial is saved as an element of a single R list. Trials are named like “RAW_EMG_P03_R_30”, where the characters “RAW_EMG” indicate that the trial contains raw emg data, the characters “P03” indicate the participant number (in this example the 3rd), the character “R” indicate the locomotion type (see above), and the numbers “30” indicate the locomotion speed (see above). The filtered and time-normalized emg data is named, following the same rules, like “FILT_EMG_P03_R_30”.
The files containing the muscle synergies extracted from the filtered and normalized EMG data are available in RData format, in the files named “SYNS_H.RData” and “SYNS_W.RData”. The muscle synergies files are divided in motor primitives and motor modules and are presented as direct output of the factorisation and not in any functional order. Motor primitives are data frames with 6000 rows and a number of columns equal to the number of synergies (which might differ from trial to trial) plus one. The rows contain the time-dependent coefficients (motor primitives), one column for each synergy plus the time points (columns are named e.g. “time, Syn1, Syn2, Syn3”, where “Syn” is the abbreviation for “synergy”). Each gait cycle contains 200 data points, 100 for the stance and 100 for the swing phase which, multiplied by the 30 recorded cycles, result in 6000 data points distributed in as many rows. This output is transposed as compared to the one discussed in the methods section to improve user readability. Each set of motor primitives is saved as an element of a single R list. Trials are named like “SYNS_H_P12_W_07”, where the characters “SYNS_H” indicate that the trial contains motor primitive data, the characters “P12” indicate the participant number (in this example the 12th), the character “W” indicate the locomotion type (see above), and the numbers “07” indicate the speed (see above). Motor modules are data frames with 12 rows (number of recorded muscles) and a number of columns equal to the number of synergies (which might differ from trial to trial). The rows, named with muscle abbreviations that follow those reported above, contain the time-independent coefficients (motor modules), one for each synergy and for each muscle. Each set of motor modules relative to one synergy is saved as an element of a single R list. Trials are named like “SYNS_W_P22_R_20”, where the characters “SYNS_W” indicate that the trial contains motor module data, the characters “P22” indicate the participant number (in this example the 22nd), the character “W” indicates the locomotion type (see above), and the numbers “20” indicate the speed (see above). Given the nature of the NMF algorithm for the extraction of muscle synergies, the supplementary data set might show non-significant differences as compared to the one used for obtaining the results of this paper.
The files containing the HFD calculated from motor primitives are available in RData format, in the file named “HFD.RData”. HFD results are presented in a list of lists containing, for each trial, 1) the HFD, and 2) the interval time k used for the calculations. HFDs are presented as one number (mean HFD of the primitives for that trial), as are the interval times k. Trials are named like “HFD_P01_R_95”, where the characters “HFD” indicate that the trial contains HFD data, the characters “P01” indicate the participant number (in this example the 1st), the character “R” indicates the locomotion type (see above), and the numbers “95” indicate the speed (see above).
All the code used for the pre-processing of EMG data, the extraction of muscle synergies and the calculation of HFD is available in R format. Explanatory comments are profusely present throughout the script “muscle_synergies.R”.
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This dataset is about book series. It has 4 rows and is filtered where the authors is Susan R. Grayzel. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
R Analytical Tables: Tree and Stem These are 16 tables in R format, 8 tables in the tree format, one table per census, and 8 more in the stem format. They are named bci.tree1 through bci.tree8 and bci.stem1 through bci.stem8, with the number corresponding to a census. Every tree table includes a record for every tree appearing in the 50-ha plot across all censuses, with one row per tree and one table per census. Trees not yet censused and dead trees are included, allowing the fate of every tree to be tallied in every census. The rows in every tree table are in exactly the same order, so the 8 tree tables are effectively a single giant table, with columns for every one of the 8 censuses. They are divided into separate tables for easier access. Moreover, each individual census table is self-contained, and if a user needs only one census, then only that one census table is necessary. For most purposes the most recent, bci.tree8, should serve for a single census. The 8 stem tables form a parallel set having one row for every stem ever censused. In the tree tables, if stemID matches for a given tree in 2 censuses, then it is certain that the same stem was measured in both censuses. If the stemID differs between censuses, it often means that the first stem broke and a new stem was measured. However, in trees with 2 or more stems, it was not always possible to identify stems with certainty across censuses prior to 2010, because stem tags were not used. This means that there are cases where the stemID changes even though the stem(s) really did persist. The cleanest way to assess growth is to use only those cases where the stemID matches between censuses. It is also necessary to check the HOM (height-of-measurement) in case it changes between censuses. In the stem tables, records on matching rows are guaranteed to be the same stem, but the HOM might change. The 8 tree tables are zipped into the single file bci.tree.zip, and the 8 stem tables into bci.stem.zip. Columns in R Analytical