3 datasets found
  1. NIHR BioResource: SNP imputation data

    • healthdatagateway.org
    unknown
    Updated Mar 31, 2021
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    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care." (2021). NIHR BioResource: SNP imputation data [Dataset]. https://healthdatagateway.org/en/dataset/389
    Explore at:
    unknownAvailable download formats
    Dataset updated
    Mar 31, 2021
    Dataset provided by
    National Health Servicehttps://www.nhs.uk/
    National Institute for Health and Care Research
    Health Data Research Uk
    Department of Health and Social Carehttps://gov.uk/dhsc
    Authors
    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care."
    License

    https://bioresource.nihr.ac.uk/using-our-bioresourcehttps://bioresource.nihr.ac.uk/using-our-bioresource

    Description

    The NIHR Bioresource consists of several groups of participants: ~70k from the general population and blood donors (COMPARE, INTERVAL and STRIDES studies); ~19k with one of ~50 rare diseases (RD) including a ~5k pilot for GEL; ~30k with Inflammatory Bowel Disease (IBD) which include the members of Gut Reaction, the Health Data Research Hub for IBD; and ~20k with Anxiety or depression (GLAD study). It intends to extend recruitment in all areas, and to other rare and common disease groups, with a target of ~300k by 2022. SNP chip data can be used to impute many of the (non-rare) SNPs not included on the chips. The NIHR BioResource is using a modified version of the UK Biobank protocol to improve the options for recall.

  2. NIHR IBD BioResource: SNP imputation data

    • healthdatagateway.org
    unknown
    Updated Apr 12, 2021
    + more versions
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    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care." (2021). NIHR IBD BioResource: SNP imputation data [Dataset]. https://healthdatagateway.org/en/dataset/626
    Explore at:
    unknownAvailable download formats
    Dataset updated
    Apr 12, 2021
    Dataset provided by
    National Health Servicehttps://www.nhs.uk/
    National Institute for Health and Care Research
    Health Data Research Uk
    Department of Health and Social Carehttps://gov.uk/dhsc
    Authors
    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care."
    License

    https://bioresource.nihr.ac.uk/using-our-bioresourcehttps://bioresource.nihr.ac.uk/using-our-bioresource

    Description

    The NIHR IBD Bioresource comprises ~34k participants with Inflammatory Bowel Disease (IBD). SNP chip data can be used to impute many of the (non-rare) SNPs not included on the chips. The NIHR BioResource is using a modified version of the UK Biobank protocol to improve the options for recall.

  3. NIHR BioResource: SNP chip data

    • healthdatagateway.org
    unknown
    Updated Mar 31, 2021
    Share
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    TwitterTwitter
    Email
    Click to copy link
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    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care." (2021). NIHR BioResource: SNP chip data [Dataset]. https://healthdatagateway.org/en/dataset/391
    Explore at:
    unknownAvailable download formats
    Dataset updated
    Mar 31, 2021
    Dataset provided by
    National Health Servicehttps://www.nhs.uk/
    National Institute for Health and Care Research
    Health Data Research Uk
    Department of Health and Social Carehttps://gov.uk/dhsc
    Authors
    NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care."
    License

    https://bioresource.nihr.ac.uk/using-our-bioresourcehttps://bioresource.nihr.ac.uk/using-our-bioresource

    Description

    The NIHR Bioresource consists of several groups of participants: ~70k from the general population and blood donors (COMPARE, INTERVAL and STRIDES studies); ~19k with one of ~50 rare diseases (RD) including a ~5k pilot for GEL; ~30k with Inflammatory Bowel Disease (IBD) which include the members of Gut Reaction, the Health Data Research Hub for IBD; and ~20k with Anxiety or depression (GLAD study). It intends to extend recruitment in all areas, and to other rare and common disease groups, with a target of ~300k by 2022. The NIHR BioResource extracts DNA from blood and saliva samples taken at recruitment, and measures a panel of SNPs on each DNA sample, using a commodity SNP genotyping array from e.g. Illumina or Affymetrix (now Thermofisher). This is used to pre-screen or match participants when inviting them to take part in experimental medicine studies. De-identified versions of this data is available to researchers investigating the feasibility of future studies. The Technical Metadata describes a SNP annotation file – i.e. what the chip is measuring. The file itself has as many rows as there are SNPs represented on the chip, and is proprietary to the manufacturer, although deeply familiar to researchers.

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NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care." (2021). NIHR BioResource: SNP imputation data [Dataset]. https://healthdatagateway.org/en/dataset/389
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NIHR BioResource: SNP imputation data

NIHR BioResource: SNP imputation data

Explore at:
unknownAvailable download formats
Dataset updated
Mar 31, 2021
Dataset provided by
National Health Servicehttps://www.nhs.uk/
National Institute for Health and Care Research
Health Data Research Uk
Department of Health and Social Carehttps://gov.uk/dhsc
Authors
NIHR BioResource. Acknowledgement text: "We thank NIHR BioResource volunteers for their participation, and gratefully acknowledge NIHR BioResource centres, NHS Trusts and staff for their contribution. We thank the National Institute for Health Research, NHS Blood and Transplant, and Health Data Research UK as part of the Digital Innovation Hub Programme. The views expressed are those of the author(s) and not necessarily those of the NHS, the NIHR or the Department of Health and Social Care."
License

https://bioresource.nihr.ac.uk/using-our-bioresourcehttps://bioresource.nihr.ac.uk/using-our-bioresource

Description

The NIHR Bioresource consists of several groups of participants: ~70k from the general population and blood donors (COMPARE, INTERVAL and STRIDES studies); ~19k with one of ~50 rare diseases (RD) including a ~5k pilot for GEL; ~30k with Inflammatory Bowel Disease (IBD) which include the members of Gut Reaction, the Health Data Research Hub for IBD; and ~20k with Anxiety or depression (GLAD study). It intends to extend recruitment in all areas, and to other rare and common disease groups, with a target of ~300k by 2022. SNP chip data can be used to impute many of the (non-rare) SNPs not included on the chips. The NIHR BioResource is using a modified version of the UK Biobank protocol to improve the options for recall.

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