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Sample data for exercises in Further Adventures in Data Cleaning.
Data Science Platform Market Size 2025-2029
The data science platform market size is forecast to increase by USD 763.9 million at a CAGR of 40.2% between 2024 and 2029.
The market is experiencing significant growth, driven by the integration of artificial intelligence (AI) and machine learning (ML). This enhancement enables more advanced data analysis and prediction capabilities, making data science platforms an essential tool for businesses seeking to gain insights from their data. Another trend shaping the market is the emergence of containerization and microservices in platforms. This development offers increased flexibility and scalability, allowing organizations to efficiently manage their projects.
However, the use of platforms also presents challenges, particularly In the area of data privacy and security. Ensuring the protection of sensitive data is crucial for businesses, and platforms must provide strong security measures to mitigate risks. In summary, the market is witnessing substantial growth due to the integration of AI and ML technologies, containerization, and microservices, while data privacy and security remain key challenges.
What will be the Size of the Data Science Platform Market During the Forecast Period?
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The market is experiencing significant growth due to the increasing demand for advanced data analysis capabilities in various industries. Cloud-based solutions are gaining popularity as they offer scalability, flexibility, and cost savings. The market encompasses the entire project life cycle, from data acquisition and preparation to model development, training, and distribution. Big data, IoT, multimedia, machine data, consumer data, and business data are prime sources fueling this market's expansion. Unstructured data, previously challenging to process, is now being effectively managed through tools and software. Relational databases and machine learning models are integral components of platforms, enabling data exploration, preprocessing, and visualization.
Moreover, Artificial intelligence (AI) and machine learning (ML) technologies are essential for handling complex workflows, including data cleaning, model development, and model distribution. Data scientists benefit from these platforms by streamlining their tasks, improving productivity, and ensuring accurate and efficient model training. The market is expected to continue its growth trajectory as businesses increasingly recognize the value of data-driven insights.
How is this Data Science Platform Industry segmented and which is the largest segment?
The industry research report provides comprehensive data (region-wise segment analysis), with forecasts and estimates in 'USD million' for the period 2025-2029, as well as historical data from 2019-2023 for the following segments.
Deployment
On-premises
Cloud
Component
Platform
Services
End-user
BFSI
Retail and e-commerce
Manufacturing
Media and entertainment
Others
Sector
Large enterprises
SMEs
Geography
North America
Canada
US
Europe
Germany
UK
France
APAC
China
India
Japan
South America
Brazil
Middle East and Africa
By Deployment Insights
The on-premises segment is estimated to witness significant growth during the forecast period.
On-premises deployment is a traditional method for implementing technology solutions within an organization. This approach involves purchasing software with a one-time license fee and a service contract. On-premises solutions offer enhanced security, as they keep user credentials and data within the company's premises. They can be customized to meet specific business requirements, allowing for quick adaptation. On-premises deployment eliminates the need for third-party providers to manage and secure data, ensuring data privacy and confidentiality. Additionally, it enables rapid and easy data access, and keeps IP addresses and data confidential. This deployment model is particularly beneficial for businesses dealing with sensitive data, such as those in manufacturing and large enterprises. While cloud-based solutions offer flexibility and cost savings, on-premises deployment remains a popular choice for organizations prioritizing data security and control.
Get a glance at the Data Science Platform Industry report of share of various segments. Request Free Sample
The on-premises segment was valued at USD 38.70 million in 2019 and showed a gradual increase during the forecast period.
Regional Analysis
North America is estimated to contribute 48% to the growth of the global market during the forecast period.
Technavio's analysts have elaborately explained the regional trends and drivers that shape the market during the forecast period.
For more insights on the market share of various regions, Request F
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The folder named “submission” contains the following:
ijgis.yml
: This file lists all the Python libraries and dependencies required to run the code.ijgis.yml
file to create a Python project and environment. Ensure you activate the environment before running the code.pythonProject
folder contains several .py
files and subfolders, each with specific functionality as described below..png
file for each column of the raw gaze and IMU recordings, color-coded with logged events..csv
files.overlapping_sliding_window_loop.py
.plot_labels_comparison(df, save_path, x_label_freq=10, figsize=(15, 5))
in line 116 visualizes the data preparation results. As this visualization is not used in the paper, the line is commented out, but if you want to see visually what has been changed compared to the original data, you can comment out this line..csv
files in the results folder.This part contains three main code blocks:
iii. One for the XGboost code with correct hyperparameter tuning:
Please read the instructions for each block carefully to ensure that the code works smoothly. Regardless of which block you use, you will get the classification results (in the form of scores) for unseen data. The way we empirically test the confidence threshold of
Note: Please read the instructions for each block carefully to ensure that the code works smoothly. Regardless of which block you use, you will get the classification results (in the form of scores) for unseen data. The way we empirically calculated the confidence threshold of the model (explained in the paper in Section 5.2. Part II: Decoding surveillance by sequence analysis) is given in this block in lines 361 to 380.