Tables: Tree and Stem treeID: The unique tree identifier in the database. Guarantees a tree match. stemID: The unique stem identifier in the database. Guarantees a stem match. tag: Tag number on the tree (occasionally negative where a tag was duplicated by mistake). StemTag: Tag number on the individual stem, if present. sp: The species mnemonic. See the R Species Table for full Latin names. quadrat: Quadrat designation, as a 2-digit row number then 2-digit column number on a 20x20 m grid. gx: The x coordinate within the plot, meters from the west border of the plot, always in [0,1000). gy: The y coordinate, meters from the south border, always in [0,500). dbh: Diameter (mm) of one stem on the tree, the stem whose stemID is given. hom: The height-of-measure, meters above the ground, where the dbh was measured. ExactDate: The date on which a tree was measured. date: Integer date for easy calculation of time interval between censuses (the number of days since 1 Jan 1960). codes: The codes describing the measurement as recorded in the field. See Condit (1998) for a description of field codes. For analyses, status codes should be used, not field codes. status: A status code for the tree or stem. See the section below, Status Codes for Analyses. DFstatus: Alternate stem status, redundant relative to status. nostems: The number of living stems on the date of measurement. agb: Above-ground-biomass of all stems on the tree, in Mg (= metric tons), or for the individual stem. Note that agb=0 for dead trees. ba: Basal area of all stems on the tree, in square meters. Note that ba=0 for dead trees. Status Codes for Analyses These indicate whether a tree (stem) is alive (A) or dead (D), with some further complications. Status A=alive is assigned to a tree if it has any living stem or sprout. Status D=dead is only used when an entire tree is dead. A third status is P=prior, necessary because each of the analytical tables has a record for every tree (or stem). Thus, there must be records in early censuses for trees that recruited in later censuses, and these trees have status P. In a complete life cycle, a tree begins with status P, becomes A, then D; for many trees, the cycle includes only P to A, or A to D, or just A over all 8 censues. Additional status codes are necessary because a stem can be dead while the tree is still alive, and for rare cases where trees were missed during a census or recorded as dead once then later alive. Status Codes for Analyses (the status column in R Analytical Tables) A: Alive, applied to either the tree or stem. D: Dead, meaning the entire tree is dead, ie with no living stems or sprouts. P: Prior, applied to a tree (or stem) in censuses prior to its appearance in the plot. M: Missing, indicating that the tree was skipped by mistake during the census, so it could have been alive or dead. AD: A seldom-used code, applied when a tree was noted as d...
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Complete dataset of “Film Circulation on the International Film Festival Network and the Impact on Global Film Culture”
A peer-reviewed data paper for this dataset is in review to be published in NECSUS_European Journal of Media Studies - an open access journal aiming at enhancing data transparency and reusability, and will be available from https://necsus-ejms.org/ and https://mediarep.org
Please cite this when using the dataset.
Detailed description of the dataset:
1 Film Dataset: Festival Programs
The Film Dataset consists a data scheme image file, a codebook and two dataset tables in csv format.
The codebook (csv file “1_codebook_film-dataset_festival-program”) offers a detailed description of all variables within the Film Dataset. Along with the definition of variables it lists explanations for the units of measurement, data sources, coding and information on missing data.
The csv file “1_film-dataset_festival-program_long” comprises a dataset of all films and the festivals, festival sections, and the year of the festival edition that they were sampled from. The dataset is structured in the long format, i.e. the same film can appear in several rows when it appeared in more than one sample festival. However, films are identifiable via their unique ID.
The csv file “1_film-dataset_festival-program_wide” consists of the dataset listing only unique films (n=9,348). The dataset is in the wide format, i.e. each row corresponds to a unique film, identifiable via its unique ID. For easy analysis, and since the overlap is only six percent, in this dataset the variable sample festival (fest) corresponds to the first sample festival where the film appeared. For instance, if a film was first shown at Berlinale (in February) and then at Frameline (in June of the same year), the sample festival will list “Berlinale”. This file includes information on unique and IMDb IDs, the film title, production year, length, categorization in length, production countries, regional attribution, director names, genre attribution, the festival, festival section and festival edition the film was sampled from, and information whether there is festival run information available through the IMDb data.
2 Survey Dataset
The Survey Dataset consists of a data scheme image file, a codebook and two dataset tables in csv format.
The codebook “2_codebook_survey-dataset” includes coding information for both survey datasets. It lists the definition of the variables or survey questions (corresponding to Samoilova/Loist 2019), units of measurement, data source, variable type, range and coding, and information on missing data.
The csv file “2_survey-dataset_long-festivals_shared-consent” consists of a subset (n=161) of the original survey dataset (n=454), where respondents provided festival run data for films (n=206) and gave consent to share their data for research purposes. This dataset consists of the festival data in a long format, so that each row corresponds to the festival appearance of a film.
