Sample Graph Datasets in CSV Format
- zenodo.org
csvUpdated Dec 9, 2024
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EmailClick to copy linkLink copiedCiteEdwin Carreño; Edwin Carreño (2024). Sample Graph Datasets in CSV Format [Dataset]. http://doi.org/10.5281/zenodo.14330132csvAvailable download formatsUnique identifierhttps://doi.org/10.5281/zenodo.14330132Dataset updatedDec 9, 2024AuthorsEdwin Carreño; Edwin CarreñoLicenseAttribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automaticallyDescriptionSample Graph Datasets in CSV Format
Note: none of the data sets published here contain actual data, they are for testing purposes only.
Description
This data repository contains graph datasets, where each graph is represented by two CSV files: one for node information and another for edge details. To link the files to the same graph, their names include a common identifier based on the number of nodes. For example:
dataset_30_nodes_interactions.csv:contains 30 rows (nodes).dataset_30_edges_interactions.csv: contains 47 rows (edges).- the common identifier
dataset_30refers to the same graph.
CSV nodes
Each dataset contains the following columns:
Name of the Column Type Description UniProt ID string protein identification label string protein label (type of node) properties string a dictionary containing properties related to the protein. CSV edges
Each dataset contains the following columns:
Name of the Column Type Description Relationship ID string relationship identification Source ID string identification of the source protein in the relationship Target ID string identification of the target protein in the relationship label string relationship label (type of relationship) properties string a dictionary containing properties related to the relationship. Metadata
Graph Number of Nodes Number of Edges Sparse graph dataset_30*
30
47 Y
dataset_60*
60
181
Y
dataset_120*
120
689
Y
dataset_240*
240
2819
Y
dataset_300*
300
4658
Y
dataset_600*
600
18004
Y
dataset_1200*
1200
71785
Y
dataset_2400*
2400
288600
Y
dataset_3000*
3000
449727
Y
dataset_6000*
6000
1799413
Y
dataset_12000*
12000
7199863
Y
dataset_24000*
24000
28792361
Y
This repository include two (2) additional tiny graph datasets to experiment before dealing with larger datasets.
CSV nodes (tiny graphs)
Each dataset contains the following columns:
Name of the Column Type Description ID string node identification label string node label (type of node) properties string a dictionary containing properties related to the node. CSV edges (tiny graphs)
Each dataset contains the following columns:
Name of the Column Type Description ID string relationship identification source string identification of the source node in the relationship target string identification of the target node in the relationship label string relationship label (type of relationship) properties string a dictionary containing properties related to the relationship. Metadata (tiny graphs)
Graph Number of Nodes Number of Edges Sparse graph dataset_dummy* 3 6 N dataset_dummy2* 3 6 N Sample Graph Datasets in CSV Format
- zenodo.org
csvUpdated Dec 9, 2024ShareFacebookTwitterEmailClick to copy linkLink copiedCiteEdwin Carreño; Edwin Carreño (2024). Sample Graph Datasets in CSV Format [Dataset]. http://doi.org/10.5281/zenodo.14335015csvAvailable download formatsUnique identifierhttps://doi.org/10.5281/zenodo.14335015Dataset updatedDec 9, 2024AuthorsEdwin Carreño; Edwin CarreñoLicenseAttribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automaticallyDescriptionSample Graph Datasets in CSV Format
Note: none of the data sets published here contain actual data, they are for testing purposes only.
Description
This data repository contains graph datasets, where each graph is represented by two CSV files: one for node information and another for edge details. To link the files to the same graph, their names include a common identifier based on the number of nodes. For example:
dataset_30_nodes_interactions.csv:contains 30 rows (nodes).dataset_30_edges_interactions.csv: contains 47 rows (edges).- the common identifier
dataset_30refers to the same graph.