.csv
file containing inferred labels.The data is licensed under CC-BY, the code is licensed under MIT.
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The data cleansing software market is expanding rapidly, with a market size of XXX million in 2023 and a projected CAGR of XX% from 2023 to 2033. This growth is driven by the increasing need for accurate and reliable data in various industries, including healthcare, finance, and retail. Key market trends include the growing adoption of cloud-based solutions, the increasing use of artificial intelligence (AI) and machine learning (ML) to automate the data cleansing process, and the increasing demand for data governance and compliance. The market is segmented by deployment type (cloud-based vs. on-premise) and application (large enterprises vs. SMEs vs. government agencies). Major players in the market include IBM, SAS Institute Inc, SAP SE, Trifacta, OpenRefine, Data Ladder, Analytics Canvas (nModal Solutions Inc.), Mo-Data, Prospecta, WinPure Ltd, Symphonic Source Inc, MuleSoft, MapR Technologies, V12 Data, and Informatica. This report provides a comprehensive overview of the global data cleansing software market, with a focus on market concentration, product insights, regional insights, trends, driving forces, challenges and restraints, growth catalysts, leading players, and significant developments.
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The LSC (Leicester Scientific Corpus)
April 2020 by Neslihan Suzen, PhD student at the University of Leicester (ns433@leicester.ac.uk) Supervised by Prof Alexander Gorban and Dr Evgeny MirkesThe data are extracted from the Web of Science [1]. You may not copy or distribute these data in whole or in part without the written consent of Clarivate Analytics.[Version 2] A further cleaning is applied in Data Processing for LSC Abstracts in Version 1*. Details of cleaning procedure are explained in Step 6.* Suzen, Neslihan (2019): LSC (Leicester Scientific Corpus). figshare. Dataset. https://doi.org/10.25392/leicester.data.9449639.v1.Getting StartedThis text provides the information on the LSC (Leicester Scientific Corpus) and pre-processing steps on abstracts, and describes the structure of files to organise the corpus. This corpus is created to be used in future work on the quantification of the meaning of research texts and make it available for use in Natural Language Processing projects.LSC is a collection of abstracts of articles and proceeding papers published in 2014, and indexed by the Web of Science (WoS) database [1]. The corpus contains only documents in English. Each document in the corpus contains the following parts:1. Authors: The list of authors of the paper2. Title: The title of the paper 3. Abstract: The abstract of the paper 4. Categories: One or more category from the list of categories [2]. Full list of categories is presented in file ‘List_of _Categories.txt’. 5. Research Areas: One or more research area from the list of research areas [3]. Full list of research areas is presented in file ‘List_of_Research_Areas.txt’. 6. Total Times cited: The number of times the paper was cited by other items from all databases within Web of Science platform [4] 7. Times cited in Core Collection: The total number of times the paper was cited by other papers within the WoS Core Collection [4]The corpus was collected in July 2018 online and contains the number of citations from publication date to July 2018. We describe a document as the collection of information (about a paper) listed above. The total number of documents in LSC is 1,673,350.Data ProcessingStep 1: Downloading of the Data Online
The dataset is collected manually by exporting documents as Tab-delimitated files online. All documents are available online.Step 2: Importing the Dataset to R
The LSC was collected as TXT files. All documents are extracted to R.Step 3: Cleaning the Data from Documents with Empty Abstract or without CategoryAs our research is based on the analysis of abstracts and categories, all documents with empty abstracts and documents without categories are removed.Step 4: Identification and Correction of Concatenate Words in AbstractsEspecially medicine-related publications use ‘structured abstracts’. Such type of abstracts are divided into sections with distinct headings such as introduction, aim, objective, method, result, conclusion etc. Used tool for extracting abstracts leads concatenate words of section headings with the first word of the section. For instance, we observe words such as ConclusionHigher and ConclusionsRT etc. The detection and identification of such words is done by sampling of medicine-related publications with human intervention. Detected concatenate words are split into two words. For instance, the word ‘ConclusionHigher’ is split into ‘Conclusion’ and ‘Higher’.The section headings in such abstracts are listed below:
Background Method(s) Design Theoretical Measurement(s) Location Aim(s) Methodology Process Abstract Population Approach Objective(s) Purpose(s) Subject(s) Introduction Implication(s) Patient(s) Procedure(s) Hypothesis Measure(s) Setting(s) Limitation(s) Discussion Conclusion(s) Result(s) Finding(s) Material (s) Rationale(s) Implications for health and nursing policyStep 5: Extracting (Sub-setting) the Data Based on Lengths of AbstractsAfter correction, the lengths of abstracts are calculated. ‘Length’ indicates the total number of words in the text, calculated by the same rule as for Microsoft Word ‘word count’ [5].According to APA style manual [6], an abstract should contain between 150 to 250 words. In LSC, we decided to limit length of abstracts from 30 to 500 words in order to study documents with abstracts of typical length ranges and to avoid the effect of the length to the analysis.
