31 datasets found
  1. m

    A dataset for machine learning research in the field of stress analyses of...

    • data.mendeley.com
    • narcis.nl
    Updated Jul 25, 2020
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    Jaroslav Matej (2020). A dataset for machine learning research in the field of stress analyses of mechanical structures [Dataset]. http://doi.org/10.17632/wzbzznk8z3.2
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    Dataset updated
    Jul 25, 2020
    Authors
    Jaroslav Matej
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    The dataset is prepared and intended as a data source for development of a stress analysis method based on machine learning. It consists of finite element stress analyses of randomly generated mechanical structures. The dataset contains more than 270,794 pairs of stress analyses images (von Mises stress) of randomly generated 2D structures with predefined thickness and material properties. All the structures are fixed at their bottom edges and loaded with gravity force only. See PREVIEW directory with some examples. The zip file contains all the files in the dataset.

  2. Z

    Synthetic Dataset of Cardiac Microbundles

    • data.niaid.nih.gov
    • zenodo.org
    Updated Jun 18, 2024
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    Kobeissi, Hiba (2024). Synthetic Dataset of Cardiac Microbundles [Dataset]. https://data.niaid.nih.gov/resources?id=zenodo_12008741
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    Dataset updated
    Jun 18, 2024
    Dataset provided by
    Lejeune, Emma
    Kobeissi, Hiba
    License

    MIT Licensehttps://opensource.org/licenses/MIT
    License information was derived automatically

    Description

    The synthetic microbundle dataset consists of 60 200x256x256 ".tif" files generated based on textures extracted from real data and warped according to experimentally-informed Finite Element (FE) simulations. More details about generating this dataset can be found on the dedicated GitHub repository.

  3. Synthetic dataset of fiber speckles - Augmented

    • kaggle.com
    Updated Nov 4, 2022
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    Juan David Arango Moreno (2022). Synthetic dataset of fiber speckles - Augmented [Dataset]. http://doi.org/10.34740/kaggle/dsv/4450122
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    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Nov 4, 2022
    Dataset provided by
    Kagglehttp://kaggle.com/
    Authors
    Juan David Arango Moreno
    Description

    Modal interference is reflected in the speckle pattern that can be obtained at the output of a multimode fiber. This pattern contains important information, since the interference between the modes propagating through the fiber will be affected depending on some perturbations along the fiber [1]–[3]. There are different variables that can be measured by means of these specklegrams that affect the propagation of the modes, among them is the temperature. This dataset contains different speckles that vary according to a thermal change in the fiber acquired by finite element simulation (FEM).

    This augmented dataset contains a total of 138230 specklegrams. This is composed of the 601 simulated images (of the previous dataset), from each of these 45 random rotations are performed, and from each original or rotated image 4 new ones are created with random Gaussian noise (this has a random variance value between 1 and 15). Figure 1 shows the nomenclature of the dataset files.

    https://drive.google.com/uc?export=view&id=1CKMlssmoy2b2Ck-m4_cgAehkx19UH9sX" alt="">

    Fig. 1. Nomenclature of the tiff images in the dataset. Note that the letter in red and blue corresponds to the only elements that change in the file names (data index and temperature). 'type' refers to one of three image types: S: simulated (original). SR: simulated and rotated. SRN: simulated, rotated and with Gaussian noise.


    [1] A. Hoyos, N. D. Gómez, and J. A. Gómez, “Fiber specklegram sensors (FSS) for measuring high frequency mechanical perturbations,” Nov. 2013, p. 8785BH, doi: 10.1117/12.2026075. [2] Y. Liu, G. Li, Q. Qin, Z. Tan, M. Wang, and F. Yan, “Bending recognition based on the analysis of fiber specklegrams using deep learning,” Opt. Laser Technol., vol. 131, Nov. 2020, doi: 10.1016/j.optlastec.2020.106424. [3] J. D. Arango et al., “Numerical study using finite element method for the thermal response of fiber specklegram sensors with changes in the length of the sensing zone,” Comput. Opt., vol. 45, no. 4, pp. 534–540, 2021, doi: 10.18287/2412-6179-CO-852.

  4. Finite element dataset and Artificial Neural Networks algorithms to predict...

    • zenodo.org
    Updated Apr 6, 2024
    + more versions
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    Bassam Daou; Bassam Daou (2024). Finite element dataset and Artificial Neural Networks algorithms to predict the mechanical properties of innovative CLT [Dataset]. http://doi.org/10.5281/zenodo.10935906
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    Dataset updated
    Apr 6, 2024
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Bassam Daou; Bassam Daou
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This folder includes the data collected from the finite element simulations of the innovative CLT to compute its mechanical properties, the error of the closed-form solutions predicting the bending stiffness in the minor direction D22, the variation of the distance between the Reissner Mindlin and Bending Gradient theory in terms of spacing between lateral lamellas, the hyperparameters tuning of several Artificial Neural Networks algorithms with or without prior knowledge, the ML evaluations, the saved artificial neural network algorithms to predict each mechanical property of innovative CLT, and the ML application to use it.

  5. i

    Data from: Dataset for Iron Losses of IPMSMs

    • ieee-dataport.org
    Updated Dec 29, 2022
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    Yuki Shimizu (2022). Dataset for Iron Losses of IPMSMs [Dataset]. https://ieee-dataport.org/documents/dataset-iron-losses-ipmsms
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    Dataset updated
    Dec 29, 2022
    Authors
    Yuki Shimizu
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    V-

  6. m

    Ti-6Al-4V synthetic microstructure instantiations and CPFEM derived...

    • data.mendeley.com
    Updated Jun 30, 2020
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    Krzysztof Stopka (2020). Ti-6Al-4V synthetic microstructure instantiations and CPFEM derived properties [Dataset]. http://doi.org/10.17632/pzwzkk32kz.1
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    Dataset updated
    Jun 30, 2020
    Authors
    Krzysztof Stopka
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This data set includes synthetic microstructure instantiations generated using Dream.3D and their crystal plasticity finite element method (CPFEM) derived homogenized properties (elastic stiffness and yield strength determined using the 0.2% offset method). Eight different crystallographic textures were used with different volume fraction combinations of primary alpha phase and colony phase, with 30 instantiations per configuration. This data set is associated with the work by Stopka, Kalidindi and McDowell.