The csv file “2_survey-dataset_wide-no-festivals_shared-consent” consists of a subset (n=372) of the original dataset (n=454) of survey responses corresponding to sample films. It includes data only for those films for which respondents provided consent to share their data for research purposes. This dataset is shown in wide format of the survey data, i.e. information for each response corresponding to a film is listed in one row. This includes data on film IDs, film title, survey questions regarding completeness and availability of provided information, information on number of festival screenings, screening fees, budgets, marketing costs, market screenings, and distribution. As the file name suggests, no data on festival screenings is included in the wide format dataset.
3 IMDb & Scripts
The IMDb dataset consists of a data scheme image file, one codebook and eight datasets, all in csv format. It also includes the R scripts that we used for scraping and matching.
The codebook “3_codebook_imdb-dataset” includes information for all IMDb datasets. This includes ID information and their data source, coding and value ranges, and information on missing data.
The csv file “3_imdb-dataset_aka-titles_long” contains film title data in different languages scraped from IMDb in a long format, i.e. each row corresponds to a title in a given language.
The csv file “3_imdb-dataset_awards_long” contains film award data in a long format, i.e. each row corresponds to an award of a given film.
The csv file “3_imdb-dataset_companies_long” contains data on production and distribution companies of films. The dataset is in a long format, so that each row corresponds to a particular company of a particular film.
The csv file “3_imdb-dataset_crew_long” contains data on names and roles of crew members in a long format, i.e. each row corresponds to each crew member. The file also contains binary gender assigned to directors based on their first names using the GenderizeR application.
The csv file “3_imdb-dataset_festival-runs_long” contains festival run data scraped from IMDb in a long format, i.e. each row corresponds to the festival appearance of a given film. The dataset does not include each film screening, but the first screening of a film at a festival within a given year. The data includes festival runs up to 2019.
The csv file “3_imdb-dataset_general-info_wide” contains general information about films such as genre as defined by IMDb, languages in which a film was shown, ratings, and budget. The dataset is in wide format, so that each row corresponds to a unique film.
The csv file “3_imdb-dataset_release-info_long” contains data about non-festival release (e.g., theatrical, digital, tv, dvd/blueray). The dataset is in a long format, so that each row corresponds to a particular release of a particular film.
The csv file “3_imdb-dataset_websites_long” contains data on available websites (official websites, miscellaneous, photos, video clips). The dataset is in a long format, so that each row corresponds to a website of a particular film.
The dataset includes 8 text files containing the script for webscraping. They were written using the R-3.6.3 version for Windows.
The R script “r_1_unite_data” demonstrates the structure of the dataset, that we use in the following steps to identify, scrape, and match the film data.
The R script “r_2_scrape_matches” reads in the dataset with the film characteristics described in the “r_1_unite_data” and uses various R packages to create a search URL for each film from the core dataset on the IMDb website. The script attempts to match each film from the core dataset to IMDb records by first conducting an advanced search based on the movie title and year, and then potentially using an alternative title and a basic search if no matches are found in the advanced search. The script scrapes the title, release year, directors, running time, genre, and IMDb film URL from the first page of the suggested records from the IMDb website. The script then defines a loop that matches (including matching scores) each film in the core dataset with suggested films on the IMDb search page. Matching was done using data on directors, production year (+/- one year), and title, a fuzzy matching approach with two methods: “cosine” and “osa.” where the cosine similarity is used to match titles with a high degree of similarity, and the OSA algorithm is used to match titles that may have typos or minor variations.
The script “r_3_matching” creates a dataset with the matches for a manual check. Each pair of films (original film from the core dataset and the suggested match from the IMDb website was categorized in the following five categories: a) 100% match: perfect match on title, year, and director; b) likely good match; c) maybe match; d) unlikely match; and e) no match). The script also checks for possible doubles in the dataset and identifies them for a manual check.
The script “r_4_scraping_functions” creates a function for scraping the data from the identified matches (based on the scripts described above and manually checked). These functions are used for scraping the data in the next script.
The script “r_5a_extracting_info_sample” uses the function defined in the “r_4_scraping_functions”, in order to scrape the IMDb data for the identified matches. This script does that for the first 100 films, to check, if everything works. Scraping for the entire dataset took a few hours. Therefore, a test with a subsample of 100 films is advisable.
The script “r_5b_extracting_info_all” extracts the data for the entire dataset of the identified matches.
The script “r_5c_extracting_info_skipped” checks the films with missing data (where data was not scraped) and tried to extract data one more time to make sure that the errors were not caused by disruptions in the internet connection or other technical issues.
The script “r_check_logs” is used for troubleshooting and tracking the progress of all of the R scripts used. It gives information on the amount of missing values and errors.
4 Festival Library Dataset
The Festival Library Dataset consists of a data scheme image file, one codebook and one dataset, all in csv format.
The codebook (csv file “4_codebook_festival-library_dataset”) offers a detailed description of all variables within the Library Dataset. It lists the definition of variables, such as location and festival name, and festival categories, units of measurement, data sources and coding and missing data.
