76 datasets found
  1. Hybrid gridded demographic data for the world, 1950-2020

    • zenodo.org
    • explore.openaire.eu
    • +1more
    nc
    Updated Apr 27, 2020
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    Jonathan Chambers; Jonathan Chambers (2020). Hybrid gridded demographic data for the world, 1950-2020 [Dataset]. http://doi.org/10.5281/zenodo.3768003
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    ncAvailable download formats
    Dataset updated
    Apr 27, 2020
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Jonathan Chambers; Jonathan Chambers
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Area covered
    World
    Description

    This is a hybrid gridded dataset of demographic data for the world, given as 5-year population bands at a 0.5 degree grid resolution.

    This dataset combines the NASA SEDAC Gridded Population of the World version 4 (GPWv4) with the ISIMIP Histsoc gridded population data and the United Nations World Population Program (WPP) demographic modelling data.

    Demographic fractions are given for the time period covered by the UN WPP model (1950-2050) while demographic totals are given for the time period covered by the combination of GPWv4 and Histsoc (1950-2020)

    Method - demographic fractions

    Demographic breakdown of country population by grid cell is calculated by combining the GPWv4 demographic data given for 2010 with the yearly country breakdowns from the UN WPP. This combines the spatial distribution of demographics from GPWv4 with the temporal trends from the UN WPP. This makes it possible to calculate exposure trends from 1980 to the present day.

    To combine the UN WPP demographics with the GPWv4 demographics, we calculate for each country the proportional change in fraction of demographic in each age band relative to 2010 as:

    \(\delta_{year,\ country,age}^{\text{wpp}} = f_{year,\ country,age}^{\text{wpp}}/f_{2010,country,age}^{\text{wpp}}\)

    Where:

    - \(\delta_{year,\ country,age}^{\text{wpp}}\) is the ratio of change in demographic for a given age and and country from the UN WPP dataset.

    - \(f_{year,\ country,age}^{\text{wpp}}\) is the fraction of population in the UN WPP dataset for a given age band, country, and year.

    - \(f_{2010,country,age}^{\text{wpp}}\) is the fraction of population in the UN WPP dataset for a given age band, country for the year 2020.

    The gridded demographic fraction is then calculated relative to the 2010 demographic data given by GPWv4.

    For each subset of cells corresponding to a given country c, the fraction of population in a given age band is calculated as:

    \(f_{year,c,age}^{\text{gpw}} = \delta_{year,\ country,age}^{\text{wpp}}*f_{2010,c,\text{age}}^{\text{gpw}}\)

    Where:

    - \(f_{year,c,age}^{\text{gpw}}\) is the fraction of the population in a given age band for given year, for the grid cell c.

    - \(f_{2010,c,age}^{\text{gpw}}\) is the fraction of the population in a given age band for 2010, for the grid cell c.

    The matching between grid cells and country codes is performed using the GPWv4 gridded country code lookup data and country name lookup table. The final dataset is assembled by combining the cells from all countries into a single gridded time series. This time series covers the whole period from 1950-2050, corresponding to the data available in the UN WPP model.

    Method - demographic totals

    Total population data from 1950 to 1999 is drawn from ISIMIP Histsoc, while data from 2000-2020 is drawn from GPWv4. These two gridded time series are simply joined at the cut-over date to give a single dataset covering 1950-2020.

    The total population per age band per cell is calculated by multiplying the population fractions by the population totals per grid cell.

    Note that as the total population data only covers until 2020, the time span covered by the demographic population totals data is 1950-2020 (not 1950-2050).

    Disclaimer

    This dataset is a hybrid of different datasets with independent methodologies. No guarantees are made about the spatial or temporal consistency across dataset boundaries. The dataset may contain outlier points (e.g single cells with demographic fractions >1). This dataset is produced on a 'best effort' basis and has been found to be broadly consistent with other approaches, but may contain inconsistencies which not been identified.

  2. o

    School information and student demographics

    • data.ontario.ca
    • datasets.ai
    • +1more
    xlsx
    Updated Jul 8, 2025
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    Education (2025). School information and student demographics [Dataset]. https://data.ontario.ca/dataset/school-information-and-student-demographics
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    xlsx(1565910), xlsx(1550796), xlsx(1566878), xlsx(1565304), xlsx(1562805), xlsx(1459001), xlsx(1462006), xlsx(1460629), xlsx(1500842), xlsx(1482917), xlsx(1547704), xlsx(1567330), xlsx(1580734), xlsx(1462064)Available download formats
    Dataset updated
    Jul 8, 2025
    Dataset authored and provided by
    Education
    License

    https://www.ontario.ca/page/open-government-licence-ontariohttps://www.ontario.ca/page/open-government-licence-ontario

    Time period covered
    Jun 6, 2025
    Area covered
    Ontario
    Description

    Data includes: board and school information, grade 3 and 6 EQAO student achievements for reading, writing and mathematics, and grade 9 mathematics EQAO and OSSLT. Data excludes private schools, Education and Community Partnership Programs (ECPP), summer, night and continuing education schools.

    How Are We Protecting Privacy?

    Results for OnSIS and Statistics Canada variables are suppressed based on school population size to better protect student privacy. In order to achieve this additional level of protection, the Ministry has used a methodology that randomly rounds a percentage either up or down depending on school enrolment. In order to protect privacy, the ministry does not publicly report on data when there are fewer than 10 individuals represented.