  7. p

    Data from: Prediction of Pavement Damage under Truck Platoons Utilizing a...

    • purr.purdue.edu
    Updated Dec 2, 2024
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    Aravind Ramakrishnan; Fangyu Liu; Angeli Jayme; Imad Al-Qadi (2024). Prediction of Pavement Damage under Truck Platoons Utilizing a Combined Finite Element and Artificial Intelligence Model [Dataset]. http://doi.org/10.4231/Z5RS-KZ82
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    Dataset updated
    Dec 2, 2024
    Dataset provided by
    PURR
    Authors
    Aravind Ramakrishnan; Fangyu Liu; Angeli Jayme; Imad Al-Qadi
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    This study utilized a conventional Burger’s model, incorporating a nonlinear power-law dashpot. A new load-pass approach enabled a reduction in computational domain and cost. A graph neural network was established to extend the framework.

  8. f

    Data from: Free vibration analysis and optimal design of adhesively bonded...

    • scielo.figshare.com
    jpeg
    Updated Feb 12, 2024
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    Qi Guo; Suian Wang (2024). Free vibration analysis and optimal design of adhesively bonded double-strap joints by using artificial neural networks [Dataset]. http://doi.org/10.6084/m9.figshare.14325270.v1
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    jpegAvailable download formats
    Dataset updated
    Feb 12, 2024
    Dataset provided by
    SciELO journals
    Authors
    Qi Guo; Suian Wang
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Abstract This study investigates the free vibration characteristics of an adhesively bonded double-strap joint with viscoelastic adhesive layer. To simplify the spatial finite element mesh generation and efficiently model the adhesively bonded joint, a layerwise plate finite element was extended to accommodate to the modeling of the joint, where the joint structure is treated as a special sandwich laminate. The proposed method was validated by three-dimensional finite element analysis and then applied to generate sampling points for training artificial neural networks (ANNs). The effects of the adhesive material properties and joint geometrical parameters on the joint dynamic characteristics were investigated in detail using the trained ANNs. The optimum design problem is defined as a multi-objective optimization problem considering maximizing the first natural frequency and corresponding loss factor while minimizing the total structural weight. The nondominated sorting genetic algorithm combined with the ANNs were employed to tackle the problem. The proposed method provides a computationally efficient alternative for analyzing and optimizing the adhesive double-strap joints.

  9. f

    Data from: A Characterization of Hot Flow Behaviors of Invar36 Alloy by an...

    • scielo.figshare.com
    jpeg
    Updated Feb 12, 2024
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    Zhen-yu Zou; Tao Li; Xiao-bo Zhang; Wei-tao Zheng; Yi Zhang; Yong-bing Zhang (2024). A Characterization of Hot Flow Behaviors of Invar36 Alloy by an Artificial Neural Network with Back-Propagation Algorithm [Dataset]. http://doi.org/10.6084/m9.figshare.14306001.v1
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    jpegAvailable download formats
    Dataset updated
    Feb 12, 2024
    Dataset provided by
    SciELO journals
    Authors
    Zhen-yu Zou; Tao Li; Xiao-bo Zhang; Wei-tao Zheng; Yi Zhang; Yong-bing Zhang
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    In order to investigate the hot deformation behaviors of Invar36 alloy, isothermal compressive tests were conducted on a Gleeble 1500 thermo-mechanical simulator at the temperatures of 873, 948, 1023, 1098 and 1173 K and the strain rates of 0.01, 0.1, 1 and 10 s−1. The effects of strain, temperature and strain rate on flow stress were analyzed, and a dynamic recrystallization type softening characteristic with unimodal flow behavior is determined. An artificial neural network based on back-propagation algorithm was proposed to handle the complex deformation behavior characteristics. The ANN model was evaluated in terms of correlation coefficient and average absolute relative error. A comparative study was performed on ANN model and constitutive equation by regression method for Invar36 alloy. Finally, the ANN model was applied to the finite element simulation, and an experimental study on trial hot forming of a V-shaped part was conducted to demonstrate the precision of the finite element simulation based on predicted flow stress data by ANN model. The results have sufficiently showed that the well-trained ANN model with BP algorithm is able to deal with the complex flow behaviors of Invar36 alloy and has great application potentiality in hot deformation.

  10. f

    Data from: EVALUATION OF A BONE REINFORCEMENT TECHNIQUE USING FINITE ELEMENT...

    • scielo.figshare.com
    jpeg
    Updated Jun 1, 2023
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    ANDERSON FREITAS; LUCAS CARREIRO DA SILVA; NATHAN DRUMOND VASCONCELOS GODINHO; AMIRHOSSEIN FARVARDIN; MEHRAN ARMAND; ANA PATRÍCIA DE PAULA (2023). EVALUATION OF A BONE REINFORCEMENT TECHNIQUE USING FINITE ELEMENT ANALYSIS [Dataset]. http://doi.org/10.6084/m9.figshare.6503336.v1
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    jpegAvailable download formats
    Dataset updated
    Jun 1, 2023
    Dataset provided by
    SciELO journals
    Authors
    ANDERSON FREITAS; LUCAS CARREIRO DA SILVA; NATHAN DRUMOND VASCONCELOS GODINHO; AMIRHOSSEIN FARVARDIN; MEHRAN ARMAND; ANA PATRÍCIA DE PAULA
    License

    Attribution-NonCommercial 4.0 (CC BY-NC 4.0)https://creativecommons.org/licenses/by-nc/4.0/
    License information was derived automatically

    Description

    ABSTRACT Objectives: To compare the results of a simulated fall on the greater trochanter in the proximal portion of a synthetic femur before and after femoral reinforcement with tricalcium phosphate bone cement (TP) and polymethyl methacrylate (PMMA), using finite element analysis (FEA). Methods: Using two synthetic proximal femurs, a FEA simulating a fall on the greater trochanter was performed, using the Bi-directional Evolutionary Structural Optimization (BESO) program. For this analysis, the femurs were filled with TP and PMMA after perforations were created in the trochanteric region and neck. The results were compared with the strength values obtained from testing the control specimen, a synthetic bone without reinforcement. Results: FEA showed a value of 600 N prior to reinforcement. After cementing with PMMA, the load increased by 57.5% (945 N), and by 53% (920 N) after cementing with TP. Conclusion: Synthetic femurs gained resistance to fracture-causing forces in a simulated fall on the trochanter after bone reinforcement with PMMA and TP. Level of Evidence III; Experimental study.