The csv file “4_festival-library_dataset_imdb-and-survey” contains data on all unique festivals collected from both IMDb and survey sources. This dataset appears in wide format, all information for each festival is listed in one row. This
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Background
Is the control of movement less stable when we walk or run in challenging settings? Intuitively, one might answer that it is, given that adding constraints to locomotion (e.g. rough terrain, age-related impairments, etc.) makes movements less stable. Here, we investigated how young and old humans synergistically activate muscles during locomotion when different perturbation levels are introduced. Of these control signals, called muscle synergies, we analyzed the stability over time. Surprisingly, we found that perturbations and older age force the central nervous system to produce muscle activation patterns that are more stable. These outcomes show that robust locomotion in challenging settings is achieved by increasing the stability of control signals, whereas easier tasks allow for more unstable control.
How to use the data set
This supplementary data set contains: a) the metadata with anonymized participant information, b) the raw electromyographic (EMG) data acquired during locomotion, c) the touchdown and lift-off timings of the recorded limb, d) the filtered and time-normalized EMG, e) the muscle synergies extracted via non-negative matrix factorization and f) the code written in R (R Found. for Stat. Comp.) to process the data, including the scripts to calculate the Maximum Lyapunov Exponents of motor primitives. In total, 476 trials from 86 participants are included in the supplementary data set.
The file “participant_data.dat” is available in ASCII and RData (R Found. for Stat. Comp.) format and contains:
The files containing the gait cycle breakdown are available in RData (R Found. for Stat. Comp.) format, in the file named “CYCLE_TIMES.RData”. The files are structured as data frames with 30 rows (one for each gait cycle) and two columns. The first column contains the touchdown incremental times in seconds. The second column contains the duration of each stance phase in seconds. Each trial is saved as an element of a single R list. Trials are named like “CYCLE_TIMES_P0020,” where the characters “CYCLE_TIMES” indicate that the trial contains the gait cycle breakdown times and the characters “P0020” indicate the participant number (in this example the 20th). Please note that the overground trials of participants P0001 and P0009 and the second uneven-surface running trial of participant P0048 only contain 22, 27 and 23 cycles, respectively.
The files containing the raw, filtered and the normalized EMG data are available in RData (R Found. for Stat. Comp.) format, in the files named “RAW_EMG.RData” and “FILT_EMG.RData”. The raw EMG files are structured as data frames with 30000 rows (one for each recorded data point) and 14 columns. The first column contains the incremental time in seconds. The remaining thirteen columns contain the raw EMG data, named with muscle abbreviations that follow those reported in the Materials and Methods section of this Supplementary Materials file. Each trial is saved as an element of a single R list. Trials are named like “RAW_EMG_P0053_OG_02”, where the characters “RAW_EMG” indicate that the trial contains raw emg data, the characters “P0053” indicate the participant number (in this example the 53rd), the characters “OW” indicate the locomotion type (E1: OW=overground walking, OR=overground running, TW=treadmill walking, TR=treadmill running; E2: EW=even-surface walking, ER=even-surface running, UW=uneven-surface walking, UR=uneven-surface running; E3: NW=normal walking, PW=perturbed walking), and the numbers “02” indicate the trial number (in this case the 2nd). The 10 trials per participant recorded for each overground session (i.e. 10 for walking and 10 for running) were concatenated into one. The filtered and time-normalized emg data is named, following the same rules, like “FILT_EMG_P0053_OG_02”.
The files containing the muscle synergies extracted from the filtered and normalized EMG data are available in RData (R Found. for Stat. Comp.) format, in the files named “SYNS_H.RData” and “SYNS_W.RData”. The muscle synergies files are divided in motor primitives and motor modules and are presented as direct output of the factorization and not in any functional order. Motor primitives are data frames with 6000 rows and a number of columns equal to the number of synergies (which might differ from trial to trial) plus one. The rows contain the time-dependent coefficients (motor primitives), one column for each synergy plus the time points (columns are named e.g. “Time, Syn1, Syn2, Syn3”, where “Syn” is the abbreviation for “synergy”). Each gait cycle contains 200 data points, 100 for the stance and 100 for the swing phase which, multiplied by the 30 recorded cycles, result in 6000 data points distributed in as many rows. This output is transposed as compared to the one discussed above to improve user readability. Each set of motor primitives is saved as an element of a single R list. Trials are named like “SYNS_H_P0012_PW_02”, where the characters “SYNS_H” indicate that the trial contains motor primitive data, the characters “P0012” indicate the participant number (in this example the 12th), ), the characters “PW” indicate the locomotion type (see above), and the numbers “02” indicate the trial number (in this case the 2nd). Motor modules are data frames with 13 rows (number of recorded muscles) and a number of columns equal to the number of synergies (which might differ from trial to trial). The rows, named with muscle abbreviations that follow those reported in the Materials and Methods section of this Supplementary Materials file, contain the time-independent coefficients (motor modules), one for each synergy and for each muscle. Each set of motor modules relative to one synergy is saved as an element of a single R list. Trials are named like “SYNS_W_P0082_PW_02”, where the characters “SYNS_W” indicate that the trial contains motor module data, the characters “P0082” indicate the participant number (in this example the 82nd) ), the characters “PW” indicate the locomotion type (see above), and the numbers “02” indicate the trial number (in this case the 2nd). Given the nature of the NMF algorithm for the extraction of muscle synergies, the supplementary data set might show non-significant differences as compared to the one used for obtaining the results of this paper.