      * Percentages depicted as 0 may not always be 0 values as in certain situations the values have been randomly rounded down or there are no reported results at a school for the respective indicator. * Percentages depicted as 100 are not always 100, in certain situations the values have been randomly rounded up.
    The school enrolment totals have been rounded to the nearest 5 in order to better protect and maintain student privacy.

    The information in the School Information Finder is the most current available to the Ministry of Education at this time, as reported by schools, school boards, EQAO and Statistics Canada. The information is updated as frequently as possible.

    This information is also available on the Ministry of Education's School Information Finder website by individual school.

    Descriptions for some of the data types can be found in our glossary.

    School/school board and school authority contact information are updated and maintained by school boards and may not be the most current version. For the most recent information please visit: https://data.ontario.ca/dataset/ontario-public-school-contact-information.

  3. c

    Projections of the Population of States by Age, Sex, and Race: 1988-2010

    • archive.ciser.cornell.edu
    Updated Feb 16, 2020
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    Bureau of the Census (2020). Projections of the Population of States by Age, Sex, and Race: 1988-2010 [Dataset]. http://doi.org/10.6077/ygnx-yh91
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    Dataset updated
    Feb 16, 2020
    Dataset authored and provided by
    Bureau of the Census
    Variables measured
    GeographicUnit
    Description

    This dataset provides annual population projections for the 50 states and the District of Columbia by age, sex, and race for the years 1986 through 2010. The projections were made using a mathematical projection model called the cohort-component method. This method allows separate assumptions to be made for each of the components of population change: births, deaths, internal migration, and international migration. The projections are consistent with the July 1, 1986 population estimates for states. In general, the projections assume a slight increase in the national levels of fertility, an increasing level of life expectancy, and a decreasing level of net international migration. Internal migration assumptions are based on the annual state-to-state migration data for the years 1975-1986. (Source: downloaded from ICPSR 7/13/10)

    Please Note: This dataset is part of the historical CISER Data Archive Collection and is also available at ICPSR at https://doi.org/10.3886/ICPSR09270.v1. We highly recommend using the ICPSR version as they may make this dataset available in multiple data formats in the future.

  4. H

    Replication Data for: "Catastrophe risk in a stochastic multi-population...

    • dataverse.harvard.edu
    Updated Mar 29, 2024
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    Jens Robben; Katrien Antonio (2024). Replication Data for: "Catastrophe risk in a stochastic multi-population mortality model" [Dataset]. http://doi.org/10.7910/DVN/RCED3C
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    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Mar 29, 2024
    Dataset provided by
    Harvard Dataverse
    Authors
    Jens Robben; Katrien Antonio
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    The code in this replication package contains the data and code used for the implementation and analysis of the case study presented in the paper "Catastrophe risk in a stochastic multi-population mortality model". The data sets used in this paper are publicly available from the Human Mortality Database and Eurostat. The code is written in R and can be accessed and downloaded for further reference and replication of the obtained results.

  5. d

    Replication Data for \"SimuBP: A Simulator of Population Dynamics and...

    • search.dataone.org
    Updated Nov 8, 2023
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    Wu, Xiaowei (2023). Replication Data for \"SimuBP: A Simulator of Population Dynamics and Mutations based on Branching Processes\" [Dataset]. http://doi.org/10.7910/DVN/Q4IQRH
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    Dataset updated
    Nov 8, 2023
    Dataset provided by
    Harvard Dataverse
    Authors
    Wu, Xiaowei
    Description

    This dataset contains the following ".PDF", ".R", and ".RData" files: (1) A PDF file "Description of the SimuBP function.PDF"; (2) R scripts for Algorithm 1 (SimuBP), Algorithm 2, and Algorithm 3; (3) R scripts for Simulations S1a, S1b, S1c, S2a, S2b, S2c, and S3a; (4) An R script "pLD.R" used in Simulation S1c. (5) Results generated in Simulations S1a, S1b, S1c, S2a, S2b, and S3a.

  6. Hybrid gridded demographic data for China, 1979-2100

    • zenodo.org
    • explore.openaire.eu
    nc
    Updated Feb 23, 2021
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    Zhao Liu; Zhao Liu; Si Gao; Yidan Chen; Wenjia Cai; Wenjia Cai; Si Gao; Yidan Chen (2021). Hybrid gridded demographic data for China, 1979-2100 [Dataset]. http://doi.org/10.5281/zenodo.4554571
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    ncAvailable download formats
    Dataset updated
    Feb 23, 2021
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Zhao Liu; Zhao Liu; Si Gao; Yidan Chen; Wenjia Cai; Wenjia Cai; Si Gao; Yidan Chen
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Area covered
    China
    Description

    This is a hybrid gridded dataset of demographic data for China from 1979 to 2100, given as 21 five-year age groups of population divided by gender every year at a 0.5-degree grid resolution.

    The historical period (1979-2020) part of this dataset combines the NASA SEDAC Gridded Population of the World version 4 (GPWv4, UN WPP-Adjusted Population Count) with gridded population from the Inter-Sectoral Impact Model Intercomparison Project (ISIMIP, Histsoc gridded population data).