  11. m

    Data of synthetic 3D models of the human jaw, including teeth, ligaments,...

    • data.mendeley.com
    Updated Sep 12, 2024
    + more versions
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    CRISTIAN DIAZ (2024). Data of synthetic 3D models of the human jaw, including teeth, ligaments, and bone structures [Dataset]. http://doi.org/10.17632/xjsx7nfhj8.1
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    Dataset updated
    Sep 12, 2024
    Authors
    CRISTIAN DIAZ
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    All necessary files are included in this dataset to obtain the complete geometry of a human jaw, which includes the 14 teeth and the corresponding 14 periodontal ligaments. Models of the alveolar and cortical bones, as well as the teeth and ligaments, have been attached individually at the bone level. These models are accessible in the following formats:.iges,.stl, and.sedoc. Furthermore, a file containing the entire assembly of all of these geometries is included, and it is prepared for use in Space Claim. This configuration provides the advantage of allowing the models to be utilized in any finite element analysis software to investigate stresses and deformations in maxillofacial surgery or orthodontic research. This dataset contains STL and IGES files for finite element model simulations of the mandible, teeth, and ligaments in environments where it is desirable to understand the stresses or deformations of these structures for biomechanical assessment. The dataset is divided into three primary folders. The initial folder, "Bones," contains two subfolders: "Cancellous" and "Cortical." Each of these subfolders contains three files that represent models in distinct formats:.iges,.stl, and.sedoc. The latter is a native format of the Space Claim software from ANSYS R1 2020. The second folder, "PDL," contains the periodontal ligament models for teeth 37 to 47 in the same three formats as previously mentioned. These models are identified by a nomenclature that commences with the letter L and is followed by the corresponding tooth number. The third folder, "Teeth," contains the models of the mandibular teeth 37 to 47 in the same formats, with a nomenclature that begins with the letter D followed by the tooth number. Furthermore, the "Assembly Lower Jaw Dataset Space Claim" file is included, which contains the geometry of the entire lower jaw assembly, including its 14 teeth and 14 periodontal ligaments.

  12. i

    Data from: Dataset for motor parameters of IPMSM

    • ieee-dataport.org
    Updated Sep 22, 2022
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    Yuki Shimizu (2022). Dataset for motor parameters of IPMSM [Dataset]. https://ieee-dataport.org/documents/dataset-motor-parameters-ipmsm
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    Dataset updated
    Sep 22, 2022
    Authors
    Yuki Shimizu
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    V-

