2 datasets found
  1. D

    ARCHIVED: COVID-19 Testing by Geography Over Time

    • data.sfgov.org
    • healthdata.gov
    • +2more
    application/rdfxml +5
    Updated Jan 12, 2024
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    Department of Public Health (2024). ARCHIVED: COVID-19 Testing by Geography Over Time [Dataset]. https://data.sfgov.org/Health-and-Social-Services/ARCHIVED-COVID-19-Testing-by-Geography-Over-Time/qhc5-mubk
    Explore at:
    json, application/rdfxml, tsv, csv, application/rssxml, xmlAvailable download formats
    Dataset updated
    Jan 12, 2024
    Dataset authored and provided by
    Department of Public Health
    License

    ODC Public Domain Dedication and Licence (PDDL) v1.0http://www.opendatacommons.org/licenses/pddl/1.0/
    License information was derived automatically

    Description

    A. SUMMARY This dataset includes COVID-19 tests by resident neighborhood and specimen collection date (the day the test was collected). Specifically, this dataset includes tests of San Francisco residents who listed a San Francisco home address at the time of testing. These resident addresses were then geo-located and mapped to neighborhoods. The resident address associated with each test is hand-entered and susceptible to errors, therefore neighborhood data should be interpreted as an approximation, not a precise nor comprehensive total.

    In recent months, about 5% of tests are missing addresses and therefore cannot be included in any neighborhood totals. In earlier months, more tests were missing address data. Because of this high percentage of tests missing resident address data, this neighborhood testing data for March, April, and May should be interpreted with caution (see below)

    Percentage of tests missing address information, by month in 2020 Mar - 33.6% Apr - 25.9% May - 11.1% Jun - 7.2% Jul - 5.8% Aug - 5.4% Sep - 5.1% Oct (Oct 1-12) - 5.1%

    To protect the privacy of residents, the City does not disclose the number of tests in neighborhoods with resident populations of fewer than 1,000 people. These neighborhoods are omitted from the data (they include Golden Gate Park, John McLaren Park, and Lands End).

    Tests for residents that listed a Skilled Nursing Facility as their home address are not included in this neighborhood-level testing data. Skilled Nursing Facilities have required and repeated testing of residents, which would change neighborhood trends and not reflect the broader neighborhood's testing data.

    This data was de-duplicated by individual and date, so if a person gets tested multiple times on different dates, all tests will be included in this dataset (on the day each test was collected).

    The total number of positive test results is not equal to the total number of COVID-19 cases in San Francisco. During this investigation, some test results are found to be for persons living outside of San Francisco and some people in San Francisco may be tested multiple times (which is common). To see the number of new confirmed cases by neighborhood, reference this map: https://sf.gov/data/covid-19-case-maps#new-cases-maps

    B. HOW THE DATASET IS CREATED COVID-19 laboratory test data is based on electronic laboratory test reports. Deduplication, quality assurance measures and other data verification processes maximize accuracy of laboratory test information. All testing data is then geo-coded by resident address. Then data is aggregated by analysis neighborhood and specimen collection date.

    Data are prepared by close of business Monday through Saturday for public display.

    C. UPDATE PROCESS Updates automatically at 05:00 Pacific Time each day. Redundant runs are scheduled at 07:00 and 09:00 in case of pipeline failure.

    D. HOW TO USE THIS DATASET San Francisco population estimates for geographic regions can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS).

    Due to the high degree of variation in the time needed to complete tests by different labs there is a delay in this reporting. On March 24 the Health Officer ordered all labs in the City to report complete COVID-19 testing information to the local and state health departments.

    In order to track trends over time, a data user can analyze this data by "specimen_collection_date".

    Calculating Percent Positivity: The positivity rate is the percentage of tests that return a positive result for COVID-19 (positive tests divided by the sum of positive and negative tests). Indeterminate results, which could not conclusively determine whether COVID-19 virus was present, are not included in the calculation of percent positive. Percent positivity indicates how widespread COVID-19 is in San Francisco and it helps public health officials determine if we are testing enough given the number of people who are testing positive. When there are fewer than 20 positives tests for a given neighborhood and time period, the positivity rate is not calculated for the public tracker because rates of small test counts are less reliable.

    Calculating Testing Rates: To calculate the testing rate per 10,000 residents, divide the total number of tests collected (positive, negative, and indeterminate results) for neighborhood by the total number of residents who live in that neighborhood (included in the dataset), then multiply by 10,000. When there are fewer than 20 total tests for a given neighborhood and time period, the testing rate is not calculated for the public tracker because rates of small test counts are less reliable.

