3 datasets found
  1. f

    Additional file 1 of SRT-Server: powering the analysis of spatial...

    • springernature.figshare.com
    xlsx
    Updated Aug 18, 2024
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    Sheng Yang; Xiang Zhou (2024). Additional file 1 of SRT-Server: powering the analysis of spatial transcriptomic data [Dataset]. http://doi.org/10.6084/m9.figshare.25092534.v1
    Explore at:
    xlsxAvailable download formats
    Unique identifier
    https://doi.org/10.6084/m9.figshare.25092534.v1
    Dataset updated
    Aug 18, 2024
    Dataset provided by
    figshare
    Authors
    Sheng Yang; Xiang Zhou
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Additional file 1: Supplementary Tables. Table S1. Summary for the scRNA-seq data with cell type annotation for different tissue in human and mouse. Table S2. Summary for the maker information for different tissue in human. Table S3. Computational consumption for three case studies. Table S4. Summary for association between genes associated with EMT and pseudo-time.

  2. Spatial Genomics and Transcriptomics Market Outlook 2035

    • rootsanalysis.com
    Updated Apr 18, 2024
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    Roots Analysis (2024). Spatial Genomics and Transcriptomics Market Outlook 2035 [Dataset]. https://www.rootsanalysis.com/reports/spatial-genomics-market.html
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    Dataset updated
    Apr 18, 2024
    Dataset provided by
    Authors
    Roots Analysis
    License

    https://www.rootsanalysis.com/privacy.htmlhttps://www.rootsanalysis.com/privacy.html

    Time period covered
    2021 - 2031
    Area covered
    Global
    Description

    The spatial genomics and transcriptomics market is expected to grow at CAGR of 11.9% during the forecast period

  3. 10X Genomics Human Visium Spatial Transcriptomics Demo Dataset for Cellxgene...

    • zenodo.org
    application/gzip
    Updated Dec 7, 2021
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    Kejie Li; Kejie Li (2021). 10X Genomics Human Visium Spatial Transcriptomics Demo Dataset for Cellxgene VIP [Dataset]. http://doi.org/10.5281/zenodo.5524883
    Explore at:
    application/gzipAvailable download formats
    Unique identifier
    https://doi.org/10.5281/zenodo.5524883
    Dataset updated
    Dec 7, 2021
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Kejie Li; Kejie Li
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    4 Visium Spatial Transcriptomics datasets downloaded 10X Genomics data site ,and organized in the way to be used for Cellxgene VIP input.

    10X_demo_data_Breast_Cancer_Block_A_Section_1
    10X_demo_data_Breast_Cancer_Block_A_Section_2
    10X_demo_data_Human_Heart
    10X_demo_data_Human_Lymph_Node

  4. Not seeing a result you expected?
    Learn how you can add new datasets to our index.

Share
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Click to copy link
Link copied
Close
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Sheng Yang; Xiang Zhou (2024). Additional file 1 of SRT-Server: powering the analysis of spatial transcriptomic data [Dataset]. http://doi.org/10.6084/m9.figshare.25092534.v1

Additional file 1 of SRT-Server: powering the analysis of spatial transcriptomic data

Related Article
Explore at:
xlsxAvailable download formats
Unique identifier
https://doi.org/10.6084/m9.figshare.25092534.v1
Dataset updated
Aug 18, 2024
Dataset provided by
figshare
Authors
Sheng Yang; Xiang Zhou
License

Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically

Description

Additional file 1: Supplementary Tables. Table S1. Summary for the scRNA-seq data with cell type annotation for different tissue in human and mouse. Table S2. Summary for the maker information for different tissue in human. Table S3. Computational consumption for three case studies. Table S4. Summary for association between genes associated with EMT and pseudo-time.

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