  13. Supplemental Data: Rapid model-guided design of organ-scale synthetic...

    • zenodo.org
    bin
    Updated Jun 4, 2025
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    Zachary Sexton; Zachary Sexton; Dominic Rütsche; Dominic Rütsche; Jessica E. Herrmann; Jessica E. Herrmann; Andrew R. Hudson; Andrew R. Hudson; Sinha Soham; Sinha Soham; Jianyi Du; Jianyi Du; Daniel J. Shiwarski; Daniel J. Shiwarski; Anastasiia Masaltseva; Anastasiia Masaltseva; Fredrik Samdal Solberg; Jonathan Pham; Jonathan Pham; Jason M. Szafron; Jason M. Szafron; Sean M. Wu; Sean M. Wu; Adam W. Feinberg; Adam W. Feinberg; Mark A. Skylar-Scott; Mark A. Skylar-Scott; Alison L. Marsden; Alison L. Marsden; Fredrik Samdal Solberg (2025). Supplemental Data: Rapid model-guided design of organ-scale synthetic vasculature for biomanufacturing [Dataset]. http://doi.org/10.5281/zenodo.15588568
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    binAvailable download formats
    Dataset updated
    Jun 4, 2025
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Zachary Sexton; Zachary Sexton; Dominic Rütsche; Dominic Rütsche; Jessica E. Herrmann; Jessica E. Herrmann; Andrew R. Hudson; Andrew R. Hudson; Sinha Soham; Sinha Soham; Jianyi Du; Jianyi Du; Daniel J. Shiwarski; Daniel J. Shiwarski; Anastasiia Masaltseva; Anastasiia Masaltseva; Fredrik Samdal Solberg; Jonathan Pham; Jonathan Pham; Jason M. Szafron; Jason M. Szafron; Sean M. Wu; Sean M. Wu; Adam W. Feinberg; Adam W. Feinberg; Mark A. Skylar-Scott; Mark A. Skylar-Scott; Alison L. Marsden; Alison L. Marsden; Fredrik Samdal Solberg
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Time period covered
    Apr 24, 2025
    Measurement technique
    <h1>Materials and Methods</h1> <p>Breif Overviews of the conditions and materials for data collection. </p> <h2>3D Bioprinting, Perfusion, and Viability</h2> <h3>FRESH Preparation</h3> <p>FRESH support bath was generated using a complex coacervation method as previously described (Hudson et al.). The bath was prepared by dissolving 3.0 % (w/v) gelatin type B (Fisher Scientific, G7‑500), 0.3 % (w/v) gum arabic (Sigma‑Aldrich, G9752) and 0.125 % (w/v) Pluronic® F‑127 (Sigma‑Aldrich, P2443) in 50 % (v/v) ethanol at 45 °C (1 L total volume). The pH was adjusted to 5.65 with 1 M HCl and the mixture stirred overnight at room temperature. The slurry was centrifuged (300 × g, 2 min), the ethanol supernatant discarded, and the pellet washed three times with de‑ionised water. After the final wash the supernatant was replaced with 50 mM HEPES (Corning, 60‑034‑RO) buffered to pH 7.4.</p> <p>For printing, the uncompacted support bath was degassed for 30 min and centrifuged (2000 × g, 5 min) to compact the particles. The compacted slurry was transferred into the desired print container. A bio‑ink of 23 mg mL⁻¹ acidified collagen type I was obtained by diluting a 35 mg mL⁻¹ stock (LifeInk 240, Advanced Biomatrix, 5267) 2:1 with sterile water. FRESH printing was carried out on a custom 3‑axis bioprinter (Aerotech) fitted with a 30 G needle (150 µm ID, Jensen Global JG30‑0.5HPX) and a 2.5 mL glass gastight syringe (Hamilton 81401).</p> <h2>Planar Dye Perfusion</h2> <p>A peristaltic pump (Ismatec, EW‑95663‑34) equipped with 1.42 mm ID peristaltic tubing (Cole‑Parmer, EW‑95663‑34) and 1/16 in ID silicone tubing (Cole‑Parmer, EW‑95802‑02) was connected to the bioreactor inlet; the outlet tubing returned to the reservoir. Black food dye (McCormick 052100581873) was perfused at 250 µL min⁻¹ through the collagen FRESH‑printed vascular network housed in a custom bioreactor, following Hudson et al.</p> <h2>3D‑Print Code Generation for FRESH</h2> <p>The simulated vascular network was Boolean‑subtracted from a solid tissue block in Autodesk Fusion 360 to generate a perfusable cavity. STL files were sliced in Ultimaker Cura (layer height 60 µm; print speed 15–50 mm s⁻¹; 3 perimeters; 3 top/bottom layers; 35 % infill; 95 % extrusion multiplier; 0.1 mm retraction). The resulting G‑code was pasted into an Aerotech BASIC script for execution on the bioprinter.</p> <h2>OCT Imaging and 3 D Gauging</h2> <p>OCT was performed as described by Tashman et al. 2023. 3‑D volumes were acquired with a Thorlabs Vega 1300 nm system (VEG210C1) and OCT‑LK4 objective, using the highest signal settings that avoided artefacts. Stacks were exported as 32‑bit TIFF, background‑subtracted and denoised in Fiji/ImageJ, then segmented in 3D Slicer using the Grow from seeds tool. The segmented STL was compared to the original CAD STL in CloudCompare; distance deviations were visualised as false‑colour maps and histograms.</p> <h2>Bright‑ and Dark‑Field Imaging of FRESH Prints</h2> <p>Bright‑/dark‑field images were captured with a Leica M165 FC stereomicroscope (1 × objective) and a Prime 95B camera (Photometrics) controlled by µManager 2.0. Images were saved as TIFF for analysis.</p> <h2>Granular Hydrogel Preparation</h2> <p>Both support matrix and ink were made from Carbopol® 974P NF (Lubrizol CBP1053H) at 0.2 wt %. Carbopol (2 g) and NaOH (0.8 g) were dispersed in 100 mL water and mixed at 1500–2000 rpm in a FlackTek SpeedMixer for 2 min, then diluted 10 × with water and stirred overnight (685–950 rpm). For visualisation, Pearl Ex Magenta pigment (2 wt %) was added to the ink formulation. Clear Carbopol support was transferred to an acrylic box; pigmented ink was loaded into a 5 mL syringe (Hamilton 81520) fitted with a 30 G stainless‑steel tip (Nordson 7018433, 0.15 mm ID).