    Read more about how this data is updated and validated daily: https://sf.gov/information/covid-19-data-questions

    E. CHANGE LOG

    • 1/12/2024 - This dataset will stop updating as of 1/12/2024
    • 6/21/2023 - A small number of additional COVID-19 testing records were released as part of our ongoing cleaning efforts.
    • 1/31/2023 - updated “acs_population” column to reflect the 2020 Census Bureau American Community Survey (ACS) San Francisco Population estimates.
    • 1/31/2023 - implemented system updates to streamline and improve our geo-coded data, resulting in small shifts in our testing data by geography.
    • 1/31/2023 - renamed column “last_updated_at” to “data_as_of”.
    • 1/31/2023 - removed the “multipolygon” column. To access the multipolygon geometry column for each geography unit, refer to COVID-19 Cases and Deaths Summarized by Geography.
    • 4/16/2021 - dataset updated to refresh with a five-day data lag.

  2. A

    Covid-19 Testing by Geography and Date

    • data.amerigeoss.org
    csv, json, rdf, xml
    Updated Jul 27, 2022
    Share
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    United States (2022). Covid-19 Testing by Geography and Date [Dataset]. https://data.amerigeoss.org/dataset/covid-19-testing-by-geography-and-date
    Explore at:
    csv, json, xml, rdfAvailable download formats
    Dataset updated
    Jul 27, 2022
    Dataset provided by
    United States
    License

    ODC Public Domain Dedication and Licence (PDDL) v1.0http://www.opendatacommons.org/licenses/pddl/1.0/
    License information was derived automatically

    Description

    Note: As of April 16, 2021, this dataset will update daily with a five-day data lag.

    A. SUMMARY This dataset includes COVID-19 tests by resident neighborhood and specimen collection date (the day the test was collected). Specifically, this dataset includes tests of San Francisco residents who listed a San Francisco home address at the time of testing. These resident addresses were then geo-located and mapped to neighborhoods. The resident address associated with each test is hand-entered and susceptible to errors, therefore neighborhood data should be interpreted as an approximation, not a precise nor comprehensive total.

    In recent months, about 5% of tests are missing addresses and therefore cannot be included in any neighborhood totals. In earlier months, more tests were missing address data. Because of this high percentage of tests missing resident address data, this neighborhood testing data for March, April, and May should be interpreted with caution (see below)

    Percentage of tests missing address information, by month in 2020 Mar - 33.6% Apr - 25.9% May - 11.1% Jun - 7.2% Jul - 5.8% Aug - 5.4% Sep - 5.1% Oct (Oct 1-12) - 5.1%

    To protect the privacy of residents, the City does not disclose the number of tests in neighborhoods with resident populations of fewer than 1,000 people. These neighborhoods are omitted from the data (they include Golden Gate Park, John McLaren Park, and Lands End).

    Tests for residents that listed a Skilled Nursing Facility as their home address are not included in this neighborhood-level testing data. Skilled Nursing Facilities have required and repeated testing of residents, which would change neighborhood trends and not reflect the broader neighborhood's testing data.

    This data was de-duplicated by individual and date, so if a person gets tested multiple times on different dates, all tests will be included in this dataset (on the day each test was collected).

    The total number of positive test results is not equal to the total number of COVID-19 cases in San Francisco. During this investigation, some test results are found to be for persons living outside of San Francisco and some people in San Francisco may be tested multiple times (which is common). To see the number of new confirmed cases by neighborhood, reference this map: https://data.sfgov.org/stories/s/Map-of-Cumulative-Cases/adm5-wq8i#new-cases-map

    B. HOW THE DATASET IS CREATED COVID-19 laboratory test data is based on electronic laboratory test reports. Deduplication, quality assurance measures and other data verification processes maximize accuracy of laboratory test information. All testing data is then geo-coded by resident address. Then data is aggregated by "https://data.sfgov.org/Geographic-Locations-and-Boundaries/Analysis-Neighborhoods/p5b7-5n3h ">analysis neighborhood and specimen collection date.

    Data are prepared by close of business Monday through Saturday for public display.

    C. UPDATE PROCESS Updates automatically at 05:00 Pacific Time each day. Redundant runs are scheduled at 07:00 and 09:00 in case of pipeline failure.

    D. HOW TO USE THIS DATASET Due to the high degree of variation in the time needed to complete tests by different labs there is a delay in this reporting. On March 24 the Health Officer ordered all labs in the City to report complete COVID-19 testing information to the local and state health departments.

    In order to track trends over time, a data user can analyze this data by "specimen_collection_date".

    Calculating Percent Positivity: The positivity rate is the percentage of tests that return a positive result for COVID-19 (positive tests divided by the sum of positive and negative tests). Indeterminate results, which could not conclusively determine whether COVID-19 virus was present, are not included in the calculation of percent positive. Percent positivity indicates how widesprea

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Share
FacebookFacebook
TwitterTwitter
Email
Click to copy link
Link copied
Close
Cite
Department of Public Health (2024). ARCHIVED: COVID-19 Testing by Geography Over Time [Dataset]. https://data.sfgov.org/Health-and-Social-Services/ARCHIVED-COVID-19-Testing-by-Geography-Over-Time/qhc5-mubk

ARCHIVED: COVID-19 Testing by Geography Over Time

Explore at:
json, application/rdfxml, tsv, csv, application/rssxml, xmlAvailable download formats
Dataset updated
Jan 12, 2024
Dataset authored and provided by
Department of Public Health
License

ODC Public Domain Dedication and Licence (PDDL) v1.0http://www.opendatacommons.org/licenses/pddl/1.0/
License information was derived automatically

Description

A. SUMMARY This dataset includes COVID-19 tests by resident neighborhood and specimen collection date (the day the test was collected). Specifically, this dataset includes tests of San Francisco residents who listed a San Francisco home address at the time of testing. These resident addresses were then geo-located and mapped to neighborhoods. The resident address associated with each test is hand-entered and susceptible to errors, therefore neighborhood data should be interpreted as an approximation, not a precise nor comprehensive total.