The files containing the MLE calculated from motor primitives are available in RData (R Found. for Stat. Comp.) format, in the file named “MLE.RData”. MLE results are presented in a list of lists containing, for each trial, 1) the divergences, 2) the MLE, and 3) the value of the R2 between the divergence curve and its linear interpolation made using the specified amount of points. The divergences are presented as a one-dimensional vector. MLE are one number like the R2 value. Trials are named like “MLE_P0081_EW_01”, where the characters “MLE” indicate that the trial contains MLE data, the characters “P0081” indicate the participant number (in this example the 81st) ), the characters “EW” indicate the locomotion type (see above), and the numbers “01” indicate the trial number (in this case the 1st).
All the code used for the preprocessing of EMG data, the extraction of muscle synergies and the calculation of MLE is available in R (R Found. for Stat. Comp.) format. Explanatory comments are profusely present throughout the scripts (“SYNS.R”, which is the script to extract synergies, “fun_NMF.R”, which contains the NMF function, “MLE.R”, which is the script to calculate the MLE of motor primitives and “fun_MLE.R”, which contains the MLE function).
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The use of motorized treadmills as convenient tools for the study of locomotion has been in vogue for many decades. However, despite the widespread presence of these devices in many scientific and clinical environments, a full consensus on their validity to faithfully substitute free overground locomotion is still missing. Specifically, little information is available on whether and how the neural control of movement is affected when humans walk and run on a treadmill as compared to overground. Here, we made use of linear and nonlinear analysis tools to extract information from electromyographic recordings during walking and running overground and on an instrumented treadmill. We extracted synergistic activation patterns from the muscles of the lower limb via non-negative matrix factorization. We then investigated how the motor modules (or time-invariant muscle weightings) were used in the two locomotion environments. Subsequently, we examined the timing of motor primitives (or time-dependent coefficients of muscle synergies) by calculating their duration, the time of main activation, and their Hurst exponent, a nonlinear metric derived from fractal analysis. We found that motor modules were not influenced by the locomotion environment, while motor primitives resulted overall more regular in treadmill than in overground locomotion, with the main activity of the primitive for propulsion shifted earlier in time. Our results suggest that the spatial and sensory constraints imposed by the treadmill environment forced the central nervous system to adopt a different neural control strategy than that used for free overground locomotion. A data-driven indication that treadmills induce perturbations to the neural control of locomotion.
In this supplementary data set we made available: a) the metadata with anonymized participant information; b) the raw EMG, already concatenated for the overground trials; c) the touchdown and lift-off timings of the recorded limb, d) the filtered and time-normalized EMG; e) the muscle synergies extracted via NMF; f) the code to process the data. In total, 120 trials from 30 participants are included in the supplementary data set.
The file “metadata.dat” is available in ASCII and RData format and contains:
The "RAW_DATA.RData" R list consists of elements of S3 class "EMG", each of which is a human locomotion trial containing cycle segmentation timings and raw electromyographic (EMG) data from 13 muscles of the right-side leg. Cycle times are structured as data frames containing two columns that correspond to touchdown (first column) and lift-off (second column). Raw EMG data sets are also structured as data frames with one row for each recorded data point and 14 columns. The first column contains the incremental time in seconds. The remaining 13 columns contain the raw EMG data, named with the following muscle abbreviations: ME = gluteus medius, MA = gluteus maximus, FL = tensor fasciæ latæ, RF = rectus femoris, VM = vastus medialis, VL = vastus lateralis, ST = semitendinosus, BF = biceps femoris, TA = tibialis anterior, PL = peroneus longus, GM = gastrocnemius medialis, GL = gastrocnemius lateralis, SO = soleus. Please note that the running overground trials of participants P0001, P0007, P0008 and P0009 consist of 21, 29, 29 and 26 cycles, respectively. All the other trials consist of 30 gait cycles. Trials are named like “P0003_OR_01”, where the characters “P0003” indicate the participant number (in this example the 3rd), the characters “OR” indicate the locomotion type and environment (see above), and the numbers “01” indicate the trial number. The filtered and time-normalized emg data are named, following the same rules, like “FILT_EMG_P0003_OR_01”.