Step 6: [Version 2] Cleaning Copyright Notices, Permission polices, Journal Names and Conference Names from LSC Abstracts in Version 1Publications can include a footer of copyright notice, permission policy, journal name, licence, author’s right or conference name below the text of abstract by conferences and journals. Used tool for extracting and processing abstracts in WoS database leads to attached such footers to the text. For example, our casual observation yields that copyright notices such as ‘Published by Elsevier ltd.’ is placed in many texts. To avoid abnormal appearances of words in further analysis of words such as bias in frequency calculation, we performed a cleaning procedure on such sentences and phrases in abstracts of LSC version 1. We removed copyright notices, names of conferences, names of journals, authors’ rights, licenses and permission policies identified by sampling of abstracts.Step 7: [Version 2] Re-extracting (Sub-setting) the Data Based on Lengths of AbstractsThe cleaning procedure described in previous step leaded to some abstracts having less than our minimum length criteria (30 words). 474 texts were removed.Step 8: Saving the Dataset into CSV FormatDocuments are saved into 34 CSV files. In CSV files, the information is organised with one record on each line and parts of abstract, title, list of authors, list of categories, list of research areas, and times cited is recorded in fields.To access the LSC for research purposes, please email to ns433@le.ac.uk.References[1]Web of Science. (15 July). Available: https://apps.webofknowledge.com/ [2]WoS Subject Categories. Available: https://images.webofknowledge.com/WOKRS56B5/help/WOS/hp_subject_category_terms_tasca.html [3]Research Areas in WoS. Available: https://images.webofknowledge.com/images/help/WOS/hp_research_areas_easca.html [4]Times Cited in WoS Core Collection. (15 July). Available: https://support.clarivate.com/ScientificandAcademicResearch/s/article/Web-of-Science-Times-Cited-accessibility-and-variation?language=en_US [5]Word Count. Available: https://support.office.com/en-us/article/show-word-count-3c9e6a11-a04d-43b4-977c-563a0e0d5da3 [6]A. P. Association, Publication manual. American Psychological Association Washington, DC, 1983.
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This dataset includes all of the data downloaded from GBIF (DOIs provided in README.md as well as below, downloaded Feb 2021) as well as data downloaded from SCAN. This dataset has 2,808,432 records and can be used as a reference to the verbatim data before it underwent the cleaning process. The only modifications made to this datset after direct download from the data portals are the following:
1) for GBIF records, I renamed the countryCode column to be "country" so that the column title is consistent across both GBIF and SCAN 2) A source column was added where I specify if the record came from GBIF or SCAN 3) Duplicate records across SCAN and GBIF were removed by identifying identical instances "catalogNumber" and "institutionCode" 4) Only the Darwin core columns (DwC) that were shared across downloaded datasets were retained. GBIF contained ~249 DwC variables, and SCAN data contained fewer, so this combined dataset only includes the ~80 columns shared between the two datasets
For GBIF, we downloaded the data in three separate chunks, therefore there are three DOIs. See below:
GBIF.org (3 February 2021) GBIF Occurrence Downloadhttps://doi.org/10.15468/dl.6cxfsw GBIF.org (3 February 2021) GBIF Occurrence Downloadhttps://doi.org/10.15468/dl.b9rfa7 GBIF.org (3 February 2021) GBIF Occurrence Downloadhttps://doi.org/10.15468/dl.w2nndm
Overview
This repository contains ready-to-use frequency time series as well as the corresponding pre-processing scripts in python. The data covers three synchronous areas of the European power grid:
This work is part of the paper "Predictability of Power Grid Frequency"[1]. Please cite this paper, when using the data and the code. For a detailed documentation of the pre-processing procedure we refer to the supplementary material of the paper.
Data sources
We downloaded the frequency recordings from publically available repositories of three different Transmission System Operators (TSOs).
Content of the repository
A) Scripts
The python scripts run with Python 3.7 and with the packages found in "requirements.txt".
B) Yearly converted and cleansed data
The folders "
Use cases
We point out that this repository can be used in two different was:
Use pre-processed data: You can directly use the converted or the cleansed data. Note however, that both data sets include segments of NaN-values due to missing and corrupted recordings. Only a very small part of the NaN-values were eliminated in the cleansed data to not manipulate the data too much.