    The projection (2010-2100) part of this dataset is resampled directly from Chen et al.’s data published in Scientific Data.

    This dataset includes 31 provincial administrative districts of China, including 22 provinces, 5 autonomous regions, and 4 municipalities directly under the control of the central government (Taiwan, Hong Kong, and Macao were excluded due to missing data).

    Method - demographic fractions by age and gender in 1979-2020

    Age- and gender-specific demographic data by grid cell for each province in China are derived by combining historical demographic data in 1979-2020 with the national population census data provided by the National Statistics Bureau of China.

    To combine the national population census data with the historical demographics, we constructed the provincial fractions of demographic in each age groups and each gender according to the fourth, fifth and sixth national population census, which cover the year of 1979-1990, 1991-2000 and 2001-2020, respectively. The provincial fractions can be computed as:

    \(\begin{align*} \begin{split} f_{year,province,age,gender}= \left \{ \begin{array}{lr} POP_{1990,province,age,gender}^{4^{th}census}/POP_{1990,province}^{4^{th}census} & 1979\le\mathrm{year}\le1990\\ POP_{2000,province,age,gender}^{5^{th}census}/POP_{2000,province}^{5^{th}census} & 1991\le\mathrm{year}\le2000\\ POP_{2010,province,age,gender}^{6^{th}census}/POP_{2010,province}^{6^{th}census}, & 2001\le\mathrm{year}\le2020 \end{array} \right. \end{split} \end{align*}\)

    Where:

    - \( f_{\mathrm{year,province,age,gender}}\)is the fraction of population for a given age, a given gender in each province from the national census from 1979-2020.

    - \(\mathrm{PO}\mathrm{P}_{\mathrm{year,province,age,gender}}^{X^{\mathrm{th}}\mathrm{census} }\) is the total population for a given age, a given gender in each province from the Xth national census.

    - \(\mathrm{PO}\mathrm{P}_{\mathrm{year,province}}^{X^{\mathrm{th}}\mathrm{census} }\) is the total population for all ages and both genders in each province from the Xth national census.

    Method - demographic totals by age and gender in 1979-2020

    The yearly grid population for 1979-1999 are from ISIMIP Histsoc gridded population data, and for 2000-2020 are from the GPWv4 demographic data adjusted by the UN WPP (UN WPP-Adjusted Population Count, v4.11, https://beta.sedac.ciesin.columbia.edu/data/set/gpw-v4-population-count-adjusted-to-2015-unwpp-country-totals-rev11), which combines the spatial distribution of demographics from GPWv4 with the temporal trends from the UN WPP to improve accuracy. These two gridded time series are simply joined at the cut-over date to give a single dataset - historical demographic data covering 1979-2020.

    Next, historical demographic data are mapped onto the grid scale to obtain provincial data by using gridded provincial code lookup data and name lookup table. The age- and gender-specific fraction were multiplied by the historical demographic data at the provincial level to obtain the total population by age and gender for per grid cell for china in 1979-2020.

    Method - demographic totals and fractions by age and gender in 2010-2100

    The grid population count data in 2010-2100 under different shared socioeconomic pathway (SSP) scenarios are drawn from Chen et al. published in Scientific Data with a resolution of 1km (~ 0.008333 degree). We resampled the data to 0.5 degree by aggregating the population count together to obtain the future population data per cell.

    This previously published dataset also provided age- and gender-specific population of each provinces, so we calculated the fraction of each age and gender group at provincial level. Then, we multiply the fractions with grid population count to get the total population per age group per cell for each gender.

    Note that the projected population data from Chen’s dataset covers 2010-2020, while the historical population in our dataset also covers 2010-2020. The two datasets of that same period may vary because the original population data come from different sources and are calculated based on different methods.

    Disclaimer

    This dataset is a hybrid of different datasets with independent methodologies. Spatial or temporal consistency across dataset boundaries cannot be guaranteed.

  7. d

    2020 - 2021 Diversity Report

    • catalog.data.gov
    • data.cityofnewyork.us
    • +1more
    Updated Nov 29, 2024
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    data.cityofnewyork.us (2024). 2020 - 2021 Diversity Report [Dataset]. https://catalog.data.gov/dataset/2020-2021-diversity-report
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    Dataset updated
    Nov 29, 2024
    Dataset provided by
    data.cityofnewyork.us
    Description