CSV nodes
Each dataset contains the following columns:
Name of the Column Type Description UniProt ID string protein identification label string protein label (type of node) properties string a dictionary containing properties related to the protein. CSV edges
Each dataset contains the following columns:
Name of the Column Type Description Relationship ID string relationship identification Source ID string identification of the source protein in the relationship Target ID string identification of the target protein in the relationship label string relationship label (type of relationship) properties string a dictionary containing properties related to the relationship. Metadata
Graph Number of Nodes Number of Edges Sparse graph dataset_30*
30
47 Y
dataset_60*
60
181
Y
dataset_120*
120
689
Y
dataset_240*
240
2819
Y
dataset_300*
300
4658
Y
dataset_600*
600
18004
Y
dataset_1200*
1200
71785
Y
dataset_2400*
2400
288600
Y
dataset_3000*
3000
449727
Y
dataset_6000*
6000
1799413
Y
dataset_12000*
12000
7199863
Y
dataset_24000*
24000
28792361
Y
dataset_30000*
30000
44991744
Y
This repository include two (2) additional tiny graph datasets to experiment before dealing with larger datasets.
CSV nodes (tiny graphs)
Each dataset contains the following columns:
Name of the Column Type Description ID string node identification label string node label (type of node) properties string a dictionary containing properties related to the node. CSV edges (tiny graphs)
Each dataset contains the following columns:
Name of the Column Type Description ID string relationship identification source string identification of the source node in the relationship target string identification of the target node in the relationship label string relationship label (type of relationship) properties string a dictionary containing properties related to the relationship. Metadata (tiny graphs)
Graph Number of Nodes Number of Edges Sparse graph dataset_dummy* 3 6 N dataset_dummy2* 3 6 N 
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FacebookTwitterEmailAttribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically
Sample Graph Datasets in CSV Format
Note: none of the data sets published here contain actual data, they are for testing purposes only.
Description
This data repository contains graph datasets, where each graph is represented by two CSV files: one for node information and another for edge details. To link the files to the same graph, their names include a common identifier based on the number of nodes. For example:
dataset_30_nodes_interactions.csv:contains 30 rows (nodes).dataset_30_edges_interactions.csv: contains 47 rows (edges).- the common identifier
dataset_30refers to the same graph.
CSV nodes
Each dataset contains the following columns:
| Name of the Column | Type | Description |
| UniProt ID | string | protein identification |
| label | string | protein label (type of node) |
| properties | string | a dictionary containing properties related to the protein. |
CSV edges
Each dataset contains the following columns:
| Name of the Column | Type | Description |
| Relationship ID | string | relationship identification |
| Source ID | string | identification of the source protein in the relationship |
| Target ID | string | identification of the target protein in the relationship |
| label | string | relationship label (type of relationship) |
| properties | string | a dictionary containing properties related to the relationship. |
Metadata
| Graph | Number of Nodes | Number of Edges | Sparse graph |
|
dataset_30* |
30 | 47 |
Y |
|
dataset_60* |
60 |
181 |
Y |
|
dataset_120* |
120 |
689 |
Y |
|
dataset_240* |
240 |
2819 |
Y |
|
dataset_300* |
300 |
4658 |
Y |
|
dataset_600* |
600 |
18004 |
Y |
|
dataset_1200* |
1200 |
71785 |
Y |
|
dataset_2400* |
2400 |
288600 |
Y |
|
dataset_3000* |
3000 |
449727 |
Y |
|
dataset_6000* |
6000 |
1799413 |
Y |
|
dataset_12000* |
12000 |
7199863 |
Y |
|
dataset_24000* |
24000 |
28792361 |
Y |
This repository include two (2) additional tiny graph datasets to experiment before dealing with larger datasets.
CSV nodes (tiny graphs)
Each dataset contains the following columns:
| Name of the Column | Type | Description |
| ID | string | node identification |
| label | string | node label (type of node) |
| properties | string | a dictionary containing properties related to the node. |
CSV edges (tiny graphs)
Each dataset contains the following columns:
| Name of the Column | Type | Description |
| ID | string | relationship identification |
| source | string | identification of the source node in the relationship |
| target | string | identification of the target node in the relationship |
| label | string | relationship label (type of relationship) |
| properties | string | a dictionary containing properties related to the relationship. |
Metadata (tiny graphs)
| Graph | Number of Nodes | Number of Edges | Sparse graph |
| dataset_dummy* | 3 | 6 | N |
| dataset_dummy2* | 3 | 6 | N |