2 datasets found
  1. a

    Data from: SedCT: MATLAB tools for standardized and quantitative processing...

    • arcticdata.io
    • search-demo.dataone.org
    • +1more
    Updated Jul 20, 2020
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    Brendan Reilly; Joseph Stoner; Jason Wiest (2020). SedCT: MATLAB tools for standardized and quantitative processing of sediment core computed tomography (CT) data collected using a medical CT scanner [Dataset]. http://doi.org/10.18739/A2K931707
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    Dataset updated
    Jul 20, 2020
    Dataset provided by
    Arctic Data Center
    Authors
    Brendan Reilly; Joseph Stoner; Jason Wiest
    Time period covered
    Jan 1, 2014 - Jan 1, 2019
    Area covered
    Description

    This entry archives the SedCT MATLAB code, version 1.05, which is a MATLAB based application with graphical interface for processing of sediment core Computed Tomography (CT) data collected on a medical CT scanner. It was designed for use with products from the Oregon State University (OSU) College of Veterinary Medicine Toshiba 64 Slice medical CT scanner, but has been tested on other medical CT scanner systems. The program is documented by Reilly et al. (2017) and on the OSU Marine and Geology Repository website (www.osu-mgr.org/sedct). We also include sample CT data from a sediment core collected from Fish Lake, Utah (Reilly et al., 2018). Computed tomography (CT) of sediment cores allows for high-resolution images, three-dimensional volumes, and down core profiles. These quantitative data are generated through the attenuation of X-rays, which are sensitive to sediment density and atomic number, and are stored in pixels as relative gray scale values or Hounsfield units (HU). We present a suite of MATLAB™ tools specifically designed for routine sediment core analysis as a means to standardize and better quantify the products of CT data collected on medical CT scanners. SedCT uses a graphical interface to process Digital Imaging and Communications in Medicine (DICOM) files, stitch overlapping scanned intervals, and create down core HU profiles in a manner robust to normal coring imperfections. Utilizing a random sampling technique, SedCT reduces data size and allows for quick processing on typical laptop computers. SedCTimage uses a graphical interface to create quality tiff files of CT slices that are scaled to a user-defined HU range, preserving the quantitative nature of CT images and easily allowing for comparison between sediment cores with different HU means and variance. References Reilly, B. T., Stoner, J. S., & Wiest, J. (2017). SedCT: MATLAB™ tools for standardized and quantitative processing of sediment core computed tomography (CT) data collected using a medical CT scanner. Geochemistry, Geophysics, Geosystems, 18(8), 3231–3240. https://doi.org/10.1002/2017GC006884 Reilly, B. T., Stoner, J. S., Hatfield, R. G., Abbott, M. B., Marchetti, D. W., Larsen, D. J., et al. (2018). Regionally consistent Western North America paleomagnetic directions from 15 to 35 ka: Assessing chronology and uncertainty with paleosecular variation (PSV) stratigraphy. Quaternary Science Reviews, 201, 186–205. https://doi.org/10.1016/j.quascirev.2018.10.016

  2. Data from: Accelerating Performance Inference over Closed Systems by...

    • data.europa.eu
    unknown
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    Zenodo, Accelerating Performance Inference over Closed Systems by Asymptotic Methods [Dataset]. https://data.europa.eu/data/datasets/oai-zenodo-org-546873?locale=fr
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    unknown(758)Available download formats
    Dataset authored and provided by
    Zenodohttp://zenodo.org/
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This archive includes the research data associated to the paper: Giuliano Casale. Accelerating Performance Inference over Closed Systems by Asymptotic Methods. Proc. ACM Meas. Anal. Comput. Syst., 1(1), 2017. The paper is accepted for presentation at ACM SIGMETRICS 2017. The research data requires MATLAB 2015a or later. Four datasets are included, each corresponding to a section of the paper: - sec5.3.1: Small and medium models without infinite server nodes (Section 5.3.1) - sec5.3.2: Large models without infinite server nodes (Section 5.3.2) - sec5.3.3: Models with infinite server nodes (Section 5.3.3) - sec5.4: Optimization programs (Section 5.4) A description of each dataset is included in the README.TXT file inside each folder.

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Brendan Reilly; Joseph Stoner; Jason Wiest (2020). SedCT: MATLAB tools for standardized and quantitative processing of sediment core computed tomography (CT) data collected using a medical CT scanner [Dataset]. http://doi.org/10.18739/A2K931707

Data from: SedCT: MATLAB tools for standardized and quantitative processing of sediment core computed tomography (CT) data collected using a medical CT scanner

Related Article
Explore at:
19 scholarly articles cite this dataset (View in Google Scholar)
Dataset updated
Jul 20, 2020
Dataset provided by
Arctic Data Center
Authors
Brendan Reilly; Joseph Stoner; Jason Wiest
Time period covered
Jan 1, 2014 - Jan 1, 2019
Area covered
Description

This entry archives the SedCT MATLAB code, version 1.05, which is a MATLAB based application with graphical interface for processing of sediment core Computed Tomography (CT) data collected on a medical CT scanner. It was designed for use with products from the Oregon State University (OSU) College of Veterinary Medicine Toshiba 64 Slice medical CT scanner, but has been tested on other medical CT scanner systems. The program is documented by Reilly et al. (2017) and on the OSU Marine and Geology Repository website (www.osu-mgr.org/sedct). We also include sample CT data from a sediment core collected from Fish Lake, Utah (Reilly et al., 2018). Computed tomography (CT) of sediment cores allows for high-resolution images, three-dimensional volumes, and down core profiles. These quantitative data are generated through the attenuation of X-rays, which are sensitive to sediment density and atomic number, and are stored in pixels as relative gray scale values or Hounsfield units (HU). We present a suite of MATLAB™ tools specifically designed for routine sediment core analysis as a means to standardize and better quantify the products of CT data collected on medical CT scanners. SedCT uses a graphical interface to process Digital Imaging and Communications in Medicine (DICOM) files, stitch overlapping scanned intervals, and create down core HU profiles in a manner robust to normal coring imperfections. Utilizing a random sampling technique, SedCT reduces data size and allows for quick processing on typical laptop computers. SedCTimage uses a graphical interface to create quality tiff files of CT slices that are scaled to a user-defined HU range, preserving the quantitative nature of CT images and easily allowing for comparison between sediment cores with different HU means and variance. References Reilly, B. T., Stoner, J. S., & Wiest, J. (2017). SedCT: MATLAB™ tools for standardized and quantitative processing of sediment core computed tomography (CT) data collected using a medical CT scanner. Geochemistry, Geophysics, Geosystems, 18(8), 3231–3240. https://doi.org/10.1002/2017GC006884 Reilly, B. T., Stoner, J. S., Hatfield, R. G., Abbott, M. B., Marchetti, D. W., Larsen, D. J., et al. (2018). Regionally consistent Western North America paleomagnetic directions from 15 to 35 ka: Assessing chronology and uncertainty with paleosecular variation (PSV) stratigraphy. Quaternary Science Reviews, 201, 186–205. https://doi.org/10.1016/j.quascirev.2018.10.016

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