    Report on Demographic Data in New York City Public Schools, 2020-21Enrollment counts are based on the November 13 Audited Register for 2020. Categories with total enrollment values of zero were omitted. Pre-K data includes students in 3-K. Data on students with disabilities, English language learners, and student poverty status are as of March 19, 2021. Due to missing demographic information in rare cases and suppression rules, demographic categories do not always add up to total enrollment and/or citywide totals. NYC DOE "Eligible for free or reduced-price lunch” counts are based on the number of students with families who have qualified for free or reduced-price lunch or are eligible for Human Resources Administration (HRA) benefits. English Language Arts and Math state assessment results for students in grade 9 are not available for inclusion in this report, as the spring 2020 exams did not take place. Spring 2021 ELA and Math test results are not included in this report for K-8 students in 2020-21. Due to the COVID-19 pandemic’s complete transformation of New York City’s school system during the 2020-21 school year, and in accordance with New York State guidance, the 2021 ELA and Math assessments were optional for students to take. As a result, 21.6% of students in grades 3-8 took the English assessment in 2021 and 20.5% of students in grades 3-8 took the Math assessment. These participation rates are not representative of New York City students and schools and are not comparable to prior years, so results are not included in this report. Dual Language enrollment includes English Language Learners and non-English Language Learners. Dual Language data are based on data from STARS; as a result, school participation and student enrollment in Dual Language programs may differ from the data in this report. STARS course scheduling and grade management software applications provide a dynamic internal data system for school use; while standard course codes exist, data are not always consistent from school to school. This report does not include enrollment at District 75 & 79 programs. Students enrolled at Young Adult Borough Centers are represented in the 9-12 District data but not the 9-12 School data. “Prior Year” data included in Comparison tabs refers to data from 2019-20. “Year-to-Year Change” data included in Comparison tabs indicates whether the demographics of a school or special program have grown more or less similar to its district or attendance zone (or school, for special programs) since 2019-20. Year-to-year changes must have been at least 1 percentage point to qualify as “More Similar” or “Less Similar”; changes less than 1 percentage point are categorized as “No Change”. The admissions method tab contains information on the admissions methods used for elementary, middle, and high school programs during the Fall 2020 admissions process. Fall 2020 selection criteria are included for all programs with academic screens, including middle and high school programs. Selection criteria data is based on school-reported information. Fall 2020 Diversity in Admissions priorities is included for applicable middle and high school programs. Note that the data on each school’s demographics and performance includes all students of the given subgroup who were enrolled in the school on November 13, 2020. Some of these students may not have been admitted under the admissions method(s) shown, as some students may have enrolled in the school outside the centralized admissions process (via waitlist, over-the-counter, or transfer), and schools may have changed admissions methods over the past few years. Admissions methods are only reported for grades K-12. "3K and Pre-Kindergarten data are reported at the site level. See below for definitions of site types included in this report. Additionally, please note that this report excludes all students at District 75 sites, reflecting slightly lower enrollment than our total of 60,265 students

  8. g

    Population recovery probabilities using a 5-stage-structured mathematical...

    • data.griidc.org
    • search.dataone.org
    Updated Jul 31, 2017
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    Azmy S. Ackleh (2017). Population recovery probabilities using a 5-stage-structured mathematical model and demographic stochasticity [Dataset]. http://doi.org/10.7266/N7TT4P1C
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    Dataset updated
    Jul 31, 2017
    Dataset provided by
    GRIIDC
    Authors
    Azmy S. Ackleh
    License

    CC0 1.0 Universal Public Domain Dedicationhttps://creativecommons.org/publicdomain/zero/1.0/
    License information was derived automatically

    Description

    A 5-stage-structured mathematical model (UDI: R4.x261.232:0001) was used to examine the recovery probabilities of a population after a time-varying environmental disaster. As a test case, stage-specific survival and transition rates, and annual fecundity values for the Gulf of Mexico sperm whales were used to model the lethal (reduction in survival rate) and sub-lethal (reduction in fecundity rates) impacts on population survival given demographic stochasticity. This analysis allows for the examination of the relationship between the DWH oil spill and the probability of population recovery to pre-disaster or biologically relevant levels under two conditions: probability of recovery in 10 years or 20 years post-disaster.

  9. H

    Replication Data (A) for 'Biased Programmers or Biased Data?': Individual...

    • dataverse.harvard.edu
    Updated Sep 2, 2020
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    Bo Cowgill; Fabrizio Dell'Acqua; Sam Deng; Daniel Hsu; Nakul Verma; Augustin Chaintreau (2020). Replication Data (A) for 'Biased Programmers or Biased Data?': Individual Measures of Numeracy, Literacy and Problem Solving Skill -- and Biographical Data -- for a Representative Sample of 200K OECD Residents [Dataset]. http://doi.org/10.7910/DVN/JAJ3CP
    Explore at:
    CroissantCroissant is a format for machine-learning datasets. Learn more about this at mlcommons.org/croissant.
    Dataset updated
    Sep 2, 2020
    Dataset provided by
    Harvard Dataverse
    Authors
    Bo Cowgill; Fabrizio Dell'Acqua; Sam Deng; Daniel Hsu; Nakul Verma; Augustin Chaintreau
    License

    https://dataverse.harvard.edu/api/datasets/:persistentId/versions/1.3/customlicense?persistentId=doi:10.7910/DVN/JAJ3CPhttps://dataverse.harvard.edu/api/datasets/:persistentId/versions/1.3/customlicense?persistentId=doi:10.7910/DVN/JAJ3CP

    Description

    This is a cleaned and merged version of the OECD's Programme for the International Assessment of Adult Competencies. The data contains individual person-measures of several basic skills including literacy, numeracy and critical thinking, along with extensive biographical details about each subject. PIAAC is essentially a standardized test taken by a representative sample of all OECD countries (approximately 200K individuals in total). We have found this data useful in studies of predictive algorithms and human capital, in part because of its high quality, size, number and quality of biographical features per subject and representativeness of the population at large.