</p> <h2>G‑code Generation for Granular Hydrogel Printing</h2> <p>3‑D coordinates exported from SimVascular were converted to G‑code with a custom Python script and then to Aerobasic for an Aerotech A3200 controller driving a custom three‑axis printer with four print‑heads. Printed networks were photographed with a Canon EOS 5D Mark IV and 180 mm macro lens. The network shown in Figure 5J was printed at 0.2 wt % Carbopol, scaled 1.5 ×.</p> <h2>Fabrication of a 2.5‑D Perfusable Model for PIV</h2> <p>The CFD design was flattened to a 2.5‑D geometry and fabricated via sacrificial writing into functional tissue (SWIFT). A PDMS support bath (Sylgard SE1700 : 527 : 184 in 2 : 1 : 1 w/w/w) was degassed and loaded into a rectangular mould. Hydrophobic fumed‑silica ink (6 % w/v TS‑720 in mineral oil) was extruded with a custom printer following G‑code. Inlet/outlet ports were created with 22 G pins. The construct was cured 1 h at 60 °C, mineral oil removed with xylene flush, and channels rinsed with PBS before perfusing 2 % FITC‑dextran. Three identical models were produced.</p> <h2>Particle Imaging Velocimetry (PIV)</h2> <p>Tracer fluid (water : glycerol : 10 µm beads, 25:50:3 by volume; final bead concentration ≈ 1.4 × 10⁵ mL⁻¹) was homogenised in a SpeedMixer (2500 rpm, 30 s). The channel network was cleared at 200 µL min⁻¹, then measured at 50 µL min⁻¹. Videos were acquired at 20 Hz with a Nikon Ts‑2R epifluorescence microscope and sCMOS camera (Teledyne Photometrics Kinetix). Frames were differenced, Gaussian‑filtered, and processed with trackpy to obtain velocity fields. Flow rates were calculated by fitting parabolic profiles (Hagen–Poiseuille) as in Du et al. 2023.</p> <h2>Synthesis and Characterisation of Alginate Methacrylate</h2> <p>Alginate methacrylate was synthesised by reacting 2 % (w/v) alginate with methacrylic anhydride at pH 7 for 72 h, precipitating in cold ethanol, dialysing (14 kDa MWCO, 3 d) and lyophilising. Vinyl substitution was confirmed by ¹H NMR (Bruker Avance Neo 500 MHz, 256 scans) showing Ha/Hb signals at 5.75–6.25 ppm.</p> <h2>Cell Culture</h2> <p>HEK293 cells (passages 8–10) were maintained in DMEM + 10 % FBS + 1 × pen‑strep. Cells were sub‑cultured at 70–90 % confluence using TrypLE Express, pelleted (300 × g, 3 min) and counted for bioprinting.</p> <h2>Bioprinting of Acellular Vascular Trees and Perfusion Assay</h2> <p>A 4 % (w/v) alginate‑methacrylate / 2 % Carbopol 971P NF / 0.1 % LAP support matrix was prepared and degassed. Ten‑vessel vascular networks were printed into 25 mL matrices in 25 × 25 × 30 mm acrylic containers using sacrificial 2 % Carbopol + 0.1 % FITC‑dextran + 5 % magenta UV powder ink (31 G nozzle, 8 psi). Constructs were photocross‑linked (405 nm, 1 min), channels cleared with PBS, and perfused with 0.5 % FITC‑dextran at 0–1000 µL min⁻¹ via a Masterflex Ismatec Reglo pump.</p> <h2>Nested Embedded 3‑D Bioprinting</h2> <p>Perfused models employed a support matrix of 0.7 % alginate‑MA / 1.4 % Carbopol / 0.5 % PEGDA (20 kDa) / 0.1 % LAP in Ca²⁺‑free PBS. A cell‑laden bio‑ink (3.2 % alginate‑MA / 2.4 % Carbopol / 2 % PEGDA / 0.1 % LAP, HEK293 1 × 10⁷ cells mL⁻¹) was printed as a concentric‑ring annulus (outer Ø 20 mm, inner Ø 8 mm, 18 mm height). A FRESH‑based sacrificial ink was then printed to generate a 25‑vessel network. Constructs were cross‑linked (405 nm, 2 min) and perfused with DMEM +/+ (1000 µL min⁻¹) for 7 d using a custom housing. Non‑perfused controls were cultured statically in DMEM +/+ or PBS.</p> <h2>Viability Assay</h2> <p>After 7 d, constructs were bisected and stained with LIVE/DEAD (Calcein‑AM / EthD‑1). Confocal z‑stacks (Zeiss LSM 980) were processed to compute viability maps and radial distributions using custom MATLAB scripts (details in Supplementary Figure S15). Viability was calculated as L / (L + D) using cell‑area normalisation (mean live cell area ≈ 207.9 µm²; dead ≈ 220.4 µm²).</p> <h2>Micro‑Computed Tomography (µCT)</h2> <p>A 20 % (w/v) BaSO₄ / 2 % Carbopol ink was printed into 1 % Carbopol support and imaged on a Bruker SkyScan 1276 (85 kV, 200 µA, 0.4° rotation, 1 mm Al filter). STLs were reconstructed with NRecon, exported from 3D Slicer, and Hausdorff distances calculated in MeshLab.</p> <h2>Confocal Microscopy</h2> <p>LIVE/DEAD and evacuated channels were imaged on a Zeiss LSM 980 (1024² pixels). Imaging volumes: viability, 3394 × 3394 × 515 µm (z‑step = 10 µm, tile scan with 10 % overlap); evacuated channels, 5656 × 5656 × 4335 µm (z‑step = 15 µm). Analyses were performed on summed z‑projections.</p> <h2>Statistical Analysis</h2> <p>Statistics were performed in GraphPad Prism 9.6.1 and scipy 1.3.1. Unpaired Welch‑corrected t‑tests were used for multiple comparisons (α = 0.05). KL‑divergence was calculated as described previously; significance: p < 0.05 *, < 0.01 **, < 0.001 ***.</p> <h2>Synthetic Vasculature Performance Testing</h2> <p>Performance benchmarks were executed on a Dell Precision 7920 (Windows 10, Intel® Xeon® Gold 5220, 2.2 GHz). Serial CCO generation timing followed the benchmark of Cury et al. 2021 for direct comparison.</p>
    Description

