Database containing all antibody structures available in the PDB, annotated and presented in consistent fashion.Each structure is annotated with number of properties including experimental details, antibody nomenclature (e.g. heavy-light pairings), curated affinity data and sequence annotations. You can use the database to inspect individual structures, create and download datasets for analysis, search the database for structures with similar sequences to your query, monitor the known structural repetoire of antibodies.

Tracks all antibody and nanobody related therapeutics recognized by World Health Organisation, and identifies any corresponding structures in Structural Antibody Database with near exact or exact variable domain sequence matches. Synchronized with SAbDab to update weekly, reflecting new Protein Data Bank entries and availability of new sequence data published by WHO.

Model weights of the AbMPNN model (arXiv:2310.19513) presented at the 2023 ICML Workshop on Computational Biology, and csv files with the split between train, test and validation across the SAbDab and ImmuneBuilder datasets.

This model is based on ProteinMPNN and can be run using the corresponding code: https://github.com/dauparas/ProteinMPNN.