  10. UMAP reveals cryptic population structure and phenotype heterogeneity in...

    • plos.figshare.com
    pdf
    Updated May 31, 2023
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    Alex Diaz-Papkovich; Luke Anderson-Trocmé; Chief Ben-Eghan; Simon Gravel (2023). UMAP reveals cryptic population structure and phenotype heterogeneity in large genomic cohorts [Dataset]. http://doi.org/10.1371/journal.pgen.1008432
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    pdfAvailable download formats
    Dataset updated
    May 31, 2023
    Dataset provided by
    PLOShttp://plos.org/
    Authors
    Alex Diaz-Papkovich; Luke Anderson-Trocmé; Chief Ben-Eghan; Simon Gravel
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Human populations feature both discrete and continuous patterns of variation. Current analysis approaches struggle to jointly identify these patterns because of modelling assumptions, mathematical constraints, or numerical challenges. Here we apply uniform manifold approximation and projection (UMAP), a non-linear dimension reduction tool, to three well-studied genotype datasets and discover overlooked subpopulations within the American Hispanic population, fine-scale relationships between geography, genotypes, and phenotypes in the UK population, and cryptic structure in the Thousand Genomes Project data. This approach is well-suited to the influx of large and diverse data and opens new lines of inquiry in population-scale datasets.

  11. f

    Comparison of observation and reaction times of ML-fit and derived bounds...

    • plos.figshare.com
    xls
    Updated Jun 1, 2023
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    Christian Doerr; Norbert Blenn; Piet Van Mieghem (2023). Comparison of observation and reaction times of ML-fit and derived bounds from Digg and Twitter dataset. [Dataset]. http://doi.org/10.1371/journal.pone.0064349.t001
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    xlsAvailable download formats
    Dataset updated
    Jun 1, 2023
    Dataset provided by
    PLOS ONE
    Authors
    Christian Doerr; Norbert Blenn; Piet Van Mieghem
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Comparison of observation and reaction times of ML-fit and derived bounds from Digg and Twitter dataset.

  12. d

    Supporting code and data for: Seasonality, density dependence and spatial...

    • search.dataone.org
    • dataverse.no
    • +1more
    Updated Sep 25, 2024
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    Nicolau, Pedro Guilherme; Ims, Rolf Anker; Sørbye, Sigrunn Holbek; Yoccoz, Nigel Gilles (2024). Supporting code and data for: Seasonality, density dependence and spatial population synchrony [Dataset]. http://doi.org/10.18710/OVWSAM
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    Dataset updated
    Sep 25, 2024
    Dataset provided by
    DataverseNO
    Authors
    Nicolau, Pedro Guilherme; Ims, Rolf Anker; Sørbye, Sigrunn Holbek; Yoccoz, Nigel Gilles
    Description

    This project corresponds to the scripts and data files necessary to replicate the analysis in the manuscript "Seasonality, density dependence and spatial population synchrony" by Pedro G. Nicolau, Rolf A. Ims, Sigrunn H. Sørbye & Nigel G. Yoccoz The folder structure is Data: important files used to reproduce the code. Raw files are .csv and processed files are in .rds Scripts: R scripts necessary for analysis, numbered by order of sequence (some with subnumbering). 0 contains the important functions to compute Bayesian R^2 and correlograms; 01 contains processing for 1; 03 contains processing for 3. Plots: diverse plots used (or not) in the manuscript; not needed for analysis

  13. N

    Data from: Integrating multimodal data sets into a mathematical framework to...

    • data.niaid.nih.gov
    Updated May 10, 2021
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    Johnson K; Howard GR; Morgan D; Brenner EA; Gardner AL; Durrett RE; Mo W; Al’Khafaji A; Sontag ED; Jarrett AM; Yankeelov TE; Brock A (2021). Integrating multimodal data sets into a mathematical framework to describe and predict therapeutic resistance in cancer [Dataset]. https://data.niaid.nih.gov/resources?id=gse154932
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    Dataset updated
    May 10, 2021
    Dataset provided by
    University of Texas at Austin
    Authors
    Johnson K; Howard GR; Morgan D; Brenner EA; Gardner AL; Durrett RE; Mo W; Al’Khafaji A; Sontag ED; Jarrett AM; Yankeelov TE; Brock A
    Description

    A significant challenge in the field of biomedicine is the development of methods to integrate the multitude of dispersed data sets into comprehensive frameworks to be used to generate optimal clinical decisions. Recent technological advances in single cell analysis allow for high-dimensional molecular characterization of cells and populations, but to date, few mathematical models have attempted to integrate measurements from the single cell scale with other data types. Here, we present a framework that actionizes static outputs from a machine learning model and leverages these as measurements of state variables in a dynamic mechanistic model of treatment response. We apply this framework to breast cancer cells to integrate single cell transcriptomic data with longitudinal population-size data. We demonstrate that the explicit inclusion of the transcriptomic information in the parameter estimation is critical for identification of the model parameters and enables accurate prediction of new treatment regimens. Inclusion of the transcriptomic data improves predictive accuracy in new treatment response dynamics with a concordance correlation coefficient (CCC) of 0.89 compared to a prediction accuracy of CCC = 0.79 without integration of the single cell RNA sequencing (scRNA-seq) data directly into the model calibration. To the best our knowledge, this is the first work that explicitly integrates single cell clonally-resolved transcriptome datasets with longitudinal treatment response data into a mechanistic mathematical model of drug resistance dynamics. We anticipate this approach to be a first step that demonstrates the feasibility of incorporating multimodal data sets into identifiable mathematical models to develop optimized treatment regimens from data. Single cell RNA-seq of MDA-MB-231 cell line with chemotherapy treatment