Old versions not compatible with the R package musclesyneRgies
The files containing the gait cycle breakdown are available in RData format, in the file named “CYCLE_TIMES.RData”. The files are structured as data frames with 30 rows (one for each gait cycle) and two columns. The first column contains the touchdown incremental times in seconds. The second column contains the duration of each stance phase in seconds. Each trial is saved as an element of a single R list. Trials are named like “CYCLE_TIMES_P0020_TW_01,” where the characters “CYCLE_TIMES” indicate that the trial contains the gait cycle breakdown times, the characters “P0020” indicate the participant number (in this example the 20th), the characters “TW” indicate the locomotion type and environment (O=overground, T=treadmill, W=walking, R=running), and the numbers “01” indicate the trial number. Please note that the running overground trials of participants P0001, P0007, P0008 and P0009 only contain 21, 29, 29 and 26 cycles, respectively.
The files containing the raw, filtered, and the normalized EMG data are available in RData format, in the files named “RAW_EMG.RData” and “FILT_EMG.RData”. The raw EMG files are structured as data frames with 30000 rows (one for each recorded data point) and 14 columns. The first column contains the incremental time in seconds. The remaining 13 columns contain the raw EMG data, named with muscle abbreviations that follow those reported above. Each trial is saved as an element of a single R list. Trials are named like “RAW_EMG_P0003_OR_01”, where the characters “RAW_EMG” indicate that the trial contains raw emg data, the characters “P0003” indicate the participant number (in this example the 3rd), the characters “OR” indicate the locomotion type and environment (see above), and the numbers “01” indicate the trial number. The filtered and time-normalized emg data is named, following the same rules, like “FILT_EMG_P0003_OR_01”.
The files containing the muscle synergies extracted from the filtered and normalized EMG data are available in RData format, in the file named “SYNS.RData”. Each element of this R list represents one trial and contains the factorization rank (list element named “synsR2”), the motor modules (list element named “M”), the motor primitives (list element named “P”), the reconstructed EMG (list element named “Vr”), the number of iterations needed by the NMF algorithm to converge (list element named “iterations”), and the reconstruction quality measured as the coefficient of determination (list element named “R2”). The motor modules and motor primitives are presented as direct output of the factorization and not in any functional order. Motor modules are data frames with 13 rows (number of recorded muscles) and a number of columns equal to the number of synergies (which might differ from trial to trial). The rows, named with muscle abbreviations that follow those reported above, contain the time-independent coefficients (motor modules M), one for each synergy and for each muscle. Motor primitives are data frames with 6000 rows and a number of columns equal to the number of synergies (which might differ from trial to trial) plus one. The rows contain the time-dependent coefficients (motor primitives P), one column for each synergy plus the time points (columns are named e.g. “time, Syn1, Syn2, Syn3”, where “Syn” is the abbreviation for “synergy”). Each gait cycle contains 200 data points, 100 for the stance and 100 for the swing phase which, multiplied by the 30 recorded cycles, result in 6000 data points distributed in as many rows. This output is transposed as compared to the one discussed in the methods section to improve user readability. Trials are named like “SYNS_ P0012_OW_01”, where the characters “SYNS” indicate that the trial contains muscle synergy data, the characters “P0012” indicate the participant number (in this example the 12th), the characters “OW” indicate the locomotion type and environment (see above), and the numbers “01” indicate the trial number. Given the nature of the NMF algorithm for the extraction of muscle synergies, the supplementary data set might show non-significant differences as compared to the one used for obtaining the results of this paper.
All the code used for the pre-processing of EMG data and the extraction of muscle synergies is available in R format. Explanatory comments are profusely present throughout the script “muscle_synergies.R”.
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This dataset is about book series. It has 2 rows and is filtered where the authors is Larry R. Williams. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
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License information was derived automatically
This dataset is about book subjects. It has 2 rows and is filtered where the books is An R and S-Plus companion to applied regression. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Version 5 release notes:
Removes support for SPSS and Excel data.Changes the crimes that are stored in each file. There are more files now with fewer crimes per file. The files and their included crimes have been updated below.
Adds in agencies that report 0 months of the year.Adds a column that indicates the number of months reported. This is generated summing up the number of unique months an agency reports data for. Note that this indicates the number of months an agency reported arrests for ANY crime. They may not necessarily report every crime every month. Agencies that did not report a crime with have a value of NA for every arrest column for that crime.Removes data on runaways.
Version 4 release notes:
Changes column names from "poss_coke" and "sale_coke" to "poss_heroin_coke" and "sale_heroin_coke" to clearly indicate that these column includes the sale of heroin as well as similar opiates such as morphine, codeine, and opium. Also changes column names for the narcotic columns to indicate that they are only for synthetic narcotics.
Version 3 release notes:
Add data for 2016.Order rows by year (descending) and ORI.Version 2 release notes:
Fix bug where Philadelphia Police Department had incorrect FIPS county code.