Produce your own cleansed data: Depending on your application, you might want to cleanse the data in a custom way. You can easily add your custom cleansing procedure in "clean_corrupted_data.py" and then produce cleansed data from the raw data in "
License
This work is licensed under multiple licenses, which are located in the "LICENSES" folder.
Changelog
Version 2:
Version 3:
This clean dataset is a refined version of our company datasets, consisting of 35M+ data records.
It’s an excellent data solution for companies with limited data engineering capabilities and those who want to reduce their time to value. You get filtered, cleaned, unified, and standardized B2B data. After cleaning, this data is also enriched by leveraging a carefully instructed large language model (LLM).
AI-powered data enrichment offers more accurate information in key data fields, such as company descriptions. It also produces over 20 additional data points that are very valuable to B2B businesses. Enhancing and highlighting the most important information in web data contributes to quicker time to value, making data processing much faster and easier.
For your convenience, you can choose from multiple data formats (Parquet, JSON, JSONL, or CSV) and select suitable delivery frequency (quarterly, monthly, or weekly).
Coresignal is a leading public business data provider in the web data sphere with an extensive focus on firmographic data and public employee profiles. More than 3B data records in different categories enable companies to build data-driven products and generate actionable insights. Coresignal is exceptional in terms of data freshness, with 890M+ records updated monthly for unprecedented accuracy and relevance.
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The market for data center cleaning services is expected to grow from USD XXX million in 2025 to USD XXX million by 2033, at a CAGR of XX% during the forecast period 2025-2033. The growth of the market is attributed to the increasing number of data centers and the need to maintain these facilities in a clean environment. Data centers are critical to the functioning of the modern economy, as they house the servers that store and process vast amounts of data. Maintaining these facilities in a clean environment is essential to prevent the accumulation of dust and other contaminants, which can lead to equipment failures and downtime. The market for data center cleaning services is segmented by type, application, and region. By type, the market is segmented into equipment cleaning, ceiling cleaning, floor cleaning, and others. Equipment cleaning is the largest segment of the market, accounting for over XX% of the total market revenue in 2025. By application, the market is segmented into the internet industry, finance and insurance, manufacturing industry, government departments, and others. The internet industry is the largest segment of the market, accounting for over XX% of the total market revenue in 2025. By region, the market is segmented into North America, South America, Europe, the Middle East & Africa, and Asia Pacific. North America is the largest segment of the market, accounting for over XX% of the total market revenue in 2025.
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Additional file 1. Data and estimation in the simulation study.
National, regional
Households
Sample survey data [ssd]
The 2020 Vietnam COVID-19 High Frequency Phone Survey of Households (VHFPS) uses a nationally representative household survey from 2018 as the sampling frame. The 2018 baseline survey includes 46,980 households from 3132 communes (about 25% of total communes in Vietnam). In each commune, one EA is randomly selected and then 15 households are randomly selected in each EA for interview. We use the large module of to select the households for official interview of the VHFPS survey and the small module households as reserve for replacement. After data processing, the final sample size for Round 2 is 3,935 households.
Computer Assisted Telephone Interview [cati]
The questionnaire for Round 2 consisted of the following sections
Section 2. Behavior Section 3. Health Section 5. Employment (main respondent) Section 6. Coping Section 7. Safety Nets Section 8. FIES
Data cleaning began during the data collection process. Inputs for the cleaning process include available interviewers’ note following each question item, interviewers’ note at the end of the tablet form as well as supervisors’ note during monitoring. The data cleaning process was conducted in following steps:
• Append households interviewed in ethnic minority languages with the main dataset interviewed in Vietnamese.
• Remove unnecessary variables which were automatically calculated by SurveyCTO
• Remove household duplicates in the dataset where the same form is submitted more than once.
• Remove observations of households which were not supposed to be interviewed following the identified replacement procedure.
• Format variables as their object type (string, integer, decimal, etc.)
• Read through interviewers’ note and make adjustment accordingly. During interviews, whenever interviewers find it difficult to choose a correct code, they are recommended to choose the most appropriate one and write down respondents’ answer in detail so that the survey management team will justify and make a decision which code is best suitable for such answer.
• Correct data based on supervisors’ note where enumerators entered wrong code.
• Recode answer option “Other, please specify”. This option is usually followed by a blank line allowing enumerators to type or write texts to specify the answer. The data cleaning team checked thoroughly this type of answers to decide whether each answer needed recoding into one of the available categories or just keep the answer originally recorded. In some cases, that answer could be assigned a completely new code if it appeared many times in the survey dataset.
• Examine data accuracy of outlier values, defined as values that lie outside both 5th and 95th percentiles, by listening to interview recordings.
• Final check on matching main dataset with different sections, where information is asked on individual level, are kept in separate data files and in long form.