  14. Math Anxiety and Math Self-Efficacy: How Demographics Shape the Relationship...

    • figshare.com
    bin
    Updated Jan 14, 2025
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    Caterina Azzarello (2025). Math Anxiety and Math Self-Efficacy: How Demographics Shape the Relationship [Dataset]. http://doi.org/10.6084/m9.figshare.28196285.v1
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    binAvailable download formats
    Dataset updated
    Jan 14, 2025
    Dataset provided by
    figshare
    Figsharehttp://figshare.com/
    Authors
    Caterina Azzarello
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Dataset (de-identified and cleaned) containing data related to "MADEM" project. Math Anxiety and Math Self-Efficacy: How Demographics Shape the Relationship

  15. n

    Data from: Evaluating population viability and efficacy of conservation...

    • data.niaid.nih.gov
    • search.dataone.org
    • +1more
    zip
    Updated Dec 4, 2018
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    Sarah P. Saunders; Francesca J. Cuthbert; Elise F. Zipkin (2018). Evaluating population viability and efficacy of conservation management using integrated population models [Dataset]. http://doi.org/10.5061/dryad.j2906
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    zipAvailable download formats
    Dataset updated
    Dec 4, 2018
    Dataset provided by
    University of Minnesota
    Michigan State University
    Authors
    Sarah P. Saunders; Francesca J. Cuthbert; Elise F. Zipkin
    License

    https://spdx.org/licenses/CC0-1.0.htmlhttps://spdx.org/licenses/CC0-1.0.html

    Area covered
    Great Lakes
    Description

    Predicting population responses to environmental conditions or management scenarios is a fundamental challenge for conservation. Proper consideration of demographic, environmental and parameter uncertainties is essential for projecting population trends and optimal conservation strategies. We developed a coupled integrated population model-Bayesian population viability analysis to assess the (1) impact of demographic rates (survival, fecundity, immigration) on past population dynamics; (2) population viability 10 years into the future; and (3) efficacy of possible management strategies for the federally endangered Great Lakes piping plover Charadrius melodus population. Our model synthesizes long-term population survey, nest monitoring and mark–resight data, while accounting for multiple sources of uncertainty. We incorporated latent abundance of eastern North American merlins Falco columbarius, a primary predator of adult plovers, as a covariate on adult survival via a parallel state-space model, accounting for the influence of an imperfectly observed process (i.e. predation pressure) on population viability. Mean plover abundance increased from 18 pairs in 1993 to 75 pairs in 2016, but annual population growth (math formula) was projected to be 0.95 (95% CI 0.72–1.12), suggesting a potential decline to 67 pairs within 10 years. Without accounting for an expanding merlin population, we would have concluded that the plover population was projected to increase (math formula = 1.02; 95% CI 0.94–1.09) to 91 pairs by 2026. We compared four conservation scenarios: (1) no proposed management; (2) increased control of chick predators (e.g. Corvidae, Laridae, mammals); (3) increased merlin control; and (4) simultaneous chick predator and merlin control. Compared to the null scenario, chick predator control reduced quasi-extinction probability from 11.9% to 8.7%, merlin control more than halved (3.5%) the probability and simultaneous control reduced quasi-extinction probability to 2.6%. Synthesis and applications. Piping plover recovery actions should consider systematic predator control, rather than current ad hoc protocols, especially given the predicted increase in regional merlin abundance. This approach of combining integrated population models with Bayesian population viability analysis to identify limiting components of the population cycle and evaluate alternative management strategies for conservation decision-making shows great utility for aiding recovery of threatened populations.

  16. p

    Trends in Math Proficiency (2010-2022): La Canada High School vs. California...

    • publicschoolreview.com
    + more versions
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    Public School Review, Trends in Math Proficiency (2010-2022): La Canada High School vs. California vs. La Canada Unified School District [Dataset]. https://www.publicschoolreview.com/la-canada-high-school-profile
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    Dataset authored and provided by
    Public School Review
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Area covered
    La Cañada Unified School District, La Cañada Flintridge, California
    Description

    This dataset tracks annual math proficiency from 2010 to 2022 for La Canada High School vs. California and La Canada Unified School District

  17. Data from: FORECASTING POPULATION DENSITY AND WATER RESOURCES IN UZBEKISTAN...

    • zenodo.org
    Updated Apr 15, 2025
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    Jamshid Ozodovich Khasanov; Hayriniso Hayitboyeva; Jamshid Ozodovich Khasanov; Hayriniso Hayitboyeva (2025). FORECASTING POPULATION DENSITY AND WATER RESOURCES IN UZBEKISTAN FOR 2025–2030: A NUMERICAL APPROACH USING THE TRIDIAGONAL MATRIX ALGORITHM [Dataset]. http://doi.org/10.5281/zenodo.15221301
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    Dataset updated
    Apr 15, 2025
    Dataset provided by
    Zenodohttp://zenodo.org/
    Authors
    Jamshid Ozodovich Khasanov; Hayriniso Hayitboyeva; Jamshid Ozodovich Khasanov; Hayriniso Hayitboyeva
    Area covered
    Uzbekistan
    Description