The Arrests by Age, Sex, and Race data is an FBI data set that is part of the annual Uniform Crime Reporting (UCR) Program data. This data contains highly granular data on the number of people arrested for a variety of crimes (see below for a full list of included crimes). The data sets here combine data from the years 1980-2015 into a single file. These files are quite large and may take some time to load.
All the data was downloaded from NACJD as ASCII+SPSS Setup files and read into R using the package asciiSetupReader. All work to clean the data and save it in various file formats was also done in R. For the R code used to clean this data, see here. https://github.com/jacobkap/crime_data. If you have any questions, comments, or suggestions please contact me at jkkaplan6@gmail.com.
I did not make any changes to the data other than the following. When an arrest column has a value of "None/not reported", I change that value to zero. This makes the (possible incorrect) assumption that these values represent zero crimes reported. The original data does not have a value when the agency reports zero arrests other than "None/not reported." In other words, this data does not differentiate between real zeros and missing values. Some agencies also incorrectly report the following numbers of arrests which I change to NA: 10000, 20000, 30000, 40000, 50000, 60000, 70000, 80000, 90000, 100000, 99999, 99998.
To reduce file size and make the data more manageable, all of the data is aggregated yearly. All of the data is in agency-year units such that every row indicates an agency in a given year. Columns are crime-arrest category units. For example, If you choose the data set that includes murder, you would have rows for each agency-year and columns with the number of people arrests for murder. The ASR data breaks down arrests by age and gender (e.g. Male aged 15, Male aged 18). They also provide the number of adults or juveniles arrested by race. Because most agencies and years do not report the arrestee's ethnicity (Hispanic or not Hispanic) or juvenile outcomes (e.g. referred to adult court, referred to welfare agency), I do not include these columns.
To make it easier to merge with other data, I merged this data with the Law Enforcement Agency Identifiers Crosswalk (LEAIC) data. The data from the LEAIC add FIPS (state, county, and place) and agency type/subtype. Please note that some of the FIPS codes have leading zeros and if you open it in Excel it will automatically delete those leading zeros.
I created 9 arrest categories myself. The categories are:
Total Male JuvenileTotal Female JuvenileTotal Male AdultTotal Female AdultTotal MaleTotal FemaleTotal JuvenileTotal AdultTotal ArrestsAll of these categories are based on the sums of the sex-age categories (e.g. Male under 10, Female aged 22) rather than using the provided age-race categories (e.g. adult Black, juvenile Asian). As not all agencies report the race data, my method is more accurate. These categories also make up the data in the "simple" version of the data. The "simple" file only includes the above 9 columns as the arrest data (all other columns in the data are just agency identifier columns). Because this "simple" data set need fewer columns, I include all offenses.
As the arrest data is very granular, and each category of arrest is its own column, there are dozens of columns per crime. To keep the data somewhat manageable, there are nine different files, eight which contain different crimes and the "simple" file. Each file contains the data for all years. The eight categories each have crimes belonging to a major crime category and do not overlap in crimes other than with the index offenses. Please note that the crime names provided below are not the same as the column names in the data. Due to Stata limiting column names to 32 characters maximum, I have abbreviated the crime names in the data. The files and their included crimes are:
Index Crimes
MurderRapeRobberyAggravated AssaultBurglaryTheftMotor Vehicle TheftArsonAlcohol CrimesDUIDrunkenness
LiquorDrug CrimesTotal DrugTotal Drug SalesTotal Drug PossessionCannabis PossessionCannabis SalesHeroin or Cocaine PossessionHeroin or Cocaine SalesOther Drug PossessionOther Drug SalesSynthetic Narcotic PossessionSynthetic Narcotic SalesGrey Collar and Property CrimesForgeryFraudStolen PropertyFinancial CrimesEmbezzlementTotal GamblingOther GamblingBookmakingNumbers LotterySex or Family CrimesOffenses Against the Family and Children
Other Sex Offenses
ProstitutionRapeViolent CrimesAggravated AssaultMurderNegligent ManslaughterRobberyWeapon Offenses
Other CrimesCurfewDisorderly ConductOther Non-trafficSuspicion
VandalismVagrancy
Simple
This data set has every crime and only the arrest categories that I created (see above).
If you have any questions, comments, or suggestions please contact me at jkkaplan6@gmail.com.
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Reindeer movement, habitat preference and road permeability model data
Overview: GPS data for wild reindeer were collected within a larger project in Rondane-South and Rondane-North wild reindeer management areas, a mountainous region of central-southern Norway (10 46’ E, 61 38’ N). We used locations collected from five adult female reindeer every three hours between 1 June to 29 September 2012 (N = 973, 960, 871, 971 and 974 locations, respectively). Around 60% of the area is located above tree-line between 1000 and 1500 m, and is dominated by rocks and lichen heath; lower elevations (above 500 m) are characterised by a mix of meadows, grass and willow communities. The area occupied by the reindeer used in this study extends between ca. 400 and 1900 m, and is fragmented by public and private roads (access to the latter is often restricted, so is characterised by lower traffic volumes than the former).