    Supplemental Dataset: Synthetic Vascular Model Generation, Multiscale CFD Simulation, and In Vitro Viability Analysis

    This repository accompanies the article “Rapid, model-driven design of organ-scale vascular networks for perfused bioprinted tissues.”
    It contains every geometry, computational-fluid-dynamics (CFD) result, image analysis and post-processing script required to reproduce the figures in the main text and Supplementary Information. The data trace the complete workflow—from algorithmic vascular-tree construction with svv, through 0-D/3-D CFD analysis, to quantitative figure generation—and offer ready-to-use models for new design studies.

    Table of Contents

    1. Data & File Structure
    2. Materials & Methods
    3. Sharing & Access
    4. Code & Software

    Data & File Structure

    The archive unpacks into a single root folder:
    Selected folders a files (input files and python code) are shown here:

    adj6152_data/
    Main/
    Main Figures/
    Figure 1/
    cube/
    heart/
    Figure_1c.py
    Figure_1d.py
    Figure_1e.py
    Figure_1f.py
    Figure_1g.py
    Figure 2/
    Fig. 2C/
    Fig. 2F/
    Fig. 2H-I/
    Figure 3/
    anulus_0d_simulation/
    timeseries/
    timeseries_for_flow_gif/
    timeseries_for_pressure_gif/
    timeseries_for_wss_gif/
    inflow.flow
    plot_0d_results_at_slices.py
    plot_0d_results_to_3d.py
    run.py
    solver_0d.in
    wave.flow
    cube_0d_simulation/
    timeseries/
    timeseries_for_flow_gif/
    timeseries_for_pressure_gif/
    timeseries_for_wss_gif/
    inflow.flow
    plot_0d_results_at_slices.py
    plot_0d_results_to_3d.py
    run.py
    solver_0d.in
    wave.flow
    gyrus_0d_simulation/
    timeseries/
    timeseries_for_flow_gif/
    timeseries_for_pressure_gif/
    timeseries_for_wss_gif/
    inflow.flow
    plot_0d_results_at_slices.py
    plot_0d_results_to_3d.py
    run.py
    solver_0d.in
    wave.flow
    heart_0d_simulation/
    timeseries/
    timeseries_for_flow_gif/
    timeseries_for_pressure_gif/
    timeseries_for_wss_gif/
    inflow.flow
    plot_0d_results_at_slices.py
    plot_0d_results_to_3d.py
    run.py
    solver_0d.in
    wave.flow
    Figure 4/
    Figure (Data)/
    Fig 4.A/
    Model 10000/
    Model 100000/
    Model 1000000/
    Fig 4.B/
    Model 10000/
    Model 100000/
    Model 1000000/
    Fig 4.C - Biventricular Model/
    Processed/
    Raw/
    Fig 4.D - Annulus Model/
    Processed/
    Raw/
    Figure 5/
    Figure (Data)/
    Fig. 5D-F/
    raw data.zip
    Fig. 5G-J/
    Vessel_Printing_65/
    Images/
    Meshes/
    Models/
    Paths/
    ROMSimulations/
    Segmentations/
    Simulations/
    cross_sections/
    cross_sections_2/
    cross_sections_3/
    cross_sections_12/
    cross_sections_22/
    post_results_1/
    post_results_2/
    pulsatile_deformable_wall/
    pulsatile_elastic_wall/
    pulsatile_flow/
    centerlines.txt
    color_branches.py
    create_graph.py
    read_centerlines.py
    slice_data.py
    visualize_deformation.py
    svFSI/
    inflow.flow
    simvascular.proj
    multimaterial_test_network_65_vessels (1).txt
    Fig. 5K/
    Photos/
    Fig. 5L/
    Processes/
    Fig. 5M/
    Analysis/
    Data (Raw, Processed)/
    Annulus/
    Raw, Reconstructed/
    Annulus_Vasculature/
    Photos/
    Vasculature/
    Vascular 1/
    Raw/
    Reconstructed/
    Vascular 2/
    Fig. 5O/
    Photos/
    Renderings/
    Fig. 5P/
    Fig. 5P i/
    Photos/
    Fig. 5P ii/
    Analysis/
    MATLAB/
    Processed Data/
    Fig. 5P iii/
    Analysis/
    Fig. 5P iv/
    Analysis/
    Fig. 5P v/
    Analysis/
    MATLAB/
    Processed Data/
    Re-Scaled Data (per cell counts)/
    Fig. 5P vi/
    Analysis/
    MATLAB/
    Processed Data/
    Supplement Materials/
    Supplementary Figures/
    Fig. S1/
    cube_opposite_diagonal_source_sink/
    cube_same_side_diagonal_source_sink/
    timeseries/
    timeseries_for_flow_gif/
    timeseries_for_pressure_gif/
    timeseries_for_wss_gif/
    inflow.flow
    plot_0d_results_to_3d.py
    README.txt
    SF2.py
    solver_0d.in
    Fig. S2/
    svcco/
    array_vs_linked_list.py
    Fig. S3/
    BFGS/
    COBYLA/
    L-BFGS-B/
    Nelder-Mead/
    Newton-CG/
    Powell/
    SLSQP/
    TNC/
    trust-ncg/
    get_data.py
    test_optimizers.py
    Fig. S4/
    svcco/
    global_pu_time.py
    implicit_accuracy_number_patches.py
    implicit_condition_number.py
    Fig. S5/
    brain_reconstructions/
    brain_regions/
    engineering_shapes/
    svcco/
    figure_code.py
    figure_writer.py
    Fig. S6/
    svcco/
    corner_recovery.py
    patch_functions.py
    Fig. S7/
    svcco/
    point_enclosure.py
    Fig. S8/
    brain_data/
    convex_data/
    svcco/
    build_times_figure.py
    Fig. S9/
    Anterior Commissure/
    output/
    generate_tree.py
    Branchium of Left Inferior Colliculus/
    output/
    generate_tree.py
    Commissure of Fornix of Forebrain/
    output/
    generate_tree.py
    Fourth Ventricle/
    output/
    generate_tree.py
    Hypothalamus/
    output/
    generate_tree.py
    Lamina Terminalis/
    output/
    generate_tree.py
    Left Globus Pallidus/
    output/
    generate_tree.py
    Left Inferior Frontal Gyrus/
    output/
    generate_tree.py
    Left Internal Capsule/
    output/
    generate_tree.py
    Left Olfactory Tract/
    output/
    generate_tree.py

  14. Dataset for article "Fatigue crack initiation and propagation relation at...

    • zenodo.org
    • data.niaid.nih.gov
    Updated Apr 5, 2022
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    Moritz Braun; Moritz Braun; Claas Fischer; Claas Fischer; Jörg Baumgartner; Jörg Baumgartner; Matthias Hecht; Igor Varfolomeev; Matthias Hecht; Igor Varfolomeev (2022). Dataset for article "Fatigue crack initiation and propagation relation at notched specimens with welded joint characteristics" [Dataset]. http://doi.org/10.5281/zenodo.6020696
    Explore at:
    Dataset updated
    Apr 5, 2022
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Moritz Braun; Moritz Braun; Claas Fischer; Claas Fischer; Jörg Baumgartner; Jörg Baumgartner; Matthias Hecht; Igor Varfolomeev; Matthias Hecht; Igor Varfolomeev
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    The dataset presents is a collection of fatigue test data obtained from artificially notched specimens with weld characteristics. The data was used to investigate the relation between crack initiation and propagation in welded joints of different notch acuity (different radii and opening angle) by excluding the effect of geometrical variation along weld seams. The experiments show that the investigated relationship basically depends on the notch acuity, the load level and the stress ratio.

    For detailed information about the tests and the assessment please refer to the article:

    Braun M, Fischer C, Baumgartner J, Hecht M, Varfolomeev I. Fatigue Crack Initiation and Propagation Relation of Notched Specimens with Welded Joint Characteristics. Metals. 2022; 12(4):615. https://doi.org/10.3390/met12040615

  15. m

    Data from structural testing of sprayed and cast shotcrete reinforced with...

