2 datasets found
  1. The Midnight Scan Club (MSC) dataset

    • openneuro.org
    Updated Nov 25, 2019
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    Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach (2019). The Midnight Scan Club (MSC) dataset [Dataset]. http://doi.org/10.18112/openneuro.ds000224.v1.0.1
    Explore at:
    Dataset updated
    Nov 25, 2019
    Dataset provided by
    OpenNeurohttps://openneuro.org/
    Authors
    Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    This dataset contains the Midnight Scanning Club (MSC) data, a dataset focused on the precise characterization of ten individual subjects via collection of large amounts of per-individual data. Each subject underwent twelve separate two-hour scanning sessions. In the first two sessions we collected four T1 images, four T2 images, four MR angiograms, and eight MR venograms. In the last ten sessions we collected five hours of resting-state fMRI data and over five and a half hours of task fMRI data across three different tasks. Participants also underwent extensive neuropsychological testing. These raw data are all provided here.

    In addition to the raw data, we also provide several derivatives processed using both a volumetric (Talaraich-space) and a surface-based (fs_LR_32k space) pipeline. Volumetric derivatives include cross-session-average T1 and T2 images linearly registered to atlas (Talaraich) space; as well as resting-state data from each scanning session that has been fully preprocessed, motion-censored, and confound-regressed. Surface pipeline derivatives include cortical surfaces which were segmented from the T1 scans using freesurfer, hand-edited, and registered to fs_LR atlas space; resting-state data from each scanning session that has been fully preprocessed, motion-censored, and confound-regressed in CIFTI format (cortical: fs_LR32k; subcortical: Talaraich); cortical parcellations estimated from the resting-state data; vertex-wise whole-brain networks estimated from the resting-state data; task timecourses in CIFTI (cortical: fs_LR32k; subcortical: Talaraich) space; a selection of task contrast images in CIFTI (cortical: fs_LR32k; subcortical: Talaraich) space; myelin maps estimated from the T1- and T2-weighted anatomical scans; and matrices describing the physical geodesic/euclidean distances between every two points in the cifti image.

    Details of this dataset are more fully described in Gordon EM, Laumann TO, Gilmore AW, Newbold DJ, Greene DJ, Berg JJ, Ortega M, Hoyt-Drazen C, Gratton C, Sun H, et al. (2017). Precision Functional Mapping of Individual Human Brains. Neuron 95, 791–807. This manuscript should be cited when publishing work using this data.

  2. The Midnight Scan Club (MSC) dataset

    • openneuro.org
    Updated Jul 17, 2018
    Share
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    Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach (2018). The Midnight Scan Club (MSC) dataset [Dataset]. https://openneuro.org/datasets/ds000224/versions/00001
    Explore at:
    Dataset updated
    Jul 17, 2018
    Dataset provided by
    OpenNeurohttps://openneuro.org/
    Authors
    Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    This dataset contains the Midnight Scanning Club (MSC) data, a dataset focused on the precise characterization of ten individual subjects via collection of large amounts of per-individual data. Each subject underwent twelve separate two-hour scanning sessions. In the first two sessions we collected four T1 images, four T2 images, four MR angiograms, and eight MR venograms. In the last ten sessions we collected five hours of resting-state fMRI data and over five and a half hours of task fMRI data across three different tasks. Participants also underwent extensive neuropsychological testing. These raw data are all provided here.

    In addition to the raw data, we also provide several processed derivatives. These include cross-session-average T1 and T2 images linearly registered to atlas (Talaraich) space; cortical surfaces which were segmented from the T1 scans using freesurfer, hand-edited, and registered to fs_LR atlas space; resting-state data from each scanning session which has been fully preprocessed, motion-censored, and confound-regressed, provided both in volumetric (Talaraich) space and CIFTI (cortical: fs_LR32k; subcortical: Talaraich) space; cortical parcellations estimated from the resting-state data; vertex-wise whole-brain networks estimated from the resting-state data; myelin maps estimated from the T1- and T2-weighted anatomical scans; and matrices describing the physical geodesic/euclidean distances between every two points in the brain. Derivatives of the task data can be found at Neurovault.org.