• Label variables using the full question text.
• Label variable values where necessary.
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The datasets presented here were partially used in “Formulation and MIP-heuristics for the lot sizing and scheduling problem with temporal cleanings” (Toscano, A., Ferreira, D. , Morabito, R. , Computers & Chemical Engineering) [1], in “A decomposition heuristic to solve the two-stage lot sizing and scheduling problem with temporal cleaning” (Toscano, A., Ferreira, D. , Morabito, R. , Flexible Services and Manufacturing Journal) [2], and in “A heuristic approach to optimize the production scheduling of fruit-based beverages” (Toscano et al., Gestão & Produção, 2020) [3]. In fruit-based production processes, there are two production stages: preparation tanks and production lines. This production process has some process-specific characteristics, such as temporal cleanings and synchrony between the two production stages, which make optimized production planning and scheduling even more difficult. In this sense, some papers in the literature have proposed different methods to solve this problem. To the best of our knowledge, there are no standard datasets used by researchers in the literature in order to verify the accuracy and performance of proposed methods or to be a benchmark for other researchers considering this problem. The authors have been using small data sets that do not satisfactorily represent different scenarios of production. Since the demand in the beverage sector is seasonal, a wide range of scenarios enables us to evaluate the effectiveness of the proposed methods in the scientific literature in solving real scenarios of the problem. The datasets presented here include data based on real data collected from five beverage companies. We presented four datasets that are specifically constructed assuming a scenario of restricted capacity and balanced costs. These dataset is supplementary data for the submitted paper to Data in Brief [4]. [1] Toscano, A., Ferreira, D., Morabito, R., Formulation and MIP-heuristics for the lot sizing and scheduling problem with temporal cleanings, Computers & Chemical Engineering. 142 (2020) 107038. Doi: 10.1016/j.compchemeng.2020.107038. [2] Toscano, A., Ferreira, D., Morabito, R., A decomposition heuristic to solve the two-stage lot sizing and scheduling problem with temporal cleaning, Flexible Services and Manufacturing Journal. 31 (2019) 142-173. Doi: 10.1007/s10696-017-9303-9. [3] Toscano, A., Ferreira, D., Morabito, R., Trassi, M. V. C., A heuristic approach to optimize the production scheduling of fruit-based beverages. Gestão & Produção, 27(4), e4869, 2020. https://doi.org/10.1590/0104-530X4869-20. [4] Piñeros, J., Toscano, A., Ferreira, D., Morabito, R., Datasets for lot sizing and scheduling problems in the fruit-based beverage production process. Data in Brief (2021).
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As high-throughput methods become more common, training undergraduates to analyze data must include having them generate informative summaries of large datasets. This flexible case study provides an opportunity for undergraduate students to become familiar with the capabilities of R programming in the context of high-throughput evolutionary data collected using macroarrays. The story line introduces a recent graduate hired at a biotech firm and tasked with analysis and visualization of changes in gene expression from 20,000 generations of the Lenski Lab’s Long-Term Evolution Experiment (LTEE). Our main character is not familiar with R and is guided by a coworker to learn about this platform. Initially this involves a step-by-step analysis of the small Iris dataset built into R which includes sepal and petal length of three species of irises. Practice calculating summary statistics and correlations, and making histograms and scatter plots, prepares the protagonist to perform similar analyses with the LTEE dataset. In the LTEE module, students analyze gene expression data from the long-term evolutionary experiments, developing their skills in manipulating and interpreting large scientific datasets through visualizations and statistical analysis. Prerequisite knowledge is basic statistics, the Central Dogma, and basic evolutionary principles. The Iris module provides hands-on experience using R programming to explore and visualize a simple dataset; it can be used independently as an introduction to R for biological data or skipped if students already have some experience with R. Both modules emphasize understanding the utility of R, rather than creation of original code. Pilot testing showed the case study was well-received by students and faculty, who described it as a clear introduction to R and appreciated the value of R for visualizing and analyzing large datasets.