The data we provide can be used in conjunction with the R code in the Supplementary Materials of the published paper to fit the models presented in that paper.
The zip file contains five R data files corresponding to five reindeer. The files are named "data_" followed by one of the ID numbers of the reindeer (11264, 11265, 9397, 7625, 9406). Each R data (*.RData) file contains an R list object called "fitdata" in R, composed of the following data structures:
Definitions: N_s = the number of movement "steps" (sequential telemetry locations) for a reindeer N_a = the number of grid cells in the landscape (all cells falling within 5km of any telemetry point.
(i) fitdata$usehab
A matrix (dimensions: N_s rows, 4 columns) of 'used' habitat types (the habitat value at each telemetry location in the movement path). The four columns are: elevation (km), elevation^2, distance to road (km), distance to road^2. The squared terms are included because the habitat preference model uses quadratic terms to allow for non-linear preference with respect to the two habitat covariates.
(ii) fitdata$availhab
A matrix (dimensions: N_a rows, 4 columns) of 'available' habitat types (the habitat value at each raster grid cell in the spatial domain of the analysis). The four columns are: elevation (km), elevation^2, distance to road (km), distance to road^2.
(iii) fitdata$use.xy
A matrix (dimensions N_s + 1 rows, 2 columns) of the x and y coordinates (km) of the reindeer telemetry locations. This matrix is used to precalculate a large distance matrix ("dm") representing the distances among all use and available points (dimensions: N_s rows, N_a columns). Although this 'dm' matrix is very large, pre-calculating the distance matrix greatly improves the speed of model fitting by eliminating the need to repeatedly re-calculate distances.
(iv) fitdata$stepdst
A vector of length N_s - 1 representing the Euclidean distance (km) between consecutive telemetry locations.
(v) fitdata$avail.xy
A matrix (dimensions N_a rows, 2 columns) of the x and y coordinates (km) of the grid cells forming the 'availability' sample.
(vi) fitdata$use.rdzn
A vector of length N_s containing arbitrary ID numbers corresponding to regions of space that are bounded by a network of roads. This could be conceptualised in GIS terms as forming polygons based on the lines contained in the road network, and assigning an arbitrary unique ID to each of those polygons. Road crossings are indicated by a change in the ID number in this time series. The reason for using this approach to identifying road crossings is computational efficiency, and to avoid the assumption that the straight-line connected two consecutive telemetry locations can be used to calculate road crossings. For example, if this straight line 'clips' a bend in a road then that would indicate 2 crossings, while the animal may in fact have remained in the same region without ever crossing a road.
(vii) fitdata$avail.rdzn
A vector of length N_a containing arbitrary ID numbers corresponding to regions of space that are bounded by a network of roads (see vi) for each grid cell in the availability sample.
Telemetry and habitat data for 5 reindeer over 1 summer; R data objects.
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This dataset is about book subjects. It has 28 rows and is filtered where the authors is Michael R. Phillips. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
This dataset is about book subjects. It has 2 rows and is filtered where the authors is Diego R. Martin. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
This dataset is about book subjects. It has 3 rows and is filtered where the authors is Michelle R. Darnell. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
This dataset is about book series. It has 2 rows and is filtered where the authors is Karen R. Seeker. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
This dataset is about book series. It has 3 rows and is filtered where the authors is Betty R. Sweet. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
This dataset is about book subjects. It has 8 rows and is filtered where the authors is Sharon R. Krause. It features 10 columns including number of authors, number of books, earliest publication date, and latest publication date.
The segment counts by social group and species or species group for the Waterfowl Breeding Population and Habitat Survey and associated segment effort information. Three data files are included with their associated metadata (html and xml formats). Segment counts are summed counts of waterfowl per segment and are separated into two files, described below, along with the effort table needed to analyze recent segment count information. wbphs_segment_counts_1955to1999_forDistribution.csv, which represents the period prior the collection of geolocated data. There is no associated effort file for these counts and segments with zero birds are included in the segment counts table, so effort can be inferred; there is no information to determine the proportion of each segment surveyed for this period and it must be presumed they were surveyed completely. Number of rows in table = 1,988,290. wbphs_segment_counts_forDistribution.csv, which contains positive segment records only, by species or species group beginning with 2000. wbphs_segment_effort_forDistribution.csv file is important for this segment counts file and can be used to infer zero value segments, by species or species group. Number of rows in table = 365,863. wbphs_segment_effort_forDistribution.csv. The segment survey effort and location from the Waterfowl Breeding Population and Habitat Survey beginning with 2000. If a segment was not flown, it is absent from the table for the corresponding year. Number of rows in table = 65,122. Also included here is a small R code file, createSingleSegmentCountTable.R, which can be run to format the 2000+ data to match the 1955-1999 format and combine the data over the two time periods. Please consult the metadata for an explanation of the fields and other information to understand the limitations of the data.