In recent months, about 5% of tests are missing addresses and therefore cannot be included in any neighborhood totals. In earlier months, more tests were missing address data. Because of this high percentage of tests missing resident address data, this neighborhood testing data for March, April, and May should be interpreted with caution (see below)

Percentage of tests missing address information, by month in 2020 Mar - 33.6% Apr - 25.9% May - 11.1% Jun - 7.2% Jul - 5.8% Aug - 5.4% Sep - 5.1% Oct (Oct 1-12) - 5.1%

To protect the privacy of residents, the City does not disclose the number of tests in neighborhoods with resident populations of fewer than 1,000 people. These neighborhoods are omitted from the data (they include Golden Gate Park, John McLaren Park, and Lands End).

Tests for residents that listed a Skilled Nursing Facility as their home address are not included in this neighborhood-level testing data. Skilled Nursing Facilities have required and repeated testing of residents, which would change neighborhood trends and not reflect the broader neighborhood's testing data.

This data was de-duplicated by individual and date, so if a person gets tested multiple times on different dates, all tests will be included in this dataset (on the day each test was collected).

The total number of positive test results is not equal to the total number of COVID-19 cases in San Francisco. During this investigation, some test results are found to be for persons living outside of San Francisco and some people in San Francisco may be tested multiple times (which is common). To see the number of new confirmed cases by neighborhood, reference this map: https://sf.gov/data/covid-19-case-maps#new-cases-maps

B. HOW THE DATASET IS CREATED COVID-19 laboratory test data is based on electronic laboratory test reports. Deduplication, quality assurance measures and other data verification processes maximize accuracy of laboratory test information. All testing data is then geo-coded by resident address. Then data is aggregated by analysis neighborhood and specimen collection date.

Data are prepared by close of business Monday through Saturday for public display.

C. UPDATE PROCESS Updates automatically at 05:00 Pacific Time each day. Redundant runs are scheduled at 07:00 and 09:00 in case of pipeline failure.

D. HOW TO USE THIS DATASET San Francisco population estimates for geographic regions can be found in a view based on the San Francisco Population and Demographic Census dataset. These population estimates are from the 2016-2020 5-year American Community Survey (ACS).

Due to the high degree of variation in the time needed to complete tests by different labs there is a delay in this reporting. On March 24 the Health Officer ordered all labs in the City to report complete COVID-19 testing information to the local and state health departments.

In order to track trends over time, a data user can analyze this data by "specimen_collection_date".

Calculating Percent Positivity: The positivity rate is the percentage of tests that return a positive result for COVID-19 (positive tests divided by the sum of positive and negative tests). Indeterminate results, which could not conclusively determine whether COVID-19 virus was present, are not included in the calculation of percent positive. Percent positivity indicates how widespread COVID-19 is in San Francisco and it helps public health officials determine if we are testing enough given the number of people who are testing positive. When there are fewer than 20 positives tests for a given neighborhood and time period, the positivity rate is not calculated for the public tracker because rates of small test counts are less reliable.

Calculating Testing Rates: To calculate the testing rate per 10,000 residents, divide the total number of tests collected (positive, negative, and indeterminate results) for neighborhood by the total number of residents who live in that neighborhood (included in the dataset), then multiply by 10,000. When there are fewer than 20 total tests for a given neighborhood and time period, the testing rate is not calculated for the public tracker because rates of small test counts are less reliable.

Read more about how this data is updated and validated daily: https://sf.gov/information/covid-19-data-questions

E. CHANGE LOG

  • 1/12/2024 - This dataset will stop updating as of 1/12/2024
  • 6/21/2023 - A small number of additional COVID-19 testing records were released as part of our ongoing cleaning efforts.
  • 1/31/2023 - updated “acs_population” column to reflect the 2020 Census Bureau American Community Survey (ACS) San Francisco Population estimates.
  • 1/31/2023 - implemented system updates to streamline and improve our geo-coded data, resulting in small shifts in our testing data by geography.
  • 1/31/2023 - renamed column “last_updated_at” to “data_as_of”.
  • 1/31/2023 - removed the “multipolygon” column. To access the multipolygon geometry column for each geography unit, refer to COVID-19 Cases and Deaths Summarized by Geography.
  • 4/16/2021 - dataset updated to refresh with a five-day data lag.

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