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The Data Preparation Tools market is experiencing robust growth, projected to reach a market size of $3 billion in 2025 and exhibiting a Compound Annual Growth Rate (CAGR) of 17.7% from 2025 to 2033. This significant expansion is driven by several key factors. The increasing volume and velocity of data generated across industries necessitates efficient and effective data preparation processes to ensure data quality and usability for analytics and machine learning initiatives. The rising adoption of cloud-based solutions, coupled with the growing demand for self-service data preparation tools, is further fueling market growth. Businesses across various sectors, including IT and Telecom, Retail and E-commerce, BFSI (Banking, Financial Services, and Insurance), and Manufacturing, are actively seeking solutions to streamline their data pipelines and improve data governance. The diverse range of applications, from simple data cleansing to complex data transformation tasks, underscores the versatility and broad appeal of these tools. Leading vendors like Microsoft, Tableau, and Alteryx are continuously innovating and expanding their product offerings to meet the evolving needs of the market, fostering competition and driving further advancements in data preparation technology. This rapid growth is expected to continue, driven by ongoing digital transformation initiatives and the increasing reliance on data-driven decision-making. The segmentation of the market into self-service and data integration tools, alongside the varied applications across different industries, indicates a multifaceted and dynamic landscape. While challenges such as data security concerns and the need for skilled professionals exist, the overall market outlook remains positive, projecting substantial expansion throughout the forecast period. The adoption of advanced technologies like artificial intelligence (AI) and machine learning (ML) within data preparation tools promises to further automate and enhance the process, contributing to increased efficiency and reduced costs for businesses. The competitive landscape is dynamic, with established players alongside emerging innovators vying for market share, leading to continuous improvement and innovation within the industry.
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ObjectiveTo perform a systematic review examining the variation in methods, results, reporting and risk of bias in electronic health record (EHR)-based studies evaluating management of a common musculoskeletal disease, gout.MethodsTwo reviewers systematically searched MEDLINE, Scopus, Web of Science, CINAHL, PubMed, EMBASE and Google Scholar for all EHR-based studies published by February 2019 investigating gout pharmacological treatment. Information was extracted on study design, eligibility criteria, definitions, medication usage, effectiveness and safety data, comprehensiveness of reporting (RECORD), and Cochrane risk of bias (registered PROSPERO CRD42017065195).ResultsWe screened 5,603 titles/abstracts, 613 full-texts and selected 75 studies including 1.9M gout patients. Gout diagnosis was defined in 26 ways across the studies, most commonly using a single diagnostic code (n = 31, 41.3%). 48.4% did not specify a disease-free period before ‘incident’ diagnosis. Medication use was suboptimal and varied with disease definition while results regarding effectiveness and safety were broadly similar across studies despite variability in inclusion criteria. Comprehensiveness of reporting was variable, ranging from 73% (55/75) appropriately discussing the limitations of EHR data use, to 5% (4/75) reporting on key data cleaning steps. Risk of bias was generally low.ConclusionThe wide variation in case definitions and medication-related analysis among EHR-based studies has implications for reported medication use. This is amplified by variable reporting comprehensiveness and the limited consideration of EHR-relevant biases (e.g. data adequacy) in study assessment tools. We recommend accounting for these biases and performing a sensitivity analysis on case definitions, and suggest changes to assessment tools to foster this.
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The LScDC (Leicester Scientific Dictionary-Core Dictionary)April 2020 by Neslihan Suzen, PhD student at the University of Leicester (ns433@leicester.ac.uk/suzenneslihan@hotmail.com)Supervised by Prof Alexander Gorban and Dr Evgeny Mirkes[Version 3] The third version of LScDC (Leicester Scientific Dictionary-Core) is formed using the updated LScD (Leicester Scientific Dictionary) - Version 3*. All steps applied to build the new version of core dictionary are the same as in Version 2** and can be found in description of Version 2 below. We did not repeat the explanation. The files provided with this description are also same as described as for LScDC Version 2. The numbers of words in the 3rd versions of LScD and LScDC are summarized below. # of wordsLScD (v3) 972,060LScDC (v3) 103,998 * Suzen, Neslihan (2019): LScD (Leicester Scientific Dictionary). figshare. Dataset. https://doi.org/10.25392/leicester.data.9746900.v3 ** Suzen, Neslihan (2019): LScDC (Leicester Scientific Dictionary-Core). figshare. Dataset. https://doi.org/10.25392/leicester.data.9896579.v2[Version 2] Getting StartedThis file describes a sorted and cleaned list of words from LScD (Leicester Scientific Dictionary), explains steps for sub-setting the LScD and basic statistics of words in the LSC (Leicester Scientific Corpus), to be found in [1, 2]. The LScDC (Leicester Scientific Dictionary-Core) is a list of words ordered by the number of documents containing the words, and is available in the CSV file published. There are 104,223 unique words (lemmas) in the LScDC. This dictionary is created to be used in future work on the quantification of the sense of research texts. The objective of sub-setting the LScD is to discard words which appear too rarely in the corpus. In text mining algorithms, usage of enormous number of text data brings the challenge to the performance and the accuracy of data mining applications. The performance and the accuracy of models are heavily depend on the type of words (such as stop words and content words) and the number of words in the corpus. Rare occurrence of words in a collection is not useful in discriminating texts in large corpora as rare words are likely to be non-informative signals (or noise) and redundant in the collection of texts. The selection of relevant words also holds out the possibility of more effective and faster operation of text mining algorithms.To build the LScDC, we decided the following process on LScD: removing words that appear in no more than 10 documents (
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This is the dataset presented in the following manuscript: The Surface Water Chemistry (SWatCh) database: A standardized global database of water chemistry to facilitate large-sample hydrological research, which is currently under review at Earth System Science Data.
