3 datasets found
  1. d

    (HS 17) Automate Workflows using Jupyter notebook to create Large Spatial...

    • dataone.org
    • search.dataone.org
    Updated Dec 5, 2021
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    Young-Don Choi (2021). (HS 17) Automate Workflows using Jupyter notebook to create Large Spatial Sample Datasets [Dataset]. https://dataone.org/datasets/sha256%3Af26b01f01a977559f41e7bfdbeb02076951d667d717295ee7c495d54d0f4178f
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    Dataset updated
    Dec 5, 2021
    Dataset provided by
    Hydroshare
    Authors
    Young-Don Choi
    Description

    For the automated workflows, we create Jupyter notebooks for each state. In these workflows, GIS processing to merge, extract and project GeoTIFF data was the most important process. For this process, we used ArcPy which is a python package to perform geographic data analysis, data conversion, and data management in ArcGIS (Toms, 2015). After creating state-scale LSS datasets in GeoTIFF format, we convert GeoTIFF to NetCDF using xarray and rioxarray Python packages. Xarray is a Python package to work with multi-dimensional arrays and rioxarray is rasterio xarray extension. Rasterio is a Python library to read and write GeoTIFF and other raster formats. We used xarray to manipulate data type and add metadata in NetCDF file and rioxarray to save GeoTIFF to NetCDF format. Through these procedures, we created three composite HyddroShare resources to share state-scale LSS datasets. Due to the limitation of ArcGIS Pro license which is a commercial GIS software, we developed this Jupyter notebook on Windows OS.

  2. d

    (HS 2) Automate Workflows using Jupyter notebook to create Large Extent...

    • search.dataone.org
    • hydroshare.org
    Updated Oct 19, 2024
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    Young-Don Choi (2024). (HS 2) Automate Workflows using Jupyter notebook to create Large Extent Spatial Datasets [Dataset]. http://doi.org/10.4211/hs.a52df87347ef47c388d9633925cde9ad
    Explore at:
    Dataset updated
    Oct 19, 2024
    Dataset provided by
    Hydroshare
    Authors
    Young-Don Choi
    Description

    We implemented automated workflows using Jupyter notebooks for each state. The GIS processing, crucial for merging, extracting, and projecting GeoTIFF data, was performed using ArcPy—a Python package for geographic data analysis, conversion, and management within ArcGIS (Toms, 2015). After generating state-scale LES (large extent spatial) datasets in GeoTIFF format, we utilized the xarray and rioxarray Python packages to convert GeoTIFF to NetCDF. Xarray is a Python package to work with multi-dimensional arrays and rioxarray is rasterio xarray extension. Rasterio is a Python library to read and write GeoTIFF and other raster formats. Xarray facilitated data manipulation and metadata addition in the NetCDF file, while rioxarray was used to save GeoTIFF as NetCDF. These procedures resulted in the creation of three HydroShare resources (HS 3, HS 4 and HS 5) for sharing state-scale LES datasets. Notably, due to licensing constraints with ArcGIS Pro, a commercial GIS software, the Jupyter notebook development was undertaken on a Windows OS.

  3. d

    (HS 17) Automate Workflows using Jupyter notebook to create Large Extent...

    • search.dataone.org
    • dataone.org
    Updated Feb 3, 2024
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    Young-Don Choi (2024). (HS 17) Automate Workflows using Jupyter notebook to create Large Extent Spatial Datasets [Dataset]. https://search.dataone.org/view/sha256%3Ad35249b308e07c4086787658a7216fdf034ca70ec5cc6eb392fb969e14ecc530
    Explore at:
    Dataset updated
    Feb 3, 2024
    Dataset provided by
    Hydroshare
    Authors
    Young-Don Choi
    Description

    We implemented automated workflows using Jupyter notebooks for each state. The GIS processing, crucial for merging, extracting, and projecting GeoTIFF data, was performed using ArcPy—a Python package for geographic data analysis, conversion, and management within ArcGIS (Toms, 2015). After generating state-scale LES datasets in GeoTIFF format, we utilized the xarray and rioxarray Python packages to convert GeoTIFF to NetCDF. Xarray is a Python package to work with multi-dimensional arrays and rioxarray is rasterio xarray extension. Rasterio is a Python library to read and write GeoTIFF and other raster formats. Xarray facilitated data manipulation and metadata addition in the NetCDF file, while rioxarray was used to save GeoTIFF as NetCDF. These procedures resulted in the creation of three composite HydroShare resources (HS 2, HS 3 and HS 4) for sharing state-scale LES datasets. Notably, due to licensing constraints with ArcGIS Pro, a commercial GIS software, the Jupyter notebook development was undertaken on a Windows OS.

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Young-Don Choi (2021). (HS 17) Automate Workflows using Jupyter notebook to create Large Spatial Sample Datasets [Dataset]. https://dataone.org/datasets/sha256%3Af26b01f01a977559f41e7bfdbeb02076951d667d717295ee7c495d54d0f4178f

(HS 17) Automate Workflows using Jupyter notebook to create Large Spatial Sample Datasets

Explore at:
Dataset updated
Dec 5, 2021
Dataset provided by
Hydroshare
Authors
Young-Don Choi
Description

For the automated workflows, we create Jupyter notebooks for each state. In these workflows, GIS processing to merge, extract and project GeoTIFF data was the most important process. For this process, we used ArcPy which is a python package to perform geographic data analysis, data conversion, and data management in ArcGIS (Toms, 2015). After creating state-scale LSS datasets in GeoTIFF format, we convert GeoTIFF to NetCDF using xarray and rioxarray Python packages. Xarray is a Python package to work with multi-dimensional arrays and rioxarray is rasterio xarray extension. Rasterio is a Python library to read and write GeoTIFF and other raster formats. We used xarray to manipulate data type and add metadata in NetCDF file and rioxarray to save GeoTIFF to NetCDF format. Through these procedures, we created three composite HyddroShare resources to share state-scale LSS datasets. Due to the limitation of ArcGIS Pro license which is a commercial GIS software, we developed this Jupyter notebook on Windows OS.

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