    This study presents a mathematical model to forecast the dynamics of population density uuu and water resources vvv in Uzbekistan from 2025 to 2030, based on historical data from 2010 to 2024. A system of nonlinear partial differential equations (PDEs) is employed to describe the interaction between population growth and water consumption. The model is solved numerically using an implicit finite difference scheme and the tridiagonal matrix algorithm (TMA) with an iterative approach, using real data-derived initial conditions and a Gaussian distribution for the spatial representation of population and water resources. By 2030, Uzbekistan’s average population density may reach , while water resources decline to under a baseline scenario, or with a 0.5% reduction in depletion. The study recommends implementing water-saving technologies, such as drip irrigation, to ensure sustainable resource management in Uzbekistan.

  18. f

    Data from: Mathematica code that can produce the all figures from Population...

    • rs.figshare.com
    txt
    Updated May 31, 2023
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    Naoya Mitani; Akihiko Mougi (2023). Mathematica code that can produce the all figures from Population cycles emerging through multiple interaction types [Dataset]. http://doi.org/10.6084/m9.figshare.5414491.v1
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    txtAvailable download formats
    Dataset updated
    May 31, 2023
    Dataset provided by
    The Royal Society
    Authors
    Naoya Mitani; Akihiko Mougi
    License

    Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
    License information was derived automatically

    Description

    Mathematica code that can produce the all figures is shown.

  19. o

    Experimental datasets and scripts to analyze doxorubicin treatment effects...

    • explore.openaire.eu
    Updated Nov 23, 2021
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    Emily Y. Yang; Grant R. Howard; Amy Brock; Thomas E. Yankeelov; Guillermo Lorenzo (2021). Experimental datasets and scripts to analyze doxorubicin treatment effects on MCF7 cells via mechanistic modeling [Dataset]. http://doi.org/10.5281/zenodo.5722432
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    Dataset updated
    Nov 23, 2021
    Authors
    Emily Y. Yang; Grant R. Howard; Amy Brock; Thomas E. Yankeelov; Guillermo Lorenzo
    Description

    Experimental datasets and scripts to analyze doxorubicin treatment effects on MCF7 cells by using a mechanistic model.

  20. n

    Data and Rscripts from: An integrated experimental and mathematical approach...

    • data.niaid.nih.gov
    • datadryad.org
    zip
    Updated Apr 10, 2022
    + more versions
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    Barbara Joncour; William Nelson; Damie Pak; Ottar Bjornstad (2022). Data and Rscripts from: An integrated experimental and mathematical approach to inferring the role of food exploitation and interference interactions in shaping life history [Dataset]. http://doi.org/10.5061/dryad.1g1jwstzd
    Explore at:
    zipAvailable download formats
    Dataset updated
    Apr 10, 2022
    Dataset provided by
    Queen's University
    Pennsylvania State University
    Authors
    Barbara Joncour; William Nelson; Damie Pak; Ottar Bjornstad
    License

    https://spdx.org/licenses/CC0-1.0.htmlhttps://spdx.org/licenses/CC0-1.0.html

    Description

    Intraspecific interactions can occur through many ways but the mechanisms can be broadly categorized as food exploitation and interference interactions. Identifying how intraspecific interactions impact life history is crucial to accurately predict how population density and structure influence dynamics. However, disentangling the effects of interference interactions from exploitation using experiments, is challenging for most biological systems. Here we propose an approach that combines experiments with modeling to infer the pathways of intraspecific interactions in a system. First, a consumer-resource model is built without intraspecific interactions. Then, the model is parameterized by fitting it to life-history data from a first experiment in which food abundance was varied. Next, hypothesized scenarios of intraspecific interactions are incorporated into the model which is then used to predict life histories with increasing competitor density. Lastly, model predictions are compared against data from a second experiment which raised groups of competitors of different densities. This comparison allows us to infer the role of interference and exploitation in shaping life history. We demonstrated the approach using the smaller tea tortrix Adoxophyes honmai across a range of temperature. We investigated five scenarios of interactions that included exploitation and three pathways for interference through some effects either on energetics to represent changes in ingestion or activity, or on mortality to model deadly interactions, or on mortality and ingestion to model cannibalism. Overall, intraspecific interactions in tea tortrix are best explained by a high level of deadly interactions along with some level of interference that acts on energy such as escaping and blocking access to food. Deadly interactions increase with temperature while interference that acts on energy is strongest close to the optimal temperature for reproduction. Interestingly, exploitation is more important than interference at low competitor density. The combination of mathematical modeling and experimentation allowed us to mechanistically characterize the intraspecific interactions in tea tortrix in a way that is readily incorporated into population-level mathematical models. The primary value of this approach, however, is that it can be applied to a much wider range of taxa than is possible with pure experimental approaches. Methods We designed an approach to infer the most likely pathways of intraspecific interactions that shape life histories in a studied system. The approach is in four steps that weave together theory and experiments. We demonstrated the approach with the smaller tea tortrix moth (Adoxophies honmai). Step 1. Build base model We first built the base model which is the baseline for the theoretical framework used later to predict how different pathways of intraspecific interactions influence life histories. The base model is a consumer-resource cohort model that assumes no intraspecific interactions – no food exploitation and no interference interactions. As such, the base model describes solely how vital rates are impacted by changes in food abundance. Step 2. Parameterize base model (provided R script: Step2.r) Most model parameters can be directly estimated from independent data but a few remained unknown. Unknown parameters were estimated by fitting the base model to the observed life-history traits in the food experiment (FoodExperiment.csv). The food experiment raised individuals in the absence of intraspecific interactions and exposed them to a wide range of food abundance. Step 3. Incorporate intraspecific interactions in base model to predict their effects on life histories (provided R script: Step3.r) In this step, the parameterized base model was modified to incorporate several hypothesized scenarios of intraspecific interactions. For each scenario, we predicted how intraspecific interactions impact life-history traits and stage-structure distributions for groups of competitors. Step 4. Test model predictions using experiment To evaluate the support for each hypothesis, we compared model predictions with data from the competition experiment (CompetitionExperiment.csv). The competition experiment measured the impact of intraspecific interactions (i.e. competitor density) on life-history traits and on the stage-structure of groups of competitors. The comparison of life-history data from experiment with model predictions allowed to infer the role of interference interactions and the one of food exploitation in shaping life histories, as well as the functional dependencies for interference interactions in the studied system.