Openly accessible global scale surface water chemistry datasets are urgently needed to detect widespread trends and problems, to help identify their possible solutions, and determine critical spatial data gaps where more monitoring is required. Existing datasets are limited in availability, sample size/sampling frequency, and geographic scope. These limitations inhibit the answering of emerging transboundary water chemistry questions, for example, the detection and understanding of delayed recovery from freshwater acidification. Here, we begin to address these limitations by compiling the global surface water chemistry (SWatCh) database. We collect, clean, standardize, and aggregate open access data provided by six national and international agencies to compile a database containing information on sites, methods, and samples, and a GIS shapefile of site locations. We remove poor quality data (for example, values flagged as “suspect” or “rejected”), standardize variable naming conventions and units, and perform other data cleaning steps required for statistical analysis. The database contains water chemistry data for streams, rivers, canals, ponds, lakes, and reservoirs across seven continents, 24 variables, 33,722 sites, and over 5 million samples collected between 1960 and 2022. Similar to prior research, we identify critical spatial data gaps on the African and Asian continents, highlighting the need for more data collection and sharing initiatives in these areas, especially considering freshwater ecosystems in these environs are predicted to be among the most heavily impacted by climate change. We identify the main challenges associated with compiling global databases – limited data availability, dissimilar sample collection and analysis methodology, and reporting ambiguity – and provide recommended solutions. By addressing these challenges and consolidating data from various sources into one standardized, openly available, high quality, and trans-boundary database, SWatCh allows users to conduct powerful and robust statistical analyses of global surface water chemistry.
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Note: Reporting of new COVID-19 Case Surveillance data will be discontinued July 1, 2024, to align with the process of removing SARS-CoV-2 infections (COVID-19 cases) from the list of nationally notifiable diseases. Although these data will continue to be publicly available, the dataset will no longer be updated.
Authorizations to collect certain public health data expired at the end of the U.S. public health emergency declaration on May 11, 2023. The following jurisdictions discontinued COVID-19 case notifications to CDC: Iowa (11/8/21), Kansas (5/12/23), Kentucky (1/1/24), Louisiana (10/31/23), New Hampshire (5/23/23), and Oklahoma (5/2/23). Please note that these jurisdictions will not routinely send new case data after the dates indicated. As of 7/13/23, case notifications from Oregon will only include pediatric cases resulting in death.
This case surveillance public use dataset has 12 elements for all COVID-19 cases shared with CDC and includes demographics, any exposure history, disease severity indicators and outcomes, presence of any underlying medical conditions and risk behaviors, and no geographic data.
The COVID-19 case surveillance database includes individual-level data reported to U.S. states and autonomous reporting entities, including New York City and the District of Columbia (D.C.), as well as U.S. territories and affiliates. On April 5, 2020, COVID-19 was added to the Nationally Notifiable Condition List and classified as “immediately notifiable, urgent (within 24 hours)” by a Council of State and Territorial Epidemiologists (CSTE) Interim Position Statement (Interim-20-ID-01). CSTE updated the position statement on August 5, 2020, to clarify the interpretation of antigen detection tests and serologic test results within the case classification (Interim-20-ID-02). The statement also recommended that all states and territories enact laws to make COVID-19 reportable in their jurisdiction, and that jurisdictions conducting surveillance should submit case notifications to CDC. COVID-19 case surveillance data are collected by jurisdictions and reported voluntarily to CDC.
For more information:
NNDSS Supports the COVID-19 Response | CDC.
The deidentified data in the “COVID-19 Case Surveillance Public Use Data” include demographic characteristics, any exposure history, disease severity indicators and outcomes, clinical data, laboratory diagnostic test results, and presence of any underlying medical conditions and risk behaviors. All data elements can be found on the COVID-19 case report form located at www.cdc.gov/coronavirus/2019-ncov/downloads/pui-form.pdf.
COVID-19 case reports have been routinely submitted using nationally standardized case reporting forms. On April 5, 2020, CSTE released an Interim Position Statement with national surveillance case definitions for COVID-19 included. Current versions of these case definitions are available here: https://ndc.services.cdc.gov/case-definitions/coronavirus-disease-2019-2021/.
All cases reported on or after were requested to be shared by public health departments to CDC using the standardized case definitions for laboratory-confirmed or probable cases. On May 5, 2020, the standardized case reporting form was revised. Case reporting using this new form is ongoing among U.S. states and territories.