    Details of this dataset are more fully described in Gordon EM, Laumann TO, Gilmore AW, Newbold DJ, Greene DJ, Berg JJ, Ortega M, Hoyt-Drazen C, Gratton C, Sun H, et al. (2017). Precision Functional Mapping of Individual Human Brains. Neuron 95, 791–807. This manuscript should be cited when publishing work using this data.

    Comments added by Openfmri Curators

    ===========================================

    General Comments

    Defacing

    Defacing was performed by the submitter.

    Quality Control

    Mriqc was run on the dataset. Results are located in derivatives/mriqc. Learn more about it here: https://mriqc.readthedocs.io/en/latest/

    Where to discuss the dataset

    1) www.openfmri.org/dataset/ds000224/ See the comments section at the bottom of the dataset page. 2) www.neurostars.org Please tag any discussion topics with the tags openfmri and ds000224. 3) Send an email to submissions@openfmri.org. Please include the accession number in your email.

    Known Issues

    sub-MSC06_ses-func08_task-rest_bold.nii.gz has 817 volumes whereas all other *task-rest_bold.nii.gz files have 818 volumes

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Click to copy link
Link copied
Close
Cite
Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach (2019). The Midnight Scan Club (MSC) dataset [Dataset]. http://doi.org/10.18112/openneuro.ds000224.v1.0.1
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The Midnight Scan Club (MSC) dataset

Explore at:
93 scholarly articles cite this dataset (View in Google Scholar)
Dataset updated
Nov 25, 2019
Dataset provided by
OpenNeurohttps://openneuro.org/
Authors
Evan M. Gordon; Timothy O. Laumann; Adrian W. Gilmore; Dillan J. Newbold; Deanna J. Greene; Jeffrey J. Berg; Mario Ortega; Catherine Hoyt-Drazen; Caterina Gratton; Haoxin Sun; Jacqueline M. Hampton; Rebecca S. Coalson; Annie Nguyen; Kathleen B. McDermott; Joshua S. Shimony; Abraham Z. Snyder; Bradley L. Schlaggar; Steven E. Petersen; Steven M. Nelson; Nico U.F. Dosenbach
License

CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
License information was derived automatically

Description

This dataset contains the Midnight Scanning Club (MSC) data, a dataset focused on the precise characterization of ten individual subjects via collection of large amounts of per-individual data. Each subject underwent twelve separate two-hour scanning sessions. In the first two sessions we collected four T1 images, four T2 images, four MR angiograms, and eight MR venograms. In the last ten sessions we collected five hours of resting-state fMRI data and over five and a half hours of task fMRI data across three different tasks. Participants also underwent extensive neuropsychological testing. These raw data are all provided here.

In addition to the raw data, we also provide several derivatives processed using both a volumetric (Talaraich-space) and a surface-based (fs_LR_32k space) pipeline. Volumetric derivatives include cross-session-average T1 and T2 images linearly registered to atlas (Talaraich) space; as well as resting-state data from each scanning session that has been fully preprocessed, motion-censored, and confound-regressed. Surface pipeline derivatives include cortical surfaces which were segmented from the T1 scans using freesurfer, hand-edited, and registered to fs_LR atlas space; resting-state data from each scanning session that has been fully preprocessed, motion-censored, and confound-regressed in CIFTI format (cortical: fs_LR32k; subcortical: Talaraich); cortical parcellations estimated from the resting-state data; vertex-wise whole-brain networks estimated from the resting-state data; task timecourses in CIFTI (cortical: fs_LR32k; subcortical: Talaraich) space; a selection of task contrast images in CIFTI (cortical: fs_LR32k; subcortical: Talaraich) space; myelin maps estimated from the T1- and T2-weighted anatomical scans; and matrices describing the physical geodesic/euclidean distances between every two points in the cifti image.

Details of this dataset are more fully described in Gordon EM, Laumann TO, Gilmore AW, Newbold DJ, Greene DJ, Berg JJ, Ortega M, Hoyt-Drazen C, Gratton C, Sun H, et al. (2017). Precision Functional Mapping of Individual Human Brains. Neuron 95, 791–807. This manuscript should be cited when publishing work using this data.

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