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Jonathan Chambers; Jonathan Chambers (2020). Hybrid gridded demographic data for the world, 1950-2020 [Dataset]. http://doi.org/10.5281/zenodo.3768003
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Hybrid gridded demographic data for the world, 1950-2020

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3 scholarly articles cite this dataset (View in Google Scholar)
ncAvailable download formats
Dataset updated
Apr 27, 2020
Dataset provided by
Zenodohttp://zenodo.org/
Authors
Jonathan Chambers; Jonathan Chambers
License

Attribution 4.0 (CC BY 4.0)https://creativecommons.org/licenses/by/4.0/
License information was derived automatically

Area covered
World
Description

This is a hybrid gridded dataset of demographic data for the world, given as 5-year population bands at a 0.5 degree grid resolution.

This dataset combines the NASA SEDAC Gridded Population of the World version 4 (GPWv4) with the ISIMIP Histsoc gridded population data and the United Nations World Population Program (WPP) demographic modelling data.

Demographic fractions are given for the time period covered by the UN WPP model (1950-2050) while demographic totals are given for the time period covered by the combination of GPWv4 and Histsoc (1950-2020)

Method - demographic fractions

Demographic breakdown of country population by grid cell is calculated by combining the GPWv4 demographic data given for 2010 with the yearly country breakdowns from the UN WPP. This combines the spatial distribution of demographics from GPWv4 with the temporal trends from the UN WPP. This makes it possible to calculate exposure trends from 1980 to the present day.

To combine the UN WPP demographics with the GPWv4 demographics, we calculate for each country the proportional change in fraction of demographic in each age band relative to 2010 as:

\(\delta_{year,\ country,age}^{\text{wpp}} = f_{year,\ country,age}^{\text{wpp}}/f_{2010,country,age}^{\text{wpp}}\)

Where:

- \(\delta_{year,\ country,age}^{\text{wpp}}\) is the ratio of change in demographic for a given age and and country from the UN WPP dataset.

- \(f_{year,\ country,age}^{\text{wpp}}\) is the fraction of population in the UN WPP dataset for a given age band, country, and year.

- \(f_{2010,country,age}^{\text{wpp}}\) is the fraction of population in the UN WPP dataset for a given age band, country for the year 2020.

The gridded demographic fraction is then calculated relative to the 2010 demographic data given by GPWv4.

For each subset of cells corresponding to a given country c, the fraction of population in a given age band is calculated as:

\(f_{year,c,age}^{\text{gpw}} = \delta_{year,\ country,age}^{\text{wpp}}*f_{2010,c,\text{age}}^{\text{gpw}}\)

Where:

- \(f_{year,c,age}^{\text{gpw}}\) is the fraction of the population in a given age band for given year, for the grid cell c.

- \(f_{2010,c,age}^{\text{gpw}}\) is the fraction of the population in a given age band for 2010, for the grid cell c.

The matching between grid cells and country codes is performed using the GPWv4 gridded country code lookup data and country name lookup table. The final dataset is assembled by combining the cells from all countries into a single gridded time series. This time series covers the whole period from 1950-2050, corresponding to the data available in the UN WPP model.

Method - demographic totals

Total population data from 1950 to 1999 is drawn from ISIMIP Histsoc, while data from 2000-2020 is drawn from GPWv4. These two gridded time series are simply joined at the cut-over date to give a single dataset covering 1950-2020.

The total population per age band per cell is calculated by multiplying the population fractions by the population totals per grid cell.

Note that as the total population data only covers until 2020, the time span covered by the demographic population totals data is 1950-2020 (not 1950-2050).

Disclaimer

This dataset is a hybrid of different datasets with independent methodologies. No guarantees are made about the spatial or temporal consistency across dataset boundaries. The dataset may contain outlier points (e.g single cells with demographic fractions >1). This dataset is produced on a 'best effort' basis and has been found to be broadly consistent with other approaches, but may contain inconsistencies which not been identified.

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