To learn more about the limitations in using case surveillance data, visit FAQ: COVID-19 Data and Surveillance.
CDC’s Case Surveillance Section routinely performs data quality assurance procedures (i.e., ongoing corrections and logic checks to address data errors). To date, the following data cleaning steps have been implemented:
To prevent release of data that could be used to identify people, data cells are suppressed for low frequency (<5) records and indirect identifiers (e.g., date of first positive specimen). Suppression includes rare combinations of demographic characteristics (sex, age group, race/ethnicity). Suppressed values are re-coded to the NA answer option; records with data suppression are never removed.
For questions, please contact Ask SRRG (eocevent394@cdc.gov).
COVID-19 data are available to the public as summary or aggregate count files, including total counts of cases and deaths by state and by county. These
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The Data Cleansing Tools market is rapidly evolving as businesses increasingly recognize the importance of data quality in driving decision-making and strategic initiatives. Data cleansing, also known as data scrubbing or data cleaning, involves the process of identifying and correcting errors and inconsistencies in
The main objective of this project is to collect household data for the ongoing assessment and monitoring of the socio-economic impacts of COVID-19 on households and family businesses in Vietnam. The estimated field work and sample size of households in each round is as follows:
Round 1 June fieldwork- approximately 6300 households (at least 1300 minority households) Round 2 August fieldwork - approximately 4000 households (at least 1000 minority households) Round 3 September fieldwork- approximately 4000 households (at least 1000 minority households) Round 4 December- approximately 4000 households (at least 1000 minority households) Round 5 - pending discussion
National, regional
Households
Sample survey data [ssd]
The 2020 Vietnam COVID-19 High Frequency Phone Survey of Households (VHFPS) uses a nationally representative household survey from 2018 as the sampling frame. The 2018 baseline survey includes 46980 households from 3132 communes (about 25% of total communes in Vietnam). In each commune, one EA is randomly selected and then 15 households are randomly selected in each EA for interview. Out of the 15 households, 3 households have information collected on both income and expenditure (large module) as well as many other aspects. The remaining 12 other households have information collected on income, but do not have information collected on expenditure (small module). Therefore, estimation of large module includes 9396 households and are representative at regional and national levels, while the whole sample is representative at the provincial level.
We use the large module of to select the households for official interview of the VHFPS survey and the small module households as reserve for replacement. The sample size of large module has 9396 households, of which, there are 7951 households having phone number (cell phone or line phone).
After data processing, the final sample size is 6,213 households.
Computer Assisted Telephone Interview [cati]
The questionnaire for Round 1 consisted of the following sections Section 2. Behavior Section 3. Health Section 4. Education & Child caring Section 5A. Employment (main respondent) Section 5B. Employment (other household member) Section 6. Coping Section 7. Safety Nets Section 8. FIES
Data cleaning began during the data collection process. Inputs for the cleaning process include available interviewers’ note following each question item, interviewers’ note at the end of the tablet form as well as supervisors’ note during monitoring. The data cleaning process was conducted in following steps:
• Append households interviewed in ethnic minority languages with the main dataset interviewed in Vietnamese.
• Remove unnecessary variables which were automatically calculated by SurveyCTO
• Remove household duplicates in the dataset where the same form is submitted more than once.
• Remove observations of households which were not supposed to be interviewed following the identified replacement procedure.
• Format variables as their object type (string, integer, decimal, etc.)
• Read through interviewers’ note and make adjustment accordingly. During interviews, whenever interviewers find it difficult to choose a correct code, they are recommended to choose the most appropriate one and write down respondents’ answer in detail so that the survey management team will justify and make a decision which code is best suitable for such answer.
• Correct data based on supervisors’ note where enumerators entered wrong code.
• Recode answer option “Other, please specify”. This option is usually followed by a blank line allowing enumerators to type or write texts to specify the answer. The data cleaning team checked thoroughly this type of answers to decide whether each answer needed recoding into one of the available categories or just keep the answer originally recorded. In some cases, that answer could be assigned a completely new code if it appeared many times in the survey dataset.
• Examine data accuracy of outlier values, defined as values that lie outside both 5th and 95th percentiles, by listening to interview recordings.
• Final check on matching main dataset with different sections, where information is asked on individual level, are kept in separate data files and in long form.
• Label variables using the full question text.
• Label variable values where necessary.
The target for Round 1 is to complete interviews for 6300 households, of which 1888 households are located in urban area and 4475 households in rural area. In addition, at least 1300 ethnic minority households are to be interviewed. A random selection of 6300 households was made out of 7951 households for official interview and the rest as for replacement. However, the refusal rate of the survey was about 27 percent, and households from the small module in the same EA were contacted for replacement and these households are also randomly selected.
CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
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Sample data for exercises in Further Adventures in Data Cleaning.