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zipfile contains 3 files:1. USA500_parsnp_out.fasta 562 S. aureus CC8 (mostly USA500) genomes aligned using the parsnp tool. The alignment length is 2361133 nt2. USA500CFML_ouput.importation_status.txt. Output of ClonalFrameML listing recombinant regions identified.3. CFML_edit_fasta.R an script that takes the input of 1) and 2) and creates an output multifasta file with recombinant regions removed.
Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
Prices for United States Stock Market Index (US500) including live quotes, historical charts and news. United States Stock Market Index (US500) was last updated by Trading Economics this July 11 of 2025.
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Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
zipfile contains 3 files:1. USA500_parsnp_out.fasta 562 S. aureus CC8 (mostly USA500) genomes aligned using the parsnp tool. The alignment length is 2361133 nt2. USA500CFML_ouput.importation_status.txt. Output of ClonalFrameML listing recombinant regions identified.3. CFML_edit_fasta.R an script that takes the input of 1) and 2) and creates an output multifasta file with recombinant regions removed.