    • data.mendeley.com
    Updated Mar 20, 2025
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    Andreas Sjölander (2025). Data from structural testing of sprayed and cast shotcrete reinforced with fibres of steel, basalt and synthetic material [Dataset]. http://doi.org/10.17632/d7n5mvb2sg.2
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    Dataset updated
    Mar 20, 2025
    Authors
    Andreas Sjölander
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    In this dataset, data from experimental testing of fibre-reinforced shotcrete is presented. The dataset contains results from four different fibres made of steel (Dramix 3D and Dramix 4D), synthetic (BarChip R54) and basalt (MiniBar). Preparation of specimens and testing were performed by Vattenfall R&D in Älvkarleby, Sweden. This second version of the dataset contains the results for shotcrete specimens prepared through casting and spraying. The same shotcrete mix was used for all specimens, and three different dosages were used for each of the fibres. The dataset contains the shotcrete mix and standard output for the test of compressive strength according to EN 12390-3, residual flexural strength according to EN 14488-3 and energy absorption according to ASTM C1550. Raw data, i.e. force-displacement curves from testing, are also available.

    This dataset can be used to study how the structural performance of fibre-reinforced shotcrete is affected by the dosage of fibre. Moreover, the data can be used to verify and tune non-linear material models using the finite element method. The data also provide a foundation to select a reasonable dosage of fibres to fulfil the structural requirements put on shotcrete in the design phase.

    A data paper entitled "Dataset for evaluation and numerical modelling of structural performance of fibre-reinforced shotcrete with fibres of steel, synthetic and basalt" is currently under review in Data in Brief and, if accepted, a link to the paper will be added here for a more thorough description.

  16. n

    Supplementary data set for "Three-Dimensional Time Domain Simulation of...

    • narcis.nl
    • data.mendeley.com
    Updated Dec 15, 2017
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    Minami, T (via Mendeley Data) (2017). Supplementary data set for "Three-Dimensional Time Domain Simulation of Tsunami-Generated Electromagnetic Fields: Application to the 2011 Tohoku Earthquake Tsunami" [Dataset]. http://doi.org/10.17632/c8zm4ysk5s.2
    Explore at:
    Dataset updated
    Dec 15, 2017
    Dataset provided by
    Data Archiving and Networked Services (DANS)
    Authors
    Minami, T (via Mendeley Data)
    Description

    Four data files contain processed tsunami magnetic variations at ESA, B14, NWP, and CBI. Please read Section 4.3 in the main article for the detail of the processing. The contents in each file are composed of ten columns;
    time min since 05:46 UTC on March 11, 2011, high-pass filtered XYZ at the target site (three columns), synthesized XYZ at the target site based on eq. (14) (three columns), and cleaned XYZ at the target site, i.e. data left after subtraction of synthesized data from high-pass filtered data (three columns). For a seafloor site, B14, not the high-pass filtered but just raw time-series are contained in the second to forth columns because of the shortage of the original time series at B14. Readers can easily plot the four data files by using the script, plot_CTS.sh, where CTS stands for Cleaned Time Series. The four postscript files were generated by this script.

    --

    For use of data at B14, please also refer Ichihara et al. (2013), which first reported tsunami magnetic signals at B14 during the 2011 Tohoku tsunami event.

    Ichihara, H., Hamano, Y., Baba, K., & Kasaya, T. (2013). Tsunami source of the 2011 Tohoku earthquake detected by an ocean-bottom magnetometer. Earth and Planetary Science Letters, 382, 117-124.

    --

    For use of data at NWP, please also refer Minami et al. (2013), which first reported tsunami magnetic signals at NWP during the 2011 Tohoku tsunami event.

    Minami, T., & Toh, H. (2013). Two‐dimensional simulations of the tsunami dynamo effect using the finite element method. Geophysical Research Letters, 40(17), 4560-4564.

  17. Virtual cohort of 1000 synthetic heart meshes from adult human healthy...

    • zenodo.org
    • data.niaid.nih.gov
    csv, zip
    Updated May 11, 2022
    + more versions
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    Cristobal Rodero; Cristobal Rodero; Marina Strocchi; Marina Strocchi; Maciej Marciniak; Maciej Marciniak; Stefano Longobardi; Stefano Longobardi; John Whitaker; Mark D. O'Neill; Mark D. O'Neill; Karli Gillette; Karli Gillette; Christoph Augustin; Christoph Augustin; Gernot Plank; Gernot Plank; Edward J. Vigmond; Edward J. Vigmond; Pablo Lamata; Pablo Lamata; Steven NIederer; Steven NIederer; John Whitaker (2022). Virtual cohort of 1000 synthetic heart meshes from adult human healthy population [Dataset]. http://doi.org/10.5281/zenodo.4506930
    Explore at:
    zip, csvAvailable download formats
    Dataset updated
    May 11, 2022
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Cristobal Rodero; Cristobal Rodero; Marina Strocchi; Marina Strocchi; Maciej Marciniak; Maciej Marciniak; Stefano Longobardi; Stefano Longobardi; John Whitaker; Mark D. O'Neill; Mark D. O'Neill; Karli Gillette; Karli Gillette; Christoph Augustin; Christoph Augustin; Gernot Plank; Gernot Plank; Edward J. Vigmond; Edward J. Vigmond; Pablo Lamata; Pablo Lamata; Steven NIederer; Steven NIederer; John Whitaker
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Dataset Description: We present a database of four-chamber heart models derived from a statistical shape model (SSM) suitable for electro-mechanical (EM) simulations. Our database consists of 1000 four-chamber heart models generated from end-diastolic CT-derived meshes (available in the repository called ("Virtual cohort of adult healthy four-chamber heart meshes from CT images"). These meshes were used for EM simulations. The weights of the SSM are also provided.

    Cardiac meshes: To build the SSM, we rigidly aligned the CT cohort and extracted the surfaces, representing them asdeRham currents. The registration between meshes and computation of the average shape was done using a Large Deformation Diffeomorphic Metric Mapping method. The deformation functions depend on a set of uniformly distributed control points in which the shapes are embedded, and on the deformation vectors attached to these points. It is in this spatial field of deformation vectors (one per each control point) where the Principal Component Analysis (PCA) is applied. Case #20 of the CT cohort was not included. More information on the details can be found in Supplement 3 of the reference paper. We created this cohort by modifying the weight of the modes explaining 90%of the variance in shape (corresponding to modes 1 to 9) within 2 standard deviations (SD) of each mode added to the average mesh. The elements of all the meshes are labelled as follows:

    1. Left ventricle myocardium
    2. Right ventricle myocardium
    3. Left atrium myocardium
    4. Right atrium myocardium
    5. Aorta wall
    6. Pulmonary artery wall
    7. Mitral valve plane
    8. Tricuspid valve plane
    9. Aortic valve plane
    10. Pulmonary valve plane
    11. Left atrium appendage "inlet"
    12. Left superior pulmonary vein inlet
    13. Left inferior pulmonary vein inlet
    14. Right inferior pulmonary vein inlet
    15. Right superior pulmonary vein inlet
    16. Superior vena cava inlet
    17. Inferior vena cava inlet
    18. Left atrial appendage border
    19. Right inferior pulmonary vein border
    20. Left inferior pulmonary vein border
    21. Left superior pulmonary vein border
    22. Right superior pulmonary vein border
    23. Superior vena cava border
    24. Inferior vena cava border

    Each zipped folder contains 25 meshes and the weights of modes used to construct them for each mesh, A VTK file for each mesh (in ASCII) contains an UNSTRUCTURED GRID with the following fields:

    • POINTS, with the coordinates of the points in mm.
    • CELL_TYPES, having all of the points the value 10 since they are tetrahedra.
    • CELLS, with the indices of the vertices of every element.
    • CELL_DATA, corresponding to the meshing tags.

    In addition, three descriptive files are included:

    • Normalized_explained_variance.csv contains the percentages of variance explained by each of the 18 modes generated from PCA.
    • Mode_standard_deviation.csv contains absolute standard deviations of each of the 18 modes.
    • Eigenvectors.csv contains the directions of maximum shape variability within the shape population.
  18. d

    OSU-Honda automobile hood dataset (CarHoods10k)

    • search.dataone.org
    • datadryad.org
    Updated May 17, 2025
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    Satchit Ramnath; Jami J. Shah; Patricia Wollstadt; Mariusz Bujny; Stefan Menzel; Duane Detwiler (2025). OSU-Honda automobile hood dataset (CarHoods10k) [Dataset]. http://doi.org/10.5061/dryad.2fqz612pt
    Explore at:
    Dataset updated
    May 17, 2025
    Dataset provided by
    Dryad Digital Repository
    Authors
    Satchit Ramnath; Jami J. Shah; Patricia Wollstadt; Mariusz Bujny; Stefan Menzel; Duane Detwiler
    Time period covered
    Jan 1, 2021
    Description

    The CarHoods10k data set comprises a set of over 10,000 3D mesh geometries for variants of car hood frames, generated through an automated, industry-grade Computer Aided Design (CAD) workflow described in Ramnath (2019). The data set provides realistic designs that were validated by experts with respect to realism, manufacturability, variability, and performance. Variations in geometries were generated by a feature-based approach that varies parameter values describing design features on 109 parameterized base geometries ('skins'). Parameters describe feature patterns such as cut-outs or ribs on the hood frame as well as their properties, for example, rib location and height, or cut-out location. Geometries are represented as surface meshes (STL files) and are provided with the corresponding design parameter values and performance metrics from structural mechanics, generated through finite element analysis (FEA). The data set provides realistic and validated designs for the evaluation a...

  19. m

    Dataset for SCF Prediction in CFST T- and K-Joints Using ANN

    • data.mendeley.com
    Updated Jul 16, 2025
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    Saurabh Bajracharya (2025). Dataset for SCF Prediction in CFST T- and K-Joints Using ANN [Dataset]. http://doi.org/10.17632/rp7vm5627z.1
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    Dataset updated
    Jul 16, 2025
    Authors
    Saurabh Bajracharya
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    This dataset comprises numerical investigation data for Concrete-Filled Steel Tube (CFST) T- and K-joints, sourced from studies by Zheng et al. (2018) and Zheng et al. (2019). The dataset includes key geometric and material parameters influencing the Stress Concentration Factor (SCF). Additionally, a sample Python script implementing an Artificial Neural Network (ANN) model is provided to predict the SCF at the Brace Saddle (BS) of a CFST T-joint subjected to compressive loading in the brace.

    This dataset is useful for researchers conducting numerical and machine learning-based studies on SCF behavior in CFST joints.

    Keywords Concrete Filled Steel Tubular K joints, Concrete Filled Steel Tubular T joint , Stress Concentration Factor, Finite Element Analysis, Artificial Neural Network, Multiple Regression Analysis

  20. f

    The geometric and physical parameters of the marine-sediment model.

    • plos.figshare.com
    xls
    Updated Jun 4, 2023
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    Hanbo Chen; Bin Xiong; Chi Zhang; Ziyu Cheng (2023). The geometric and physical parameters of the marine-sediment model. [Dataset]. http://doi.org/10.1371/journal.pone.0264235.t003
    Explore at:
    xlsAvailable download formats
    Dataset updated
    Jun 4, 2023
    Dataset provided by
    PLOS ONE
    Authors
    Hanbo Chen; Bin Xiong; Chi Zhang; Ziyu Cheng
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    The geometric and physical parameters of the marine-sediment model.

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Jaroslav Matej (2020). A dataset for machine learning research in the field of stress analyses of mechanical structures [Dataset]. http://doi.org/10.17632/wzbzznk8z3.2

A dataset for machine learning research in the field of stress analyses of mechanical structures

Explore at:
Dataset updated
Jul 25, 2020
Authors
Jaroslav Matej
License

Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically

Description

The dataset is prepared and intended as a data source for development of a stress analysis method based on machine learning. It consists of finite element stress analyses of randomly generated mechanical structures. The dataset contains more than 270,794 pairs of stress analyses images (von Mises stress) of randomly generated 2D structures with predefined thickness and material properties. All the structures are fixed at their bottom edges and loaded with gravity force only. See PREVIEW directory with some examples. The zip file contains all